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Molecular Fluorescence

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Fig. 6.13. Data obtained by the phasemodulation technique with a Fluorolog tau-3 instrument (Jobin Yvon-Spex) operating with a xenon lamp and a Pockel’s cell. Note that because the fluorescence decay is a single exponential, a single appropriate modulation frequency su ces for the lifetime determination. The broad set of frequencies permits control of the proper tuning of the

6.2 Time-resolved fluorometry 185

instrument. Sample: solution of POPOP in cyclohexane (undegassed). Excitation wavelength: 340 nm; observation through a cut-o filter at 390 nm (no emission monochromator). Reference: scattering solution (Ludox). Number of frequencies: 13 frequencies from 50 to 280 MHz. Result:

t ¼ 1:06 G0:01 ns; wr2 ¼ 0:924.

proton transfer, etc.), we can fit all the curves recorded at di erent wavelengths by constraining the decay times to be the same for all sets, but allowing di erent values of the pre-exponential factors.

6.2.5.5 Complex fluorescence decays. Lifetime distributions

When the fit with a single exponential is unsatisfactory, a second exponential is often added. If the quality of the fit is still unsatisfactory, a third exponential term is added. In most cases, a fourth component does not improve the quality of the fit. A satisfactory fit with a sum of two (or three, or four) exponential terms with more or

186 6 Principles of steady-state and time-resolved fluorometric techniques

less closely spaced time constants means that the number of fitting parameters is large enough – considering the limited accuracy of the experimental data – but it does not prove that the number of components is two (or three, or four), unless it is already known that the system can be described by a physical model involving distinct exponentials.

In some circumstances, it can be anticipated that continuous lifetime distributions would best account for the observed phenomena. Examples can be found in biological systems such as proteins, micellar systems and vesicles or membranes. If an a priori choice of the shape of the distribution (i.e. Gaussian, sum of two Gaussians, Lorentzian, sum of two Lorentzians, etc.) is made, a satisfactory fit of the experimental data will only indicate that the assumed distribution is compatible with the experimental data, but it will not demonstrate that this distribution is the only possible one, and that a sum of a few distinct exponentials should be rejected.

To answer the question as to whether the fluorescence decay consists of a few distinct exponentials or should be interpreted in terms of a continuous distribution, it is advantageous to use an approach without a priori assumption of the shape of the distribution. In particular, the maximum entropy method (MEM) is capable of handling both continuous and discrete lifetime distributions in a single analysis of data obtained from pulse fluorometry or phase-modulation fluorometry (Brochon, 1994) (see Box 6.1).

6.2.6

Lifetime standards

The excited-state lifetimes of some compounds that can be used as standards are given in Table 6.2. These values are the averages of data obtained from eight laboratories. There is some deviation from one laboratory to another. For instance, the values reported for POPOP in deoxygenated cyclohexane range from 1.07 to 1.18 ns. The unavoidable small artefacts of any instrument, the di erent origins of the samples and solvents, the di culty of preparing identical solutions without any trace of impurity, quencher, etc., can explain the small deviations observed from laboratory to laboratory. However, more important than the lifetime value itself, is the control that the instrument is properly tuned. After selecting one of the standards in Table 6.1 whose characteristics (lifetime, excitation and observation wavelengths) are preferentially not very di erent from those of the sample to be studied, it is advisable to check that this selected standard indeed exhibits a single exponential decay with a value consistent with that reported in Table 6.2. In the case of short lifetime measurements requiring deconvolution, it should be checked that the reconvoluted curve satisfactorily superimposes the experimental curve, especially in the rise part of the curve.

When normal photomultipliers that exhibit a ‘color e ect’ (see above) are used, the compounds of Table 6.2 that have a short lifetime (e.g. POPOP, PPO) can be used in place of a scattering solution in order to remove this e ect (this method is valid for both pulse and phase fluorometries). Such a reference fluorophore must

6.2 Time-resolved fluorometry 187

Box 6.1 The maximum entropy method (MEM)

The maximum entropy method has been successfully applied to pulse fluorometry and phase-modulation fluorometrya–e). Let us first consider pulse fluorometry. For a multi-exponential decay with n components whose fractional amplitudes are ai, the d-pulse response is

Xn

IðtÞ ¼ ai expð t=tiÞ

i¼1

or, for a distribution of decay times,

ð

IðtÞ ¼ aðtÞ expð t=tÞ dt

The problem is to determine the spectrum of decay times aðtÞ from timeresolved fluorescence data. aðtÞ appears as the inverse Laplace transform of the fluorescence decay deconvolved by the light pulse. However, inverting the Laplace transform is very ill-conditioned. Consequently, the unavoidable small errors in the measurement of the fluorescence decay or light pulse profile can lead to very large changes in the reconstruction of aðtÞ, i.e. a large multiplicity of allowable solutions. Among these solutions that fit equally well the experimental decay on the basis of statistical tests (mainly chi-squared values, weighted residuals and autocorrelation functions), some of them can be rejected when they contain unphysical features. The remaining set of solutions is called the feasible set (Figure B6.1.1) from which we must choose one member.

The choice of the preferred solution within the feasible set can be achieved by maximizing some function F½aðtÞ& of the spectrum that introduces the fewest artefacts into the distribution. It has been proved that only the Shannon–Jaynes entropy S will give the least correlated solutionf ). All other maximization (or regularization) functions introduce correlations into the solution not demanded by the data. The function S is defined as

S ¼

y

aðtÞ mðtÞ aðtÞ log mððtÞÞ dt

ð0

 

 

 

a t

where m is the model that encodes our prior knowledge about the system. It has been shown that if we have no knowledge of which values of the fractional amplitudes a are expected, they all have equal prior probability, and m is a flat distribution (mi ¼ constant).

In phase-modulation fluorometry, it is convenient to use the fractional contributions fi instead of the fractional amplitudes, as shown in Eqs (6.30) and (6.31). The above equation is thus rewritten as

188 6 Principles of steady-state and time-resolved fluorometric techniques

Fig. B6.1.1. The feasible set (hatched) in which MEM will

choose a ‘preferred’ solution (redrawn from Livesey and Brochona)).

Fig. B6.1.2. Recovered distributions from phase-modulation data for ANS in an aqueous solution containing micelles of sodium dodecylsulfate at 25 and 60 C. The number of modulation frequencies is 24. Analysis by MEM with 100 image points (log scale from

0.6 to 25 ns) was performed with an additional exponential component (presence of free ANS). Best fits of the recovered distributions by a Gaussian (v, 9) (reprinted with permission from Brochon et al.g)).

6.2 Time-resolved fluorometry 189

 

 

y

 

 

 

 

 

 

f ðtÞ

 

 

S

 

 

 

f t

m t

 

f t

log

 

dt

¼

ð0

 

Þ

tÞ

 

ð Þ

ð

ð Þ

 

 

Ð

(with mðtÞ dt ¼ 1 if no prior knowledge of the distribution).

The commercially available software (Maximum Entropy Data Consultant Ltd, Cambridge, UK) allows reconstruction of the distribution aðtÞ (or f ðtÞ) which has the maximal entropy S subject to the constraint of the chi-squared value. The quantified version of this software has a full Bayesian approach and includes a precise statement of the accuracy of quantities of interest, i.e. position, surface and broadness of peaks in the distribution. The distributions are recovered by using an automatic stopping criterion for successive iterates, which is based on a Gaussian approximation of the likelihood.

An example of recovered distribution is shown in Figure B6.1.2. It concerns the distribution of lifetimes of 2,6-ANS solubilized in the outer core region of sodium dodecylsulfate micellesg). In fact, the microheterogeneity of solubilized sites results in a distribution of lifetimes.

a) Livesey A. K. and Brochon J.-C. (1987)

e) Shaver J. M. and McGown L. B. (1996)

Biophys. J. 52, 517.

Anal. Chem. 68, 9; 611.

b) Brochon J.-C., Livesey A. K., Pouget J. and

f ) Livesey A. K. and Skilling J. (1985) Acta

Valeur B. (1990) Chem. Phys. Lett. 174, 517.

Crystallogr. Sect. B. Struct. Crystallogr.

c) Siemarczuk A., Wagner B. D. and Ware W.

Crystallogr. Chem. A41, 113.

R. (1990) J. Phys. Chem. 94, 1661.

g) Brochon J.-C., Pouget J. and Valeur B.

d) Brochon J.-C. (1994) Methods in Enzymology,

(1995) J. Fluorescence 5, 193.

240, 262.

 

be excitable and observable under the same conditions as those of the sample. However, it should be emphasized that the lifetime value of the reference fluorophore must not be taken from Table 6.2 (because the value may slightly di er from one instrument to another), but be measured on the same instrument and under the same conditions as those of the investigations on new samples to be done using this reference fluorophore.

It is interesting to note that when using two fluorophores (whose fluorescence decays are known to be single exponentials), one as a sample and the other as a reference, it is possible to determine the lifetimes of both the fluorophores without external reference: this can be achieved in data analysis by varying the reference lifetime until a minimum value of wr2 is reached.

6.2.7

Time-dependent anisotropy measurements

6.2.7.1 Pulse fluorometry

The time dependence of emission anisotropy is defined as (see Chapter 5):

rðtÞ ¼

IkðtÞ I?ðtÞ

¼

IkðtÞ I?ðtÞ

ð6:43Þ

IkðtÞ þ 2I?ðtÞ

IðtÞ

 

1906 Principles of steady-state and time-resolved fluorometric techniques

Tab. 6.2. Lifetime of various compounds in deoxygenated fluid solutions at 20 C. Averages of

the values measured by eight laboratories by either pulse fluorometry (four laboratories) or phase fluorometry (four laboratories)a)

Compoundb)

Solvent

Lifetime t

100

lex

lem

d

e

 

 

(ns)c)

s/t

(nm)

(nm)

 

 

 

 

 

 

 

 

 

 

NATA

Water

3:04 G0:04

1.2

295–325

325–415

5

4

Anthracene

Methanol

5:1 G0:3

6.4

300–330

380–442

6

6

 

Cyclohexane

5:3 G0:2

3.0

295–325

345–442

5

5

9-Cyanoanthracene

Methanol

16:5 G0:5

6.0

295–325

370–442

6

5

 

Cyclohexane

12:4 G0:5

4.1

295–325

345–380

4

3

Erythrosin B

Water

0:089 G0:002

2.5

488, 514, 568

515–575

5

4

 

Methanol

0:48 G0:02

5.0

488, 514

515–560

5

5

9-Methylcarbazole

Cyclohexane

14:4 G0:4

2.5

295–325

360–400

5

4

DPA

Methanol

8:7 G0:5

5.9

295–344

370–475

7

7

 

Cyclohexane

7:3 G0:5

6.2

295–344

345–480

7

6

PPO

Methanol

1:64 G0:04

2.4

295–330

345–425

7

7

 

Cyclohexane

1:35 G0:03

2.5

295–325

345–425

6

6

POPOP

Cyclohexane

1:13 G0:05

4.3

295–325

380–450

4

4

Rhodamine B

Water

1:71 G0:07

4.1

488–514

515–630

5

4

 

Methanol

2:53 G0:08

3.1

295, 488, 514

515–630

6

5

Rubrene

Methanol

9:8 G0:3

2.6

300, 330,

530–590

5

5

 

 

 

 

488, 514

 

 

 

SPA

Water

31:2 G0:4

1.4

300–330

370–510

5

5

p-Terphenyl

Methanol

1:16 G0:08

7.0

284–315

330–380

6

6

 

Cyclohexane

0:99 G0:03

2.9

295–315

330–390

4

4

 

 

 

 

 

 

 

 

a)Data collected by N. Boens and M. Ameloot.

b)Abbreviations used: NATA: N-acetyl-L-tryptophanamide, DPA: 9,10diphenylanthracene, POPOP: 1,4-bis(5-phenyloxazol-2-yl)benzene, PPO: 2,5-diphenyloxazole, SPA: N-(3-sulfopropyl)acridinium. All solutions are deoxygenated by repetitive freeze–pump–thaw cycles or by bubbling N2 or Ar through the solutions.

c)The quoted errors are sample standard deviations s

 

 

X

 

 

 

1

 

n

2

 

s ¼

n 1 i

¼

1

ðti tÞ

.

 

 

 

 

 

 

d)Number of lifetime data measured.

e)Number of lifetime data used in the calculation of the mean lifetime t and its standard deviation s. The di erence between columns d and e gives the number of outliers.

where IkðtÞ and I?ðtÞ are the polarized components parallel and perpendicular to the direction of polarization of the incident light, and IðtÞ is the total fluorescence intensity.

For a homogeneous population of fluorophores, i.e. for fluorophores characterized by the same decay of IðtÞ and the same rðtÞ, the polarized components are

I

t

IðtÞ

½

1

þ

2r

t

ð

6:44

 

kð Þ ¼

3

 

 

ð Þ&

Þ

 

 

 

 

 

 

 

6.2

Time-resolved fluorometry

191

I

t

 

IðtÞ

½

1

 

r t

ð

6:45

 

 

 

 

?ð Þ ¼

3

 

ð Þ&

Þ

 

In the simplest case of a single exponential decay of the total fluorescence intensity, IðtÞ ¼ I0 expð t=tÞ, and a single rotational correlation time, i.e. rðtÞ ¼ r0 expð t=tcÞ, the polarized components are:

I

t

I0 expð t=tÞ

½

1

þ

2r

 

exp

ð

t=t

cÞ&

ð

6:46

 

kð Þ ¼

3

 

 

 

0

 

 

 

Þ

I

t

I0 expð t=tÞ

 

1

 

r

 

exp

 

t=t

 

Þ&

ð

6:47

 

?ð Þ ¼

3

½

 

0

ð

 

 

c

Þ

This can easily be extended to multi-exponential decays of IðtÞ and rðtÞ.

The emission anisotropy can be calculated from the experimental decays of the polarized components by means of Eq. (6.43), but only if the decay times are much larger than the width of the excitation pulse. Otherwise, Eq. (6.43) cannot be used because the responses RðtÞ ð¼ EðtÞ nIðtÞÞ and R?ðtÞ ð¼ EðtÞ nI?ðtÞÞ must be deconvoluted. Several methods can then be used to recover the parameters:

(i)the polarized components are analyzed by global analysis because the same decay times appear in both components (see for instance Eqs 6.46 and 6.47);

(ii)the curves RkðtÞ R?ðtÞ and RkðtÞ þ 2R?ðtÞ ð¼ RðtÞÞ are calculated from the experimental decays, RkðtÞ and R?ðtÞ, and then analyzed by a method including deconvolution. The drawback of this method is the poor signal-to-noise

ratio of the di erence curve;

(iii)the polarized components are deconvoluted separately without a priori assumption of the shape of the decays, e.g. using the sum of a large number of exponential terms. The constructed anisotropy from the fitting parameters, now free of convolution e ects, can be analyzed by curve fitting procedures. The advantage is that the constructed anisotropy does not contain the parameters of the total fluorescence intensity IðtÞ.

The case of several populations of fluorophores having their own fluorescence decay IiðtÞ and time constants characterizing riðtÞ deserves particular attention. In Section 5.3, it was concluded that an ‘apparent’ or a ‘technical’ emission anisotropy rðtÞ can be obtained by considering that the measured polarized components, IðtÞ and I?ðtÞ, are the sums of the individual components (i.e. of each population) and by using Eq. (6.43). Hence

X

rðtÞ ¼ fi ðtÞriðtÞ ð6:48Þ

i

where

192 6 Principles of steady-state and time-resolved fluorometric techniques

f

t

ai expð t=tiÞ

ai expð t=tiÞ

 

6:49

 

i ð Þ ¼

IðtÞ

¼ Pi

ai expð t=tiÞ

ð

Þ

6.2.7.2Phase-modulation fluorometry

Instead of recording separately the decays of the two polarized components, we measure the di erential polarized phase angle DðoÞ ¼ F F? between these two components and the polarized modulation ratio LðoÞ ¼ m=m?. It is interesting to define the frequency-dependent anisotropy as follows:

r

o

Þ ¼

LðoÞ 1

ð

6:50

ð

 

LðoÞ þ 2

Þ

At low frequency, rðoÞ tends towards the steady-state anisotropy, and at high frequency rðoÞ approaches r0, the emission anisotropy in the absence of rotational motions.

The following relationships are used for data analysis:

 

 

1 QkP? PkQ?

 

 

DðoÞ ¼ tan

 

 

 

 

ð6:51Þ

 

PkP? þ QkQ?

and

 

 

 

 

 

 

 

Pk2

þ Qk2

1=2

 

 

LðoÞ ¼

!

 

ð6:52Þ

P?2

þ Q?2

 

where Pk and Qk are the sine and cosine transforms of IðtÞ, and P? and Q? are the sine and cosine transforms of I?ðtÞ.

6.2.8

Time-resolved fluorescence spectra

Evolution of fluorescence spectra during the lifetime of the excited state can provide interesting information. Such an evolution occurs when a fluorescent compound is excited and then evolves towards a new configuration whose fluorescent decay is di erent. A typical example is the solvent relaxation around an excitedstate compound whose dipole moment is higher in the excited state than in the ground state (see Chapter 7): the relaxation results in a gradual red-shift of the fluorescence spectrum, and information on the polarity of the microenvironment around a fluorophore is thus obtained (e.g. in biological macromolecules).

Figure 6.14 shows how the fluorescence spectra at various times are recovered from the fluorescence decays at several wavelengths. The principle of the measurements is di erent in pulse and in phase fluorometry.

6.2 Time-resolved fluorometry 193

Fig. 6.14. Determination of the time evolution of fluorescence spectra.

In phase fluorometry, the phase (and modulation) data are recorded at a given wavelength and analyzed in terms of a multi-exponential decay (without a priori assumption of the shape of the decay). The fitting parameters are then used to calculate the fluorescence intensities at various times t1; t2; t3; . . . The procedure is repeated for each observation wavelength l1; l2; l3; . . . It is then easy to reconstruct the spectra at various times.

In pulse fluorometry, we take advantage of the fact that the amplitudes of the output pulses of the TAC are proportional to the times of arrival of the fluorescence photons on the photomultiplier. Selection of a given height of pulse, i.e. of a given time of arrival, is electronically possible (by means of a single-channel analyzer) and allows us to record the fluorescence spectra at a given time t after the excitation pulse. This is repeated for various times. The method described above for phase fluorometry can also be used in pulse fluorometry.

194 6 Principles of steady-state and time-resolved fluorometric techniques

Fig. 6.15. Decomposition of a fluorescence spectrum into its components.

6.2.9

Lifetime-based decomposition of spectra

A fluorescence spectrum may result from overlapping spectra of several fluorescent species (or several forms of a fluorescent species). If each of them is characterized by a single lifetime, it is possible to decompose the overall spectrum into its components.

Let us consider for instance a spectrum consisting of three components whose lifetimes, t1; t2; t3; . . . have been determined separately (Figure 6.15).

Decomposition of the fluorescence spectrum is possible in pulse fluorometry by analyzing the decay with a three-exponential function at each wavelength

IlðtÞ ¼ a1l expð t=t1Þ þ a2l expð t=t2Þ þ a3l expð t=t3Þ

ð6:53Þ

and by calculating the fractional intensities f1l; f2l and f3l as follows

 

fil ¼

ailti

 

ð6:54Þ

3

 

ailti

 

P

i¼1

The procedure in phase-modulation fluorometry is more straightforward. The sine and cosine Fourier transforms of the d-pulse response are, according to Eqs (6.30) and (6.31), given by

Pl ¼

 

f1lot1

 

þ

 

f2lot2

 

þ

 

f3lot3

 

ð6:55Þ

1 þ o2t12

1 þ o2t22

1 þ o2t32

Ql ¼

 

f1l

þ

 

f2l

þ

 

f3l

ð6:56Þ

1 þ o2t12

 

1 þ o2t22

 

1 þ o2t32

with

 

 

 

 

 

 

 

 

 

 

 

 

1 ¼ f1l þ f2l þ f3l

 

 

 

 

 

 

 

ð6:57Þ

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