- •Contents
- •Contributors
- •Part I General Principles of Cell Death
- •1 Human Caspases – Apoptosis and Inflammation Signaling Proteases
- •1.1. Apoptosis and limited proteolysis
- •1.2. Caspase evolution
- •2. ACTIVATION MECHANISMS
- •2.2. The activation platforms
- •2.4. Proteolytic maturation
- •3. CASPASE SUBSTRATES
- •4. REGULATION BY NATURAL INHIBITORS
- •REFERENCES
- •2 Inhibitor of Apoptosis Proteins
- •2. CELLULAR FUNCTIONS AND PHENOTYPES OF IAP
- •3. IN VIVO FUNCTIONS OF IAP FAMILY PROTEINS
- •4. SUBCELLULAR LOCATIONS OF IAP
- •8. IAP–IAP INTERACTIONS
- •10. ENDOGENOUS ANTAGONISTS OF IAP
- •11. IAPs AND DISEASE
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •2.1. The CD95 (Fas/APO-1) system
- •2.1.1. CD95 and CD95L: discovery of the first direct apoptosis-inducing receptor-ligand system
- •2.1.2. Biochemistry of CD95 apoptosis signaling
- •2.2. The TRAIL (Apo2L) system
- •3.1. The TNF system
- •3.1.1. Biochemistry of TNF signal transduction
- •3.1.2. TNF and TNF blockers in the clinic
- •3.2. The DR3 system
- •4. THE DR6 SYSTEM
- •6. CONCLUDING REMARKS AND OUTLOOK
- •SUGGESTED READINGS
- •4 Mitochondria and Cell Death
- •1. INTRODUCTION
- •2. MITOCHONDRIAL PHYSIOLOGY
- •3. THE MITOCHONDRIAL PATHWAY OF APOPTOSIS
- •9. CONCLUSIONS
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •3. INHIBITING APOPTOSIS
- •4. INHIBITING THE INHIBITORS
- •6. THE BCL-2 FAMILY AND CANCER
- •SUGGESTED READINGS
- •6 Endoplasmic Reticulum Stress Response in Cell Death and Cell Survival
- •1. INTRODUCTION
- •2. THE ESR IN YEAST
- •3. THE ESR IN MAMMALS
- •4. THE ESR AND CELL DEATH
- •5. THE ESR IN DEVELOPMENT AND TISSUE HOMEOSTASIS
- •6. THE ESR IN HUMAN DISEASE
- •7. CONCLUSION
- •7 Autophagy – The Liaison between the Lysosomal System and Cell Death
- •1. INTRODUCTION
- •2. AUTOPHAGY
- •2.2. Physiologic functions of autophagy
- •2.3. Autophagy and human pathology
- •3. AUTOPHAGY AND CELL DEATH
- •3.1. Autophagy as anti–cell death mechanism
- •3.2. Autophagy as a cell death mechanism
- •3.3. Molecular players of the autophagy–cell death cross-talk
- •4. AUTOPHAGY, CELLULAR DEATH, AND CANCER
- •5. CONCLUDING REMARKS AND PENDING QUESTIONS
- •SUGGESTED READINGS
- •8 Cell Death in Response to Genotoxic Stress and DNA Damage
- •1. TYPES OF DNA DAMAGE AND REPAIR SYSTEMS
- •2. DNA DAMAGE RESPONSE
- •2.2. Transducers
- •2.3. Effectors
- •4. CHROMATIN MODIFICATIONS
- •5. CELL CYCLE CHECKPOINT REGULATION
- •6. WHEN REPAIR FAILS: SENESCENCE VERSUS APOPTOSIS
- •6.1. DNA damage response and the induction of apoptosis
- •6.2. p53-independent mechanisms of apoptosis
- •6.3. DNA damage response and senescence induction
- •7. DNA DAMAGE FROM OXIDATIVE STRESS
- •SUGGESTED READINGS
- •9 Ceramide and Lipid Mediators in Apoptosis
- •1. INTRODUCTION
- •3.1. Basic cell signaling often involves small molecules
- •3.2. Sphingolipids are cell-signaling molecules
- •3.2.1. Ceramide induces apoptosis
- •3.2.2. Ceramide accumulates during programmed cell death
- •3.2.3. Inhibition of ceramide production alters cell death signaling
- •4.1. Ceramide is generated through SM hydrolysis
- •4.3. aSMase can be activated independently of extracellular receptors to regulate apoptosis
- •4.4. Controversial aspects of the role of aSMase in apoptosis
- •4.5. De novo ceramide synthesis regulates programmed cell death
- •4.6. p53 and Bcl-2–like proteins are connected to de novo ceramide synthesis
- •4.7. The role and regulation of de novo synthesis in ceramide-mediated cell death is poorly understood
- •5. CONCLUDING REMARKS AND FUTURE DIRECTIONS
- •5.1. Who? (Which enzyme?)
- •5.2. What? (Which ceramide?)
- •5.3. Where? (Which compartment?)
- •5.4. When? (At what steps?)
- •5.5. How? (Through what mechanisms?)
- •5.6. What purpose?
- •6. SUMMARY
- •SUGGESTED READINGS
- •1. General Introduction
- •1.1. Cytotoxic lymphocytes and apoptosis
- •2. CYTOTOXIC GRANULES AND GRANULE EXOCYTOSIS
- •2.1. Synthesis and loading of the cytotoxic granule proteins into the secretory granules
- •2.2. The immunological synapse
- •2.3. Secretion of granule proteins
- •2.4. Uptake of proapoptotic proteins into the target cell
- •2.5. Activation of death pathways by granzymes
- •3. GRANULE-BOUND CYTOTOXIC PROTEINS
- •3.1. Perforin
- •3.2. Granulysin
- •3.3. Granzymes
- •3.3.1. GrB-mediated apoptosis
- •3.3.2. GrA-mediated cell death
- •3.3.3. Orphan granzyme-mediated cell death
- •5. CONCLUSIONS
- •REFERENCES
- •Part II Cell Death in Tissues and Organs
- •1.1. Death by trophic factor deprivation
- •1.2. Key molecules regulating neuronal apoptosis during development
- •1.2.1. Roles of caspases and Apaf-1 in neuronal cell death
- •1.2.2. Role of Bcl-2 family members in neuronal cell death
- •1.3. Signal transduction from neurotrophins and neurotrophin receptors
- •1.3.1. Signals for survival
- •1.3.2. Signals for death
- •2.1. Apoptosis in neurodegenerative diseases
- •2.1.4. Amyotrophic lateral sclerosis
- •2.2. Necrotic cell death in neurodegenerative diseases
- •2.2.1. Calpains
- •2.2.2. Cathepsins
- •3. CONCLUSIONS
- •ACKNOWLEDGMENT
- •SUGGESTED READINGS
- •ACKNOWLEDGMENT
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •5. S-NITROSYLATION OF PARKIN
- •7. POTENTIAL TREATMENT OF EXCESSIVE NMDA-INDUCED Ca2+ INFLUX AND FREE RADICAL GENERATION
- •8. FUTURE THERAPEUTICS: NITROMEMANTINES
- •9. CONCLUSIONS
- •Acknowledgments
- •SUGGESTED READINGS
- •3. MITOCHONDRIAL PERMEABILITY TRANSITION ACTIVATED BY Ca2+ AND OXIDATIVE STRESS
- •4.1. Mitochondrial apoptotic pathways
- •4.2. Bcl-2 family proteins
- •4.3. Caspase-dependent apoptosis
- •4.4. Caspase-independent apoptosis
- •4.5. Calpains in ischemic neural cell death
- •5. SUMMARY
- •ACKNOWLEDGMENTS
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •2. HISTORICAL ANTECEDENTS
- •7.1. Activation of p21 waf1/cip1: Targeting extrinsic and intrinsic pathways to death
- •8. CONCLUSION
- •ACKNOWLEDGMENTS
- •REFERENCES
- •16 Apoptosis and Homeostasis in the Eye
- •1.1. Lens
- •1.2. Retina
- •2. ROLE OF APOPTOSIS IN DISEASES OF THE EYE
- •2.1. Glaucoma
- •2.2. Age-related macular degeneration
- •4. APOPTOSIS AND OCULAR IMMUNE PRIVILEGE
- •5. CONCLUSIONS
- •SUGGESTED READINGS
- •17 Cell Death in the Inner Ear
- •3. THE COCHLEA IS THE HEARING ORGAN
- •3.1. Ototoxic hair cell death
- •3.2. Aminoglycoside-induced hair cell death
- •3.3. Cisplatin-induced hair cell death
- •3.4. Therapeutic strategies to prevent hair cell death
- •3.5. Challenges to studies of hair cell death
- •4. SPIRAL GANGLION NEURON DEATH
- •4.1. Neurotrophic support from sensory hair cells and supporting cells
- •4.2. Afferent activity from hair cells
- •4.3. Molecular manifestations of spiral ganglion neuron death
- •4.4. Therapeutic interventions to prevent SGN death
- •ACKNOWLEDGMENTS
- •SUGGESTED READINGS
- •18 Cell Death in the Olfactory System
- •1. Introduction
- •2. Anatomical Aspects
- •3. Life and Death in the Olfactory System
- •3.1. Olfactory epithelium
- •3.2. Olfactory bulb
- •REFERENCES
- •1. Introduction
- •3.1. Beta cell death in the development of T1D
- •3.2. Mechanisms of beta cell death in type 1 diabetes
- •3.2.1. Apoptosis signaling pathways downstream of death receptors and inflammatory cytokines
- •3.2.2. Oxidative stress
- •3.3. Mechanisms of beta cell death in type 2 diabetes
- •3.3.1. Glucolipitoxicity
- •3.3.2. Endoplasmic reticulum stress
- •5. SUMMARY
- •Acknowledgments
- •REFERENCES
- •20 Apoptosis in the Physiology and Diseases of the Respiratory Tract
- •1. APOPTOSIS IN LUNG DEVELOPMENT
- •2. APOPTOSIS IN LUNG PATHOPHYSIOLOGY
- •2.1. Apoptosis in pulmonary inflammation
- •2.2. Apoptosis in acute lung injury
- •2.3. Apoptosis in chronic obstructive pulmonary disease
- •2.4. Apoptosis in interstitial lung diseases
- •2.5. Apoptosis in pulmonary arterial hypertension
- •2.6. Apoptosis in lung cancer
- •SUGGESTED READINGS
- •21 Regulation of Cell Death in the Gastrointestinal Tract
- •1. INTRODUCTION
- •2. ESOPHAGUS
- •3. STOMACH
- •4. SMALL AND LARGE INTESTINE
- •5. LIVER
- •6. PANCREAS
- •7. SUMMARY AND CONCLUDING REMARKS
- •SUGGESTED READINGS
- •22 Apoptosis in the Kidney
- •1. NORMAL KIDNEY STRUCTURE AND FUNCTION
- •3. APOPTOSIS IN ADULT KIDNEY DISEASE
- •4. REGULATION OF APOPTOSIS IN KIDNEY CELLS
- •4.1. Survival factors
- •4.2. Lethal factors
- •4.2.1. TNF superfamily cytokines
- •4.2.2. Other cytokines
- •4.2.3. Glucose
- •4.2.4. Drugs and xenobiotics
- •4.2.5. Ischemia-reperfusion and sepsis
- •5. THERAPEUTIC APPROACHES
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •2. APOPTOSIS IN THE NORMAL BREAST
- •2.1. Occurrence and role of apoptosis in the developing breast
- •2.2.2. Death ligands and death receptor pathway
- •2.2.4. LIF-STAT3 proapoptotic signaling
- •2.2.5. IGF survival signaling
- •2.2.6. Regulation by adhesion
- •2.2.7. PI3K/AKT pathway: molecular hub for survival signals
- •2.2.8. Downstream regulators of apoptosis: the BCL-2 family members
- •3. APOPTOSIS IN BREAST CANCER
- •3.1. Apoptosis in breast tumorigenesis and cancer progression
- •3.2. Molecular dysregulation of apoptosis in breast cancer
- •3.2.1. Altered expression of death ligands and their receptors in breast cancer
- •3.2.2. Deregulation of prosurvival growth factors and their receptors
- •3.2.3. Alterations in cell adhesion and resistance to anoikis
- •3.2.4. Enhanced activation of the PI3K/AKT pathway in breast cancer
- •3.2.5. p53 inactivation in breast cancer
- •3.2.6. Altered expression of BCL-2 family of proteins in breast cancer
- •5. CONCLUSION
- •SUGGESTED READINGS
- •1. INTRODUCTION
- •2. DETECTING CELL DEATH IN THE FEMALE GONADS
- •4. APOPTOSIS AND FEMALE REPRODUCTIVE AGING
- •6. CONCLUDING REMARKS
- •REFERENCES
- •25 Apoptotic Signaling in Male Germ Cells
- •1. INTRODUCTION
- •3.1. Murine models
- •3.2. Primate models
- •3.3. Pathways of caspase activation and apoptosis
- •3.4. Apoptotic signaling in male germ cells
- •5. P38 MITOGEN-ACTIVATED PROTEIN KINASE (MAPK) AND NITRIC OXIDE (NO)–MEDIATED INTRINSIC PATHWAY SIGNALING CONSTITUTES A CRITICAL COMPONENT OF APOPTOTIC SIGNALING IN MALE GERM CELLS AFTER HORMONE DEPRIVATION
- •11. CONCLUSIONS AND PERSPECTIVES
- •REFERENCES
- •26 Cell Death in the Cardiovascular System
- •1. INTRODUCTION
- •2. CELL DEATH IN THE VASCULATURE
- •2.1. Apoptosis in the developing blood vessels
- •2.2. Apoptosis in atherosclerosis
- •2.2.1. Vascular smooth muscle cells
- •2.2.2. Macrophages
- •2.2.3. Regulation of apoptosis in atherosclerosis
- •2.2.4. Necrosis and autophagy in atherosclerosis
- •3. CELL DEATH IN THE MYOCARDIUM
- •3.1. Cell death in myocardial infarction
- •3.1.1. Apoptosis in myocardial infarction
- •3.1.2. Necrosis in myocardial infarction
- •3.1.3. Autophagy in myocardial infarction
- •3.2. Cell death in heart failure
- •3.2.1. Apoptosis in heart failure
- •3.2.2. Necrosis in heart failure
- •3.2.3. Autophagy in heart failure
- •4. CONCLUDING REMARKS
- •ACKNOWLEDGMENTS
- •REFERENCES
- •27 Cell Death Regulation in Muscle
- •1. INTRODUCTION TO MUSCLE
- •1.1. Skeletal muscle adaptation to endurance training
- •1.2. Myonuclear domains
- •2. MITOCHONDRIALLY MEDIATED APOPTOSIS IN MUSCLE
- •2.1. Skeletal muscle apoptotic susceptibility
- •4. APOPTOSIS IN MUSCLE DURING AGING AND DISEASE
- •4.1. Aging
- •4.2. Type 2 diabetes mellitus
- •4.3. Cancer cachexia
- •4.4. Chronic heart failure
- •6. CONCLUSION
- •SUGGESTED READINGS
- •28 Cell Death in the Skin
- •1. INTRODUCTION
- •2. CELL DEATH IN SKIN HOMEOSTASIS
- •2.1. Cornification and apoptosis
- •2.2. Death receptors in the skin
- •3. CELL DEATH IN SKIN PATHOLOGY
- •3.1. Sunburn
- •3.2. Skin cancer
- •3.3. Necrolysis
- •3.4. Pemphigus
- •3.5. Eczema
- •3.6. Graft-versus-host disease
- •4. CONCLUDING REMARKS AND PERSPECTIVES
- •ACKNOWLEDGMENTS
- •SUGGESTED READINGS
- •29 Apoptosis and Cell Survival in the Immune System
- •2.1. Survival of early hematopoietic progenitors
- •2.2. Sizing of the T-cell population
- •2.2.1. Establishing central tolerance
- •2.2.2. Peripheral tolerance
- •2.2.3. Memory T cells
- •2.3. Control of apoptosis in B-cell development
- •2.3.1. Early B-cell development
- •2.3.2. Deletion of autoreactive B cells
- •2.3.3. Survival and death of activated B cells
- •3. IMPAIRED APOPTOSIS AND LEUKEMOGENESIS
- •4. CONCLUSIONS
- •ACKNOWLEDGMENTS
- •REFERENCES
- •30 Cell Death Regulation in the Hematopoietic System
- •1. INTRODUCTION
- •2. HEMATOPOIETIC STEM CELLS
- •4. ERYTHROPOIESIS
- •5. MEGAKARYOPOIESIS
- •6. GRANULOPOIESIS
- •7. MONOPOIESIS
- •8. CONCLUSION
- •ACKNOWLEDGMENTS
- •REFERENCES
- •31 Apoptotic Cell Death in Sepsis
- •1. INTRODUCTION
- •2. HOST INFLAMMATORY RESPONSE TO SEPSIS
- •3. CLINICAL OBSERVATIONS OF CELL DEATH IN SEPSIS
- •3.1. Sepsis-induced apoptosis
- •3.2. Necrotic cell death in sepsis
- •4.1. Central role of apoptosis in sepsis mortality: immune effector cells and gut epithelium
- •4.2. Apoptotic pathways in sepsis-induced immune cell death
- •4.3. Investigations implicating the extrinsic apoptotic pathway in sepsis
- •4.4. Investigations implicating the intrinsic apoptotic pathway in sepsis
- •5. THE EFFECT OF APOPTOSIS ON THE IMMUNE SYSTEM
- •5.1. Cellular effects of an increased apoptotic burdens
- •5.2. Network effects of selective loss of immune cell types
- •5.3. Studies of immunomodulation by apoptotic cells in other fields
- •7. CONCLUSION
- •REFERENCES
- •32 Host–Pathogen Interactions
- •1. INTRODUCTION
- •2. FROM THE PATHOGEN PERSPECTIVE
- •2.1. Commensals versus pathogens
- •2.2. Pathogen strategies to infect the host
- •3. HOST DEFENSE
- •3.1. Antimicrobial peptides
- •3.2. PRRs and inflammation
- •3.2.1. TLRs
- •3.2.2. NLRs
- •3.2.3. The Nod signalosome
- •3.2.4. The inflammasome
- •3.3. Cell death
- •3.3.1. Apoptosis and pathogen clearance
- •3.3.2. Pyroptosis
- •3.2.3. Caspase-independent cell death
- •3.2.4. Autophagy and autophagic cell death
- •4. CONCLUSIONS
- •REFERENCES
- •Part III Cell Death in Nonmammalian Organisms
- •1. PHENOTYPE AND ASSAYS OF YEAST APOPTOSIS
- •2.1. Pheromone-induced cell death
- •2.1.1. Colony growth
- •2.1.2. Killer-induced cell death
- •3. EXTERNAL STIMULI THAT INDUCE APOPTOSIS IN YEAST
- •4. THE GENETICS OF YEAST APOPTOSIS
- •5. PROGRAMMED AND ALTRUISTIC AGING
- •SUGGESTED READINGS
- •34 Caenorhabditis elegans and Apoptosis
- •1. Overview
- •2. KILLING
- •3. SPECIFICATION
- •4. EXECUTION
- •4.1. DNA degradation
- •4.2. Mitochondrial elimination
- •4.3. Engulfment
- •5. SUMMARY
- •SUGGESTED READINGS
- •35 Apoptotic Cell Death in Drosophila
- •2. DROSOPHILA CASPASES AND PROXIMAL REGULATORS
- •6. CLOSING COMMENTS
- •SUGGESTED READINGS
- •36 Analysis of Cell Death in Zebrafish
- •1. INTRODUCTION
- •2. WHY USE ZEBRAFISH TO STUDY CELL DEATH?
- •2.2. Molecular techniques to rapidly assess gene function in embryos
- •2.2.1. Studies of gene function using microinjections into early embryos
- •2.2.2. In situ hybridization and immunohistochemistry
- •2.3. Forward genetic screening
- •2.4. Drug and small-molecule screening
- •2.5. Transgenesis
- •2.6. Targeted knockouts
- •3.1. Intrinsic apoptosis
- •3.2. Extrinsic apoptosis
- •3.3. Chk-1 suppressed apoptosis
- •3.4. Anoikis
- •3.5. Autophagy
- •3.6. Necrosis
- •4. DEVELOPMENTAL CELL DEATH IN ZEBRAFISH EMBRYOS
- •5. THE P53 PATHWAY
- •6. PERSPECTIVES AND FUTURE DIRECTIONS
- •SUGGESTED READING
34 |
HENNING WALCZAK AND CHAHRAZADE KANTARI |
confers resistance to lung inflammation in mice (Meylan et al., 2008). Meylan et al. (2008) proposed that the interaction of TL1A with DR3 provides an early signal for Th2 cytokine production in lung inflammation and that DR3 could be a valuable target in the treatment of asthma.
4. THE DR6 SYSTEM
Although death receptor 6 (DR6) was identified already in 1998 on the basis of its similarity to TNF-R2, it is the by far least studied DD-containing receptor to date. This is most likely due to the fact that until very recently, a cellular ligand for DR6 has been elusive. In addition, unlike all other members of the DD-containing subfamily of receptors in which the DD is found at or close to the carboxy-terminus of the protein, the DD of DR6 almost immediately follows the transmembrane domain, and then there is an additional domain of approximately 150 amino acids and unknown function at the carboxyterminus of the protein. Thus the sequence of the two intracellular portions is inversed in DR6 as compared with the other five DD-containing receptors. This difference with respect to intramolecular positioning of the DD may be the reason why DR6 seems to recruit adaptor proteins in a manner different from that of the other DD-containing receptors. DR6 has been shown to be capable of engaging a signal transduction pathway that leads to the activation of NF-κB and JNK. However, overexpression of DR6 has been shown to induce apoptosis in a manner dependent on its DD. There are indications that this effect may be mediated via recruitment of TRADD and not FADD. However, the interaction with TRADD is a low-affinity interaction, and possibly DR6 needs a TRADD-related molecule or an additional adaptor protein to engage the cell death machinery. Taken together, it seems that the molecular interactions at the onset of DR6-induced signal transduction have largely remained in the dark, at least thus far.
Despite considerable efforts, to date no TNFSF member that binds to DR6 has been identified. However, in a recent study (Nikolaev et al., 2009), a non-TNFSF protein with an interesting etiology was described as a ligand of DR6. This protein is a specific proteolytically processed form of APP. APP is a transmembrane glycoprotein that undergoes shedding. APP is thought to be causally implicated in Alzheimer’s disease (AD). Trophic factor deprivation in neurons leads to cleavage of APP by β-secretase, followed by further cleavage of the released fragment by an unknown protease, thereby generating the N-terminal 35-kDa fragment of APP (N-APP), which is capable of binding to DR6. The capacity of N-APP to bind to DR6 was identified in COS cells and by an enzyme-linked immunosorbent assay–
like binding assay. Specificity of the interaction between N-APP and DR6 has been tested in pull-down assays showing that N-APP does not interact with any of the other DD-containing receptors. Binding of N-APP to DR6 triggers a caspase-dependent limited cellular destruction process. It has been shown that after trophic factor deprivation, N-APP release triggers DR6-mediated death of the neuronal cell body, which involves activation of caspase-3, whereas, interestingly, axon degeneration is mediated by caspase-6 in a Bax-dependent manner. The mechanism of this differential control of caspase activation between cell body and axons is at present completely unclear. It will be particularly interesting to understand how caspase-6 can be activated without involvement of caspase-3 and also in the absence of any apparent activation of caspases-8 and -10. Because DR6 is widely expressed in neurons as they differentiate and enter a proapoptotic state and APP is highly expressed on axons, and because AD is marked by neuronal and axonal degeneration, the study proposed an involvement of DR6 in loss of neuronal cell mass in AD.
In summary, although this study (Nikolaev et al., 2009) partially illuminates our understanding of DR6mediated processes, it also poses many basic questions regarding the mechanism of DR-mediated signaling behind. Thereby it exemplifies how little we still know about this thus far most elusive death receptor-ligand system, the biochemistry of its signaling pathways, and the physiologic role it may play. It will be exciting to follow the developments of this field as it may hold the key to the treatment of one of the worst neurodegenerative diseases we are faced with today. And who knows, maybe the TNF history will be repeated, and DR6 may even play a role in other neurodegenerative diseases.
5. FUNCTIONAL SPECIALIZATION BY SEQUENTIAL
SIGNALING COMPLEX FORMATION IN DEATH RECEPTOR
SIGNAL TRANSDUCTION
The receptor-associated signaling complexes described in the earlier sections of this chapter form at the plasma membrane. However, they are not the only signaling complexes that form in the cell when TNFSF ligands activate DD-containing TNFRSF receptors. After formation of the receptor-associated protein complex, referred to as complex I, biochemical changes within the complex that are not yet understood induce loss of affinity of the adaptor proteins FADD and TRADD for their respective receptors. Together with at least some of the factors they recruited to the respective receptors, they then form a secondary, cytoplasmic signaling complex, complex II, which can recruit further proteins to the liberated DDs of FADD or TRADD, respectively. Intriguingly, in both cases
DEATH DOMAIN–CONTAINING RECEPTORS – DECISIONS BETWEEN SUICIDE AND FIRE |
35 |
complex II is capable of inducing the very signal that was not induced by the respective complex I; that is, complex II, derived from TRADD-binding receptors, induces signals that can lead to apoptosis, and complex II of FADDbinding receptors induces gene activation, resulting in proinflammatory signaling. However, when the primary signals from the respective complex I prevails, the outcome of secondary signaling from complex II is often neutralized by the very effects triggered by the primary complex (Figure 3-4).
This new concept was first introduced for TNF-R1 in a landmark study by Micheau and Tschopp (2003). They found that signaling by this receptor involves the formation of two sequential signaling complexes, leading to activation of transcriptional programs and induction of apoptosis, respectively. The first complex that forms at the plasma membrane when TNF cross-links TNFR1 induces biochemical reactions that ultimately result in the activation of transcriptional events, whereas the cytoplasmic complex II – although derived from complex I – is capable of inducing apoptosis, at least when signaling events induced by complex I do not impede this (Figure 3-4).
More specifically, release of TRADD from the receptor, together with the majority of the signaling proteins that it either directly or indirectly recruited to this complex, leads to the formation of complex II. Complex II then recruits FADD, presumably to the DD of TRADD, which is freed because it left the DD of the receptor behind. Then the initiator caspase-8 and -10 are recruited to FADD, and, initiated by this intracellular secondary DISC, the cell can now undergo apoptosis. However, the signaling outcome of complex II depends on the result of complex I signaling; the gene-inducing events triggered by complex I of the TRADD-binding receptors in most cases lead to an increase in the expression of cFLIP. This then interferes with activation of caspase-8 and-10 at complex II, the cytoplasmic DISC (Figure 3-4), with the result that the cell does not die. It is very likely that the same events are true for DR3 signaling; however, this has not yet been studied.
For the FADD-recruiting receptors, it has in turn been shown that on release of FADD from the TRAIL DISC (i.e., the complex I in this system), complex II recruits TRAF2, cIAP1/2, RIP, NEMO, and possibly a number of other proteins – including TRADD – required to induce the activation of NF-κB, as well as the JNK and p38 MAP kinase pathways (Varfolomeev et al., 2005). Obviously, this pathway would only be induced in a productive manner in cells in which proper execution of the apoptotic cell death program, which is usually quite rapid, would be blocked. Thus this pathway is not the primary reaction of the cell to the stimulus provided by CD95L or
TRAIL but must be regarded as the secondary, alternative outcome of activation of the direct apoptosis inducers.
The spatial and temporal separation of different biochemical tasks into discrete signaling complexes that act in different cellular compartments (i.e., at the plasma membrane versus in the cytoplasm) and are activated sequentially in a hierarchical manner is striking and makes biological sense. In case the first signal prevails, you do not need the second one, and in fact it should probably be minimized. However, if the primary signal is not achieved, then the second, deferred signal kicks in and opens new avenues to achieve a very different, seemingly opposing outcome.
One may ask why the system does not try to achieve the same outcome in its second attempts. Perhaps it does, but in an unexpected manner. When a certain outcome of signaling is not achieved, then this means there is a problem in its execution. In such situations, biology often follows a new path to achieve the same physiologic end point. If a cell that should die does not do so, this means trouble. Therefore, the activation of proinflammatory signaling to attract other cells of the innate immune system (and, possibly later, also adaptive immune cells, which may be able to handle the situation around the cell that did not die) seems like a very sensible thing to do. With respect to the TRADD binders, if proper immunostimulatory signaling, as supervised by induction of cFLIP, cannot be achieved, then the induction of the cell death program kicks in. This cell death is apoptotic. Apoptotic cell death can either be immunogenic or nonimmunogenic. It is not clear which type of cell death is induced by TNF when the geneinductive path does not prevail. However, our prediction would be that it is the immunogenic one and that thereby the same biological outcome (i.e., the creation of an immunostimulatory, pro-inflammatory environment) could be achieved, yet via a path very different from the originally intended apoptosis. Thus in the end it appears that cellular suicide and inflammation may be linked closer to each other than it first seemed.
6. CONCLUDING REMARKS AND OUTLOOK
Since the discovery of TNF, many truly exciting developments have characterized the research into the function of TNFR-like receptors that are capable of inducing cell death. The level to which the study of the different receptor-ligand systems has pushed our understanding of the biochemical processes that are at the heart of the induction of the specific cellular responses associated with both their physiologic and pathological consequences is astonishing. However, these studies have also made it very clear that we will
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have to understand them in even more detail. This means that we have to be able to study them in a timeresolved manner, and we have to get close-up pictures of parts of the system to unravel the molecular simplicity behind the processes that today still seem so incredibly complex. By determining the biochemical interactions at the molecular, in some cases submolecular, atomic level, we will ultimately be able to unravel their mysteries and interpret them correctly.
Set apart from the beauty of solving the mysteries of molecular interactions and their connection to biology, the most important achievement of the research into the function of the receptors and ligands discussed in this chapter is the translation of knowledge on the basic biochemical mechanisms into clinical practice. Astonishing achievements in the TNF field have been made to date. However, a number of additional new avenues into clinical application are currently being followed within the TNF and TNFR superfamilies, and some of them have been touched on in this chapter. It seems we are far from having appreciated the full potential of the death receptor-ligand systems as targets for the treatment of diseases. So this fascinating and hopefully rewarding journey continues.
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