- •Contents
- •Contributors
- •Part I General Principles of Cell Death
- •1 Human Caspases – Apoptosis and Inflammation Signaling Proteases
- •1.1. Apoptosis and limited proteolysis
- •1.2. Caspase evolution
- •2. ACTIVATION MECHANISMS
- •2.2. The activation platforms
- •2.4. Proteolytic maturation
- •3. CASPASE SUBSTRATES
- •4. REGULATION BY NATURAL INHIBITORS
- •REFERENCES
- •2 Inhibitor of Apoptosis Proteins
- •2. CELLULAR FUNCTIONS AND PHENOTYPES OF IAP
- •3. IN VIVO FUNCTIONS OF IAP FAMILY PROTEINS
- •4. SUBCELLULAR LOCATIONS OF IAP
- •8. IAP–IAP INTERACTIONS
- •10. ENDOGENOUS ANTAGONISTS OF IAP
- •11. IAPs AND DISEASE
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •2.1. The CD95 (Fas/APO-1) system
- •2.1.1. CD95 and CD95L: discovery of the first direct apoptosis-inducing receptor-ligand system
- •2.1.2. Biochemistry of CD95 apoptosis signaling
- •2.2. The TRAIL (Apo2L) system
- •3.1. The TNF system
- •3.1.1. Biochemistry of TNF signal transduction
- •3.1.2. TNF and TNF blockers in the clinic
- •3.2. The DR3 system
- •4. THE DR6 SYSTEM
- •6. CONCLUDING REMARKS AND OUTLOOK
- •SUGGESTED READINGS
- •4 Mitochondria and Cell Death
- •1. INTRODUCTION
- •2. MITOCHONDRIAL PHYSIOLOGY
- •3. THE MITOCHONDRIAL PATHWAY OF APOPTOSIS
- •9. CONCLUSIONS
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •3. INHIBITING APOPTOSIS
- •4. INHIBITING THE INHIBITORS
- •6. THE BCL-2 FAMILY AND CANCER
- •SUGGESTED READINGS
- •6 Endoplasmic Reticulum Stress Response in Cell Death and Cell Survival
- •1. INTRODUCTION
- •2. THE ESR IN YEAST
- •3. THE ESR IN MAMMALS
- •4. THE ESR AND CELL DEATH
- •5. THE ESR IN DEVELOPMENT AND TISSUE HOMEOSTASIS
- •6. THE ESR IN HUMAN DISEASE
- •7. CONCLUSION
- •7 Autophagy – The Liaison between the Lysosomal System and Cell Death
- •1. INTRODUCTION
- •2. AUTOPHAGY
- •2.2. Physiologic functions of autophagy
- •2.3. Autophagy and human pathology
- •3. AUTOPHAGY AND CELL DEATH
- •3.1. Autophagy as anti–cell death mechanism
- •3.2. Autophagy as a cell death mechanism
- •3.3. Molecular players of the autophagy–cell death cross-talk
- •4. AUTOPHAGY, CELLULAR DEATH, AND CANCER
- •5. CONCLUDING REMARKS AND PENDING QUESTIONS
- •SUGGESTED READINGS
- •8 Cell Death in Response to Genotoxic Stress and DNA Damage
- •1. TYPES OF DNA DAMAGE AND REPAIR SYSTEMS
- •2. DNA DAMAGE RESPONSE
- •2.2. Transducers
- •2.3. Effectors
- •4. CHROMATIN MODIFICATIONS
- •5. CELL CYCLE CHECKPOINT REGULATION
- •6. WHEN REPAIR FAILS: SENESCENCE VERSUS APOPTOSIS
- •6.1. DNA damage response and the induction of apoptosis
- •6.2. p53-independent mechanisms of apoptosis
- •6.3. DNA damage response and senescence induction
- •7. DNA DAMAGE FROM OXIDATIVE STRESS
- •SUGGESTED READINGS
- •9 Ceramide and Lipid Mediators in Apoptosis
- •1. INTRODUCTION
- •3.1. Basic cell signaling often involves small molecules
- •3.2. Sphingolipids are cell-signaling molecules
- •3.2.1. Ceramide induces apoptosis
- •3.2.2. Ceramide accumulates during programmed cell death
- •3.2.3. Inhibition of ceramide production alters cell death signaling
- •4.1. Ceramide is generated through SM hydrolysis
- •4.3. aSMase can be activated independently of extracellular receptors to regulate apoptosis
- •4.4. Controversial aspects of the role of aSMase in apoptosis
- •4.5. De novo ceramide synthesis regulates programmed cell death
- •4.6. p53 and Bcl-2–like proteins are connected to de novo ceramide synthesis
- •4.7. The role and regulation of de novo synthesis in ceramide-mediated cell death is poorly understood
- •5. CONCLUDING REMARKS AND FUTURE DIRECTIONS
- •5.1. Who? (Which enzyme?)
- •5.2. What? (Which ceramide?)
- •5.3. Where? (Which compartment?)
- •5.4. When? (At what steps?)
- •5.5. How? (Through what mechanisms?)
- •5.6. What purpose?
- •6. SUMMARY
- •SUGGESTED READINGS
- •1. General Introduction
- •1.1. Cytotoxic lymphocytes and apoptosis
- •2. CYTOTOXIC GRANULES AND GRANULE EXOCYTOSIS
- •2.1. Synthesis and loading of the cytotoxic granule proteins into the secretory granules
- •2.2. The immunological synapse
- •2.3. Secretion of granule proteins
- •2.4. Uptake of proapoptotic proteins into the target cell
- •2.5. Activation of death pathways by granzymes
- •3. GRANULE-BOUND CYTOTOXIC PROTEINS
- •3.1. Perforin
- •3.2. Granulysin
- •3.3. Granzymes
- •3.3.1. GrB-mediated apoptosis
- •3.3.2. GrA-mediated cell death
- •3.3.3. Orphan granzyme-mediated cell death
- •5. CONCLUSIONS
- •REFERENCES
- •Part II Cell Death in Tissues and Organs
- •1.1. Death by trophic factor deprivation
- •1.2. Key molecules regulating neuronal apoptosis during development
- •1.2.1. Roles of caspases and Apaf-1 in neuronal cell death
- •1.2.2. Role of Bcl-2 family members in neuronal cell death
- •1.3. Signal transduction from neurotrophins and neurotrophin receptors
- •1.3.1. Signals for survival
- •1.3.2. Signals for death
- •2.1. Apoptosis in neurodegenerative diseases
- •2.1.4. Amyotrophic lateral sclerosis
- •2.2. Necrotic cell death in neurodegenerative diseases
- •2.2.1. Calpains
- •2.2.2. Cathepsins
- •3. CONCLUSIONS
- •ACKNOWLEDGMENT
- •SUGGESTED READINGS
- •ACKNOWLEDGMENT
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •5. S-NITROSYLATION OF PARKIN
- •7. POTENTIAL TREATMENT OF EXCESSIVE NMDA-INDUCED Ca2+ INFLUX AND FREE RADICAL GENERATION
- •8. FUTURE THERAPEUTICS: NITROMEMANTINES
- •9. CONCLUSIONS
- •Acknowledgments
- •SUGGESTED READINGS
- •3. MITOCHONDRIAL PERMEABILITY TRANSITION ACTIVATED BY Ca2+ AND OXIDATIVE STRESS
- •4.1. Mitochondrial apoptotic pathways
- •4.2. Bcl-2 family proteins
- •4.3. Caspase-dependent apoptosis
- •4.4. Caspase-independent apoptosis
- •4.5. Calpains in ischemic neural cell death
- •5. SUMMARY
- •ACKNOWLEDGMENTS
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •2. HISTORICAL ANTECEDENTS
- •7.1. Activation of p21 waf1/cip1: Targeting extrinsic and intrinsic pathways to death
- •8. CONCLUSION
- •ACKNOWLEDGMENTS
- •REFERENCES
- •16 Apoptosis and Homeostasis in the Eye
- •1.1. Lens
- •1.2. Retina
- •2. ROLE OF APOPTOSIS IN DISEASES OF THE EYE
- •2.1. Glaucoma
- •2.2. Age-related macular degeneration
- •4. APOPTOSIS AND OCULAR IMMUNE PRIVILEGE
- •5. CONCLUSIONS
- •SUGGESTED READINGS
- •17 Cell Death in the Inner Ear
- •3. THE COCHLEA IS THE HEARING ORGAN
- •3.1. Ototoxic hair cell death
- •3.2. Aminoglycoside-induced hair cell death
- •3.3. Cisplatin-induced hair cell death
- •3.4. Therapeutic strategies to prevent hair cell death
- •3.5. Challenges to studies of hair cell death
- •4. SPIRAL GANGLION NEURON DEATH
- •4.1. Neurotrophic support from sensory hair cells and supporting cells
- •4.2. Afferent activity from hair cells
- •4.3. Molecular manifestations of spiral ganglion neuron death
- •4.4. Therapeutic interventions to prevent SGN death
- •ACKNOWLEDGMENTS
- •SUGGESTED READINGS
- •18 Cell Death in the Olfactory System
- •1. Introduction
- •2. Anatomical Aspects
- •3. Life and Death in the Olfactory System
- •3.1. Olfactory epithelium
- •3.2. Olfactory bulb
- •REFERENCES
- •1. Introduction
- •3.1. Beta cell death in the development of T1D
- •3.2. Mechanisms of beta cell death in type 1 diabetes
- •3.2.1. Apoptosis signaling pathways downstream of death receptors and inflammatory cytokines
- •3.2.2. Oxidative stress
- •3.3. Mechanisms of beta cell death in type 2 diabetes
- •3.3.1. Glucolipitoxicity
- •3.3.2. Endoplasmic reticulum stress
- •5. SUMMARY
- •Acknowledgments
- •REFERENCES
- •20 Apoptosis in the Physiology and Diseases of the Respiratory Tract
- •1. APOPTOSIS IN LUNG DEVELOPMENT
- •2. APOPTOSIS IN LUNG PATHOPHYSIOLOGY
- •2.1. Apoptosis in pulmonary inflammation
- •2.2. Apoptosis in acute lung injury
- •2.3. Apoptosis in chronic obstructive pulmonary disease
- •2.4. Apoptosis in interstitial lung diseases
- •2.5. Apoptosis in pulmonary arterial hypertension
- •2.6. Apoptosis in lung cancer
- •SUGGESTED READINGS
- •21 Regulation of Cell Death in the Gastrointestinal Tract
- •1. INTRODUCTION
- •2. ESOPHAGUS
- •3. STOMACH
- •4. SMALL AND LARGE INTESTINE
- •5. LIVER
- •6. PANCREAS
- •7. SUMMARY AND CONCLUDING REMARKS
- •SUGGESTED READINGS
- •22 Apoptosis in the Kidney
- •1. NORMAL KIDNEY STRUCTURE AND FUNCTION
- •3. APOPTOSIS IN ADULT KIDNEY DISEASE
- •4. REGULATION OF APOPTOSIS IN KIDNEY CELLS
- •4.1. Survival factors
- •4.2. Lethal factors
- •4.2.1. TNF superfamily cytokines
- •4.2.2. Other cytokines
- •4.2.3. Glucose
- •4.2.4. Drugs and xenobiotics
- •4.2.5. Ischemia-reperfusion and sepsis
- •5. THERAPEUTIC APPROACHES
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •2. APOPTOSIS IN THE NORMAL BREAST
- •2.1. Occurrence and role of apoptosis in the developing breast
- •2.2.2. Death ligands and death receptor pathway
- •2.2.4. LIF-STAT3 proapoptotic signaling
- •2.2.5. IGF survival signaling
- •2.2.6. Regulation by adhesion
- •2.2.7. PI3K/AKT pathway: molecular hub for survival signals
- •2.2.8. Downstream regulators of apoptosis: the BCL-2 family members
- •3. APOPTOSIS IN BREAST CANCER
- •3.1. Apoptosis in breast tumorigenesis and cancer progression
- •3.2. Molecular dysregulation of apoptosis in breast cancer
- •3.2.1. Altered expression of death ligands and their receptors in breast cancer
- •3.2.2. Deregulation of prosurvival growth factors and their receptors
- •3.2.3. Alterations in cell adhesion and resistance to anoikis
- •3.2.4. Enhanced activation of the PI3K/AKT pathway in breast cancer
- •3.2.5. p53 inactivation in breast cancer
- •3.2.6. Altered expression of BCL-2 family of proteins in breast cancer
- •5. CONCLUSION
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •2. DETECTING CELL DEATH IN THE FEMALE GONADS
- •4. APOPTOSIS AND FEMALE REPRODUCTIVE AGING
- •6. CONCLUDING REMARKS
- •REFERENCES
- •25 Apoptotic Signaling in Male Germ Cells
- •1. INTRODUCTION
- •3.1. Murine models
- •3.2. Primate models
- •3.3. Pathways of caspase activation and apoptosis
- •3.4. Apoptotic signaling in male germ cells
- •5. P38 MITOGEN-ACTIVATED PROTEIN KINASE (MAPK) AND NITRIC OXIDE (NO)–MEDIATED INTRINSIC PATHWAY SIGNALING CONSTITUTES A CRITICAL COMPONENT OF APOPTOTIC SIGNALING IN MALE GERM CELLS AFTER HORMONE DEPRIVATION
- •11. CONCLUSIONS AND PERSPECTIVES
- •REFERENCES
- •26 Cell Death in the Cardiovascular System
- •1. INTRODUCTION
- •2. CELL DEATH IN THE VASCULATURE
- •2.1. Apoptosis in the developing blood vessels
- •2.2. Apoptosis in atherosclerosis
- •2.2.1. Vascular smooth muscle cells
- •2.2.2. Macrophages
- •2.2.3. Regulation of apoptosis in atherosclerosis
- •2.2.4. Necrosis and autophagy in atherosclerosis
- •3. CELL DEATH IN THE MYOCARDIUM
- •3.1. Cell death in myocardial infarction
- •3.1.1. Apoptosis in myocardial infarction
- •3.1.2. Necrosis in myocardial infarction
- •3.1.3. Autophagy in myocardial infarction
- •3.2. Cell death in heart failure
- •3.2.1. Apoptosis in heart failure
- •3.2.2. Necrosis in heart failure
- •3.2.3. Autophagy in heart failure
- •4. CONCLUDING REMARKS
- •ACKNOWLEDGMENTS
- •REFERENCES
- •27 Cell Death Regulation in Muscle
- •1. INTRODUCTION TO MUSCLE
- •1.1. Skeletal muscle adaptation to endurance training
- •1.2. Myonuclear domains
- •2. MITOCHONDRIALLY MEDIATED APOPTOSIS IN MUSCLE
- •2.1. Skeletal muscle apoptotic susceptibility
- •4. APOPTOSIS IN MUSCLE DURING AGING AND DISEASE
- •4.1. Aging
- •4.2. Type 2 diabetes mellitus
- •4.3. Cancer cachexia
- •4.4. Chronic heart failure
- •6. CONCLUSION
- •SUGGESTED READINGS
- •28 Cell Death in the Skin
- •1. INTRODUCTION
- •2. CELL DEATH IN SKIN HOMEOSTASIS
- •2.1. Cornification and apoptosis
- •2.2. Death receptors in the skin
- •3. CELL DEATH IN SKIN PATHOLOGY
- •3.1. Sunburn
- •3.2. Skin cancer
- •3.3. Necrolysis
- •3.4. Pemphigus
- •3.5. Eczema
- •3.6. Graft-versus-host disease
- •4. CONCLUDING REMARKS AND PERSPECTIVES
- •ACKNOWLEDGMENTS
- •SUGGESTED READINGS
- •29 Apoptosis and Cell Survival in the Immune System
- •2.1. Survival of early hematopoietic progenitors
- •2.2. Sizing of the T-cell population
- •2.2.1. Establishing central tolerance
- •2.2.2. Peripheral tolerance
- •2.2.3. Memory T cells
- •2.3. Control of apoptosis in B-cell development
- •2.3.1. Early B-cell development
- •2.3.2. Deletion of autoreactive B cells
- •2.3.3. Survival and death of activated B cells
- •3. IMPAIRED APOPTOSIS AND LEUKEMOGENESIS
- •4. CONCLUSIONS
- •ACKNOWLEDGMENTS
- •REFERENCES
- •30 Cell Death Regulation in the Hematopoietic System
- •1. INTRODUCTION
- •2. HEMATOPOIETIC STEM CELLS
- •4. ERYTHROPOIESIS
- •5. MEGAKARYOPOIESIS
- •6. GRANULOPOIESIS
- •7. MONOPOIESIS
- •8. CONCLUSION
- •ACKNOWLEDGMENTS
- •REFERENCES
- •31 Apoptotic Cell Death in Sepsis
- •1. INTRODUCTION
- •2. HOST INFLAMMATORY RESPONSE TO SEPSIS
- •3. CLINICAL OBSERVATIONS OF CELL DEATH IN SEPSIS
- •3.1. Sepsis-induced apoptosis
- •3.2. Necrotic cell death in sepsis
- •4.1. Central role of apoptosis in sepsis mortality: immune effector cells and gut epithelium
- •4.2. Apoptotic pathways in sepsis-induced immune cell death
- •4.3. Investigations implicating the extrinsic apoptotic pathway in sepsis
- •4.4. Investigations implicating the intrinsic apoptotic pathway in sepsis
- •5. THE EFFECT OF APOPTOSIS ON THE IMMUNE SYSTEM
- •5.1. Cellular effects of an increased apoptotic burdens
- •5.2. Network effects of selective loss of immune cell types
- •5.3. Studies of immunomodulation by apoptotic cells in other fields
- •7. CONCLUSION
- •REFERENCES
- •32 Host–Pathogen Interactions
- •1. INTRODUCTION
- •2. FROM THE PATHOGEN PERSPECTIVE
- •2.1. Commensals versus pathogens
- •2.2. Pathogen strategies to infect the host
- •3. HOST DEFENSE
- •3.1. Antimicrobial peptides
- •3.2. PRRs and inflammation
- •3.2.1. TLRs
- •3.2.2. NLRs
- •3.2.3. The Nod signalosome
- •3.2.4. The inflammasome
- •3.3. Cell death
- •3.3.1. Apoptosis and pathogen clearance
- •3.3.2. Pyroptosis
- •3.2.3. Caspase-independent cell death
- •3.2.4. Autophagy and autophagic cell death
- •4. CONCLUSIONS
- •REFERENCES
- •Part III Cell Death in Nonmammalian Organisms
- •1. PHENOTYPE AND ASSAYS OF YEAST APOPTOSIS
- •2.1. Pheromone-induced cell death
- •2.1.1. Colony growth
- •2.1.2. Killer-induced cell death
- •3. EXTERNAL STIMULI THAT INDUCE APOPTOSIS IN YEAST
- •4. THE GENETICS OF YEAST APOPTOSIS
- •5. PROGRAMMED AND ALTRUISTIC AGING
- •SUGGESTED READINGS
- •34 Caenorhabditis elegans and Apoptosis
- •1. Overview
- •2. KILLING
- •3. SPECIFICATION
- •4. EXECUTION
- •4.1. DNA degradation
- •4.2. Mitochondrial elimination
- •4.3. Engulfment
- •5. SUMMARY
- •SUGGESTED READINGS
- •35 Apoptotic Cell Death in Drosophila
- •2. DROSOPHILA CASPASES AND PROXIMAL REGULATORS
- •6. CLOSING COMMENTS
- •SUGGESTED READINGS
- •36 Analysis of Cell Death in Zebrafish
- •1. INTRODUCTION
- •2. WHY USE ZEBRAFISH TO STUDY CELL DEATH?
- •2.2. Molecular techniques to rapidly assess gene function in embryos
- •2.2.1. Studies of gene function using microinjections into early embryos
- •2.2.2. In situ hybridization and immunohistochemistry
- •2.3. Forward genetic screening
- •2.4. Drug and small-molecule screening
- •2.5. Transgenesis
- •2.6. Targeted knockouts
- •3.1. Intrinsic apoptosis
- •3.2. Extrinsic apoptosis
- •3.3. Chk-1 suppressed apoptosis
- •3.4. Anoikis
- •3.5. Autophagy
- •3.6. Necrosis
- •4. DEVELOPMENTAL CELL DEATH IN ZEBRAFISH EMBRYOS
- •5. THE P53 PATHWAY
- •6. PERSPECTIVES AND FUTURE DIRECTIONS
- •SUGGESTED READING
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Cell death
~ 50% |
~ 100% |
~50% ~100% |
Neuronal population
Target
Normal |
Target |
Partial target |
development |
ablated |
ablation |
1.2. Key molecules regulating neuronal apoptosis during development
The breakthrough for understanding the mechanism of neuronal cell death induced by trophic factor deprivation came from the studies in the nematode Caenorhabditis elegans. During C. elegans development, of 1,090 somatic cells (of which 302 are neurons and 56 are glial cells), 131 undergo programmed cell death. The death of these 131 cells is predetermined by their genetic lineages and occurs at predictable times during the development of each individual worm. Thus programmed cell death in C. elegans is a form of cellular suicide. In contrast, there is no evidence to indicate that the death of mammalian neurons occurring during the period when they are establishing synaptic connection is predetermined. As discussed before, the verdict regarding which neuron will die and which will live is reached through a competition process during which neurons compete for establishing the correct synaptic connection and trophic factor availability. Therefore, mammalian neurons that die during the period of establishing synaptic connection are not predetermined by their lineage; rather, they are induced as a result of lacking trophic factor support.
The central components of the programmed cell death machinery in C. elegans are three CED proteins: CED-3, CED-4, and CED-9. In this cellular suicide machinery, CED-9 functions as an inhibitor of apoptosis by preventing CED-4 from interacting with CED- 3, whereas CED-4 is a proapoptotic adaptor molecule
required for the activation of CED- 3, a cysteine protease responsible for the execution of cell death program.
In mammals, the homologs of CED-9,
CED-4, and CED-3 are members of the Bcl-2 family, Apaf-1/NOD-like receptor family, and caspase family, respectively. The demonstration that neuronal cell death induced by the lack of trophic factors can be prevented by overexpression of Bcl-2 or by expression of a virally encoded caspase inhibitor crmA provided the first insights into the role of apoptosis in regulating neuronal cell death. Thus, surprisingly, although mammalian neuronal cell death induced by trophic factor deprivation occurs through a stochastic process of competition, they are regulated by a cellular suicide machinery that is very likely to share the same evolutionary origin as that of programmed cell
death in C. elegans that is predetermined by their cell lineages during development. Next we review the mechanisms by which neuronal cell death is regulated and executed.
1.2.1. Roles of caspases and Apaf-1 in neuronal cell death
Multiple virally encoded caspase inhibitors, such as crmA and p35, provided useful tools for demonstrating the roles of apoptosis in a variety of cellular systems, including neurons. The expression of crmA (a caspase inhibitor encoded by cowpox virus) in chicken dorsal root ganglion (DRG) neurons or p35 (a caspase inhibitor encoded by baculovirus) in rat sympathetic neurons inhibits apoptosis on NGF deprivation in culture. Peptide-based chemical inhibitors derived from the preferred caspase cleavage sites in their substrates also block neuronal cell death in vitro. Newborn DRG neurons from mutant caspase-1 (C285G) transgenic mice and caspase-1–/– mice are resistant to trophic factor withdrawal-induced apoptosis in culture. However, it has been challenging to demonstrate the precise roles of caspases in regulating neuronal cell death during the period of establishing synaptic connection in vivo because until now, no caspase-deficient mice have shown a significant defect in the elimination of developing postmitotic neurons while establishing synaptic connections in vivo, despite the establishment of almost all caspase mutant mice.
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Genetic analysis of caspase-deficient mice demonstrated the roles of caspase-3 and caspase-9 in mediating apoptosis of mitotically active neural progenitor cells or immature neurons in the forebrain during early developmental stages before the formation of synaptic connections. Caspase-3–/– mice in mixed 129/SvJ and C57BL/6 background die perinatally with a variety of hyperplasia and disorganized cell deployment in the brain, similar to that of caspase-9–/– mice. Ectopic cell masses appear in the cerebral cortex, hippocampus, and striatum, whereas the incidence of pyknosis, a prominent feature of apoptosis during normal neurogenesis in the periventricular zone, is significantly reduced in caspase- 3–/– and caspase-9–/– mice. Certain mutant phenotypes of caspase-deficient mice, however, can have a strong dependency on genetic background (e.g., caspase-3–/– mice are viable and developmentally normal in C57BL/6 background). The interaction of genetic background with a specific caspase deficiency might be a subject of interest for future studies.
The death of newborn neural precursor cells in the periventricular zone as those impaired in caspase-3–/– and caspase-9–/– mice, however, occurs before the time of establishing synaptic connection because neurons are born in the periventricular zone and the neuronal connections are only made after their migration to the appropriate layers of the brains. The regulation of neuronal cell death in population in vivo before the formation of synaptic connections may differ from the well-known target-dependent type of naturally occurring neuronal death that occurs when synaptic connections are being formed. Interestingly, in contrast to the striking perturbations in the morphology observed in the more rostral, mitotically active regions of the brain of caspase-3–/– and caspase-9–/– embryos, the spinal cord, brainstem, and peripheral ganglia in these caspase mutant mice appear completely normal at both embryonic and postnatal stages. Developing postmitotic neurons at these regions ultimately undergo normal number of neuronal loss, despite the temporal delay in cell death. Thus, although the studies using in vitro model of trophic factor–dependent neuronal cell death predict an important role of caspases in apoptosis, there is a general lack of evidence for the involvement of any specific caspase in postmitotic neuronal death in vivo. There might be a number of reasons to explain this. First of all, it is possible that the constitutive loss of a caspase in the germline might lead to upregulated expression of other caspases in the mutant background, which might compensate for the loss of a single caspase. This has been demonstrated for caspase- 3–/–, caspase-7–/–, and caspase-9–/– mice. However, a
compensatory expression of other caspases makes it difficult to explain the lack of obvious deficiency in the death of all neurons since the majority of late-stage caspase-3–/–; caspase-7–/– double knockout embryos, which lack both major downstream caspases required for the execution of apoptosis, did not show abnormality in brain morphology. It will be interesting to examine whether conditional caspase mutant mice that are specifically deficient for a caspase in neuronal lineage or in a temporally regulated manner show a defect in neuronal cell death induced by trophic factor deprivation. On the other hand, it is possible that in caspase-deficient mice, additional caspase-independent cell death mechanism is activated to compensate for the loss of caspase deficiency. In fact, although many populations of developing postmitotic neurons are able to exhibit normal amount of cell death in the absence of either caspase-3 or caspase-9, the morphology of these degenerating neurons differs from the more typical apoptotic cell death, and the kinetics of their degeneration is delayed. Ultrastructural analysis of degenerating spinal cord neurons from E14.5 caspase-3–/– embryos revealed the presence of extensive cytoplasmic vacuoles that are not usually detected in apoptotic cells and that are seldom observed in dying neurons of control embryos. A delay in the degeneration of caspase-deficient neurons suggests that caspase-mediated neuronal cell death is more efficient than caspase-independent cell death.
Similar to caspase-9–/– mice, regardless of genetic background, apaf-1–/– mice also display a massive overgrowth of cells in the brain (exencephaly) that was attributed in part to the reduced cell death of both immature neurons and dividing neuronal precursor cells and that is consistent with the role of apaf-1 being an activator of caspase-9. In mature neurons, however, Apaf-1 was found to be dispensable for neuronal cell death caused by the lack of trophic signaling input from TrkA deficiency or synaptic activity from Munc-18 deficiency in vivo. Many populations of postmitotic, “targetdependent” neurons, including spinal and cranial motor neurons, spinal interneurons, DRG sensory neurons, and sympathetic neurons in the SCG, undergo a quantitatively normal amount of cell death in the absence of apaf-1, although caspase-3 activation is blocked. The degenerating apaf-1–/– neurons show numerous vacuoles atypical for apoptosis, suggesting the activation of a back-up cell death mechanism in developing neurons when caspase activation is inhibited. Thus it is possible that in postmitotic mature neurons that are deficient for caspase activation mechanism, the lack of trophic factor support might trigger an active form of cell death mediated through a caspase-independent mechanism.
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1.2.2. Role of Bcl-2 family members in neuronal cell death
The Bcl-2 family includes both antiapoptotic and proapoptotic proteins that contain one or more Bcl- 2 homology (BH) domains. Bcl-2 and Bcl-xl are two major antiapoptotic members of the Bcl-2 family. Overexpression of Bcl-2 prevents apoptosis of sympathetic neurons induced by NGF deprivation in culture. Transgenic mice expressing Bcl-2 in the nervous system show reduced neuronal cell death during developmental hypertrophy of the brain and increased numbers of facial motor neurons and retinal ganglion cells. It is interesting, however, to compare the neuronal phenotypes of the mice over-expressing Bcl-2 with that of caspase-9–/– and apaf-1–/– mice: although they all show reductions in neuronal cell death and increases in neuronal cell numbers, over-expression of Bcl-2 in the brains results in larger brains with more neurons but otherwise normal brain morphology, whereas caspase-9 deficiency or apaf-1 deficiency leads to severe defects in brain morphogenesis. Given the brain morphology of Bcl-2 transgenic mice, one might argue that a simple reduction in neuronal cell death is not sufficient to alter brain morphogenesis. By the same reasoning, it is possible that caspase-9 and apaf-1 have additional functions unrelated to regulation of apoptosis, a possibility that should be examined in the future.
The expression of Bcl-2 is high in the central nervous system during development and downregulated after birth; however, the expression of Bcl-2 is retained in neurons of the peripheral nervous system throughout life. Although the prenatal development of the nervous system in Bcl-2–/– mice is normal, there is a subsequent loss of motor, sensory, and sympathetic neurons after birth, suggesting that Bcl-2 is crucial for the maintenance of specific populations of neurons during the early postnatal period.
The normal development of nervous system in Bcl- 2–/– mice might be attributed to the redundancy in the functions served by other members of the Bcl-2 family. Bcl-xl appears to be a good candidate because it is also expressed in the developing brain. Unlike Bcl-2, whose expression decreases after birth, Bcl-xl expression is retained in the neurons of the adult central nervous system. Bcl-xl–/– mice die around embryonic day 13, with extensive apoptotic cell death in postmitotic differentiating neurons of the developing brain, spinal cord, and dorsal root ganglia. Striking deficiency of neuronal survival in Bcl-xl–/– mice indicates its pivotal role in maintaining neuronal survival.
Mcl-1 is another important antiapoptotic Bcl-2 family member. Mcl-1–/– mice die very early in embryonic development around embryonic day 3.5, which is the most severe phenotype among all the known mutant mice in the members of antiapoptotic Bcl-2 family. Robust expression of Mcl-1 is present in both proliferating neuronal progenitor cells and postmitotic neurons during brain development. Mcl-1 deficiency, especially in neuronal lineage, results in the apoptotic death of both Nestin+ neural progenitors and Tuj1+ newly committed neurons. During the development of the nervous system, proapoptotic Bax and bid are expressed in neural precursor cells within the ventricular zone, with the expression of Bax peaking at E12 to E15, corresponding to the period of early neurogenesis when widespread apoptosis of neural precursors occurs in the Mcl-1 conditional mutants. Although both Mcl-1 and Bcl-xl have been shown to block Baxand Bak-mediated apoptosis, Bcl-xl is expressed at very low levels in the neural precursor populations, and apoptosis is observed in more mature neuronal populations in the Bcl-xl–/– mutant mice at E12.5. Therefore, Mcl-1 plays an important role in regulating the survival of neurons during the transition from the progenitor to the postmitotic period.
Antiapoptotic members of the Bcl-2 family act as antagonists for the proapoptotic members of Bcl-2 family. Bax is a key member of proapoptotic Bcl-2 family in regulating neuronal apoptosis. Wild-type neonatal sympathetic superior cervical ganglion neurons and facial motor neurons express Bax mRNA at a time when these neuronal populations are susceptible to growth factor deprivation in vivo. Deletion of Bax results in profound effects on the survival of many kinds of neurons. Bax–/– neonatal sympathetic neurons and facial motor neurons survive nerve growth factor deprivation in culture and disconnection from their targets by axotomy in vivo, respectively. Bax–/– mice have increased neuronal numbers in the superior cervical ganglia and facial nuclei. Thus the activation of Bax may be a critical event for neuronal cell death induced by trophic factor withdrawal, as well as injury. Further studies examined the fate of the excess rescued neurons in postnatal Bax–/– mice during muscle target innervation and revealed that although initially all of the motor neurons, including those rescued by Bax deletion, are able to project to and innervate targets, only a subpopulation can grow and retain target contacts postnatally. Treatment with exogenous trophic factor can reverse their atrophy and promote regrowth of the axons of the excess surviving motor neurons, suggesting that even after their developmental role in