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10.2 Classification of PSMs 191
the most abundant and structurally diverse natural com­pounds identified in plants, naturally occurring PSMs pre­sent in plant and flower essential oils. Terpenoids are found primarily in plants and flowers, and essential oils contain­ing terpenoids are used in perfumery and traditional medi­cine. Terpenoids can be present in varied plants and flowers, including eucalyptus, cinnamon, cloves, ginger, sunflowers, and tomatoes. Salvia divinorum, cannabis, and Ginkgo biloba are examples of plants rich in terpenoids. Terpenoids present a diverse range of complexity and bio­logical functions. They occur naturally in plants and play a protective role in them [10, 12].
Terpene synthases are cloistered from a diverse range of plant species, including gymnosperms and angiosperms. Thapsia laciniata has eight monoterpene and five sesquit­erpene synthases, somewhat more than Arabidopsis thali- ana and Artemisia annua. In addition, multiple sesquiterpene synthases from maize have been cloned and studied. Finally, plants and flowers are the primary natural sources of terpenoids, and essential oils containing these compounds are used in a range of industries. Terpenoids are a sizable class of natural chemicals with varied chemi­cal properties and applications. They are formed from iso­prene and its derivatives and are classified into seven types based on their carbon skeleton: hemiterpenes, monoterpe­nes, sesquiterpenes, diterpenes, sesterterpenes, triterpe­nes, and tetraterpenes (carotenoids). Terpenes have the same underlying five-carbon isoprene unit. Terpenoids are terpene derivatives that contain oxygen molecules, result­ing in different chemical properties and bioactivities. They neutralized free radicals, prohibiting inflammation and ulcers. Terpenoids, on the basis of special properties (anti­inflammatory and antioxidant), can reduce reactive oxygen species (ROS) and malondialdehyde (MDA) production while enhancing superoxide dismutase (SOD) activity in radical scavenging [10, 13].
Terpene synthases are responsible for the creation of ter­penoids, and small changes in their design can result in unique catalytic properties. The traditional route mostly produces sterols, sesquiterpenes, and ubiquinones, whereas the nonmevalonic acid pathway produces hemi-, mono-, sesquiterpenes, and diterpenes, as well as carotenoids and chlorophyll’s phytol tail. Many terpenoids have biological characteristics and are used in medicine. Artemisinin, vin­cristine, and taxol, for example, are used to treat malaria and cancer, whereas triterpenoids discovered in Momordica charantia and Elephantopus scaber have antidiabetic prop­erties. Cortistatin from the sea has significant antiangio­genic properties and may be useful in cancer and macular degeneration treatment. Terpenoids are frequently utilized in industrial applications, such as flavors, fragrances, and spices, as well as perfumery and cosmetics. They are com­mercially available and synthesized in the pharmaceutical
and chemical industries, and their applications range from increasing titers of value-added terpenoids to providing a platform for overproduction and broadening the chemical diversity of terpenoids [13].

10.2.3 Phenolic Compounds

PSMs containing a phenol moiety are chemically categorized as (a) phenolic acids, (b) flavonoids, (c) tannins, (d) cou­marins, (e) lignans, (f) quinones, (g) stilbenes, and (h) cur­cuminoids. The majority of soluble phenolic compounds (PCs) are produced in plants’ endoplasmic reticulum and fur­ther stored in vacuoles. Phenolic chemicals differ from one another by having at least one phenol unit, which is a benzene ring with a hydroxyl group. Plant PC may be soluble or bound. The transport of soluble PC to the cell wall causes the forma­tion of bound PC, which are then conjugated with cell wall macromolecules, such as cellulose and protein via ester and glycosidic bonds, assisting in cell wall construction. PC are present in all plant-based foods, beverages, fruits, and byprod­ucts. Plant materials include phenolics, which are antibacte­rial, anti-inflammatory, and antimutagenic, among other things. They demonstrate antioxidant and antimicrobial activities [14, 15, 16]. Furthermore, highly oxidized phenolic molecules can act as inhibitors, whereas pyrogallol and cat­echol, hydroxylated PC, are toxic to microorganisms. Examples with unusual names are vanillin, hydroquinone, salicylic acid, hydroquinone, pyrocatechol, resorcinol, cresol, and eugenol [17]. PC are a broad category of phytochemicals that may be classified into subgroups based on their chemical structures. Flavonoids, phenolic acids, and polyphenols are the three most significant types of dietary phenolics, with fla­vonoids being the biggest and most well studied category of plant phenols. Phenolic acids, on the other hand, constitute 60% of total dietary PC and are classified into many groups, including hydroxybenzoic and hydroxycinnamic acids [15, 18]. There are five major groups of PC found in fruits, which include:
1. Flavonoids: flavonoids account for 30% of total die-
tary PC [15].
2. Tannins: phenolic polymers, often known as tannins,
are high-molecular weight molecules that may be divided into two types: (a) hydrolyzable tannins and (b) condensed tannins [14, 18]. Tannins have the capacity to bind proteins and are extensively dispersed throughout the plant world.
3. Phenolic Acids: the phrase refers to PC with one car-
boxylic acid group. The most frequent plant PCs are phenolic or phenol carboxylic acids (also known as polyphenols). Plant-based foods contain them in high quantities, with seeds, fruit skins, and vegetable leaves being the most abundant [19].
192 10 Classification and Therapeutic Applications of Plant Secondary Metabolites
4. Stilbenes: stilbenes are phenolic chemicals found in
plant groups, such as Vitaceae, Leguminaceae, Gnetaceae, and Dipterocarpaceae. They have a C6-C2-C6 backbone and normally have two isomeric variants [20].
5. Lignans: lignans are phenolic dimers having the
structure 2, 3-dibenzylbutane. These compounds are known to appear as minor constituents in many plants, where they act as the basis for lignin formation in the plant cell wall. The compounds are often present in glycosidic form [18].
These compounds exhibited a variety of positive health impacts, which consist of antibacterial, anti-inflammatory, and antimutagenic activity. In conclusion, PC are a vast and varied category of phytochemicals that may be classi­fied into subgroups according to their chemical structures, with flavonoids and phenolic acids being the most frequent PC consumed [15].
PCs are organic molecules with a phenol functional group, giving them distinct physical and chemical properties. Because of their polar properties, phenols have higher boil­ing points than alcohols. Because the phenol group can form hydrogen bonds with water molecules, it is more soluble than alcohol, uncolored liquids, or white solids at room tempera­ture that can be highly toxic and corrosive. These compounds have a wide variety of industrial applications. Wood preserva­tives contain PCs mixes known as cresols, whereas substi­tuted PCs are utilized in dye sector to produce colored dyes (azo). PCs also make plastics, explosives, pharmaceuticals, and colors. Hydroquinone, a phenolic chemical, is employed in the photographic developing process [16]. When PCs mix with alcohols, they can undergo etherification reactions, yielding the appropriate phenolic ether. This reaction can be utilized to produce unique molecules with specific proper­ties. PC can also undergo etherification reactions with alkylating agents to form ether. These reactions are signifi­cant in organic synthesis and commercial applications because they enable the incorporation of additional func­tional groups into a molecule [14].

10.2.4 Glycosides

Glycosides are naturally occurring chemicals found in var­ied plant groups that play critical roles in living organisms. A glycoside is a chemical with a sugar linked to another functional group by a glycosidic bond. They are also known for antioxidant, antibacterial, antifungal, anti-inflamma­tory, antiviral, and anticancer effects. Plants are capable to store chemicals as inactive glycosides, which can be acti­vated via enzyme hydrolysis and also used as medications.
Glycosides are naturally occurring molecules made up of a carbohydrate and a hydroxy component, containing carbohydrates, such as cellulose, glycogen, or starch.
The carbohydrate component is commonly composed of one or more sugars or uric acid, whereas the hydroxy com­ponent is composed of a non-sugar substance or another carbohydrate. There are more than 11 distinct kinds of gly­cosides that include anthraquinone, cardiac, chromone, coumarin, cyanogenic, flavonoid, saponin, steroidal, and steviol glycosides. Glycosynthases are enzymes capable of forming vast numbers of glycosidic linkages. Hydrolysis of glycosides in the presence of acid or alkali can separate them into glycone and aglycone components. The most prominent enzymes involved in glycoside cleavage are gly­coside hydrolyses, while the most significant enzymes involved in glycoside synthesis are glycosyltransferases (GTs). Glycosides may be O-, N-, or S-linked, as well as gly­cosidic [22, 23, 24]. Glycoside hydrolysis produces a sugar hemiacetal or hemiketal as well as a free aglycon. Some enzymes can hydrolyze – linkages, whereas others can affect them. The orientation of the glycosidic bond deter­mines whether glycosides are – glycosides or – glycosides [22, 25]. Anthocyanins, for example, are glycosides that are frequently found in flowers and fruits. Senna, rhubarb, and aloe all contain glycosides. Glycosides are predominantly found in dicot plants, with the exception of the monocot family Liliaceae. They also possess laxative effects. The kind of glycoside, such as glucoside, fructoside, and glucuronide, is determined by the class of glycone, with biosides being a type of glycoside with a disaccharide glycine [22, 24]. Glycosides can be categorized in a variety of ways, depend­ing on the context. Glycoside hydrolyses, which break down glycosides, are classified into more than 100 classes based on sequence similarities. Carbohydrate-active enzymes (CAZy) database includes over 160 GH families, each with proteins connected by sequence and fold. In the CAZy data­base, the bulk of plant-glucosidases are classed as glycoside hydrolase family 1 (GH1), with a few classified as GH fami­lies 5 and 30. All of them are members of GH Clan A. The catalytic apparatus and molecular mechanism are substan­tially constant throughout most glycosidase families, with the mechanism used remaining consistent within a GH family. In addition to classification based on exo- or endo­enzymes, they can be classified as inverting or retaining enzymes based on how they respond. Categorized ones employ a NAD-dependent hydrolysis mechanism, whereas the GH97 family includes both retaining and inverting enzymes. The glycoside classification is always available via the CAZy database [25, 26]. Glycosides are substances that have a sugar molecule bonded to another molecule, which is often not sugar. Natural plant-derived glycosides have been utilized in several medical applications, but further study into their biological effects, bioavailability, and metabolism is needed before they may be used clinically to prevent or cure disorders. The N-glycan content of
10.2 Classification of PSMs 193
plant-produced recombinant enzymes may be precisely regulated with genetically modified plants, demonstrating glycosides’ promise in biotechnology applications [27]. Dietary glycosylated anthocyanins are absorbed intact and can penetrate the blood-brain barrier to reach multiple brain regions. In the small intestine, the enzyme SGLT1 absorbs quercetin glycosides. Understanding glycosides’ chemical and physical properties is crucial for maximizing their therapeutic value [26, 28].

10.2.5 Tannins

Tannins are naturally occurring polyphenolic chemicals classified as PC in many plant species, including flower­ing plant groups and coniferous trees. They are insoluble and resistant to disintegration, which makes them long­lasting. Tannins can be detected by texture and maturity characteristics, and they can seep out of plants, creating tannin-rich soil water with a dark color and a tea-like appearance. Tannins are large molecules that easily interact with proteins, cellulose, carbohydrates, miner­als, and saliva. They are complex chemical compounds derived from phenolic acids that have been investigated and examined [29, 30, 31]. However, current research suggests that tannins substantially impact the efficiency with which nutrients are transformed into new body components. Tannins, which are water-soluble polyphe­nols found in a variety of plant foods like grape skins, stems, and seeds, contribute to the flavor and structure of the wine, as well as its bitterness and astringency [30, 31, 32, 33]. Tannin-rich foods are thought to have little nutri­tional value while associating with some ailments, such as esophageal cancer, when ingested in tannin-rich foods like betel nuts and herbal teas. Tannins may be found in many places, including plants, meals, and drinks [31, 33]. Tannins come from grape skins, seeds, stems, wood, and winemaking additives [30]. Tannins from wood are absorbed by wines aged in oak barrels [5, 34]. Clay-rich soils add to the tannins in wine grapes, which causes astringency. Tannin can also be present in coffee and chocolate. The majority of human tannins are derived from tea and coffee [33, 34]. Tannins may be present in a variety of fruits, including apple, grape, and berry juices, as well as beer and legumes [29, 34]. The tannin content of legumes varies; red beans have the most tannin, while white beans have the least. Peanuts without shells have very low tannin levels. Tannins are generated during fer­mentation when juice, skin, and pips macerate together in oak barrels which are used to age red wine [29, 31, 34]. The longer the maceration period during and after fer­mentation, the more tannic the finished wine. Wooden fermentation and aging containers can be a source of
tannins in wine. Tannins can also be added to juices and ciders to make them more astringent. Tannic acid is uti­lized as an aroma component and clarifying agent in alcoholic and soft beverages or juices. The shape of tan­nin molecules can vary significantly depending on their source. Overall, tannins are a diverse group of chemical substances that can be found in a wide range of sources.
Tannins are polyphenolic macromolecules found natu­rally in plant components, such as seeds, bark, wood, leaves, and fruit skins [30, 34, 35]. They are complex chem­ical molecules composed of phenolic acids and categorized as PC [29] prominent for astringent flavor and able to bind and precipitate proteins and other molecules. These chem­icals successfully prevent herbivores and insects in woody blooming plants [36]. Tannins division as hydrolyzable tan­nins include gallic acid or ellagic acid esters that react with glucose or other polyols to create the necessary sugar and phenol while condensed ones are polymers made up of flavan-3-ol molecules connected by carbon−carbon bonds. Many foods and beverages contain tannins, including tea, coffee, grapes, and wine. Tannins in wine can be found in grape skins, seeds, stems, oak, and other components. Skin tannins get bigger as a result of polymerization [30, 31]. It is critical to underline that tannins are essential compo­nents that add to wine’s distinct flavor, and wine aficiona­dos must understand them [33, 37].

10.2.6 Saponins

Plants, certain bacteria, and lower marine species create saponins; which are surface-active glycosides. Saponins are found in many plants, but only a handful are harmful to mammals. Saponins are molecules that include a ster­oid or triterpenoid aglycone attached to one or more oli­gosaccharide moieties having bitter taste with astringency of plant materials, hub of natural plant chemicals, and their name stems from their capacity to produce soap­like foams in water. Saponins can form insoluble com­pounds with iron, zinc, and calcium. Saponins often have a carbohydrate side chain attached to the sapogenin’s three carbons. Saponins have hemolytic and foaming effects. Cholesterol in the diet can counteract the nega­tive effects of saponins, although saponins themselves may benefit by reducing serum and tissue cholesterol levels in experimental animals. Saponins with diverse biological as well as pharmacological properties and are key active principles in folk medicine, particularly tradi­tional Chinese medicine. Chemical synthesis provides a potential alternative to the use of natural saponins in medical research and development with reference to folk medicine [38, 39].
194 10 Classification and Therapeutic Applications of Plant Secondary Metabolites
Saponins are glycosides of triterpenes and steroids that exist in a variety of forms. Members of the soyasaponin fam­ily can be found in a variety of agriculturally important leg­umes, including soybeans. These soyasaponins appear in mono- and bisdesmosidic forms and have a pentacyclic oleane triterpene structure. Another kind of saponin discov­ered is avenin. The addition of a γ-pyronyl group alters the terminal monosaccharide of the C-22 sugar chain in several bisdesmosidic legume saponins. Chromosaponin I, a γ-pyronyl saponin found in soyasaponins, has been shown to enhance plant development via controlling auxin influx. Glycyrrhizin is a triterpenoid saponin produced from licorice that has a variety of medical purposes and is also used as a food sweetener. The primary bioactive components of gin­seng are triterpenoid ginsenoside saponins, whereas avidins are triterpenoid saponins derived from the Acacia victoriae tree that exhibit antitumor activity and a variety of physiolog­ical effects in mammalian cells [40]. Overall, saponins are a varied class of chemicals with numerous biological functions and potential medicinal applications.
Saponins are natural chemicals found in numerous plants, including food crops, such as soybeans and pota­toes. They have a wide variety of biological activity and play important ecological roles, from plant pest defense to cholesterol-lowering properties in humans. Interestingly, saponins are also found in fish-killing plants like the soap­berry plant, which is used for fishing by cultures all over the world [40, 42]. These saponins act as natural deter­gents, reducing the surface tension of water and causing fish to suffocate. Saponins, due to their amphipathic nature, can form micelles with hydrophobic molecules, such as cholesterol, causing emulsification and solubiliza­tion. As a result, saponins have been researched for their potential application as emulsifying agents in the food business and as drug delivery systems in the pharmaceuti­cal sector. Saponins are a fascinating subject of research due to their richness and diversity in nature, as well as their potential uses in a variety of industries.

10.3 Biosynthetic Pathways

PSMs are created in minute amounts to reduce metabolic costs, and their production paths are intricate and dynamic. More than a million PSMs have been identified in terrestrial and aquatic plants, indicating the variety of these molecules. Plant secondary metabolite biosynthesis generates a diverse spectrum of specialized chemicals that serve a variety of pur­poses, including herbivore defense, pollinator attraction, and environmental tolerance. Secondary metabolism in plants employs biosynthetic enzymes derived from basic metabolic
processes to synthesize complex molecules with varied struc­tures and activities. Secondary metabolism is generally less well known than primary metabolism, necessitating interdis­ciplinary and cross-disciplinary research collaborations to investigate the synthesis of PSMs [3, 43]. The usage of PSMs is crucial for sustainability and efficiency, demanding the study of their production pathways. In legumes, for example, isoflavone synthase, an enzyme that converts naringenin to genistein glycoconjugates, is involved in the production of isoflavone phytoestrogens. Metabolite profiling can help us understand the pathways of PSMs production, as evidenced by transgenic Arabidopsis plants containing the enzymes iso­flavone synthase and chalcone isomerase. Furthermore, jas­monates have been shown to have a significant role in initiating de novo transcription of related genes, such as phe­nylalanine ammonia-lyase, in the production of PSMs. The tricarboxylic acid cycle route produces nitrogen-containing molecules, while the mevalonic pathway produces terpenes and the shikimate pathway produces phenolic chemicals [44]. Thus, more comprehensive metabolite profiling meth­odologies may provide further information on changes in metabolic flux produced by heterologous overexpression of enzymes involved in plant secondary metabolism [3].

10.4 Environmental Factors Affecting PSMs

Environmental conditions have an important influence with reference to the formation of PSMs, such as salt works as a stressor in plants, inducing secondary metabolite pro­duction. Plants produce PSMs in response to salt, and a dis­turbance in one environmental element may affect the quantity of these metabolites even if other parameters remain consistent [45]. The shikimate pathway and the aro­matic amino acids it produces are important precursors. Light, temperature, soil, water, soil quality, and salt are some environmental factors that affect secondary metabo­lite deposition in plants. Abiotic and biotic elicitors in cul­ture systems promote the synthesis of PSMs. During the stress response, plants create PSMs that function as herbi­vore deterrents, pathogen barriers, and oxidative stress reg­ulators. Furthermore, stress activates the shikimate pathway, which produces tryptophan, tyrosine, and pheny­lalanine, boosting secondary metabolite production. Furthermore, the buildup of PSMs in response to stress is molecularly controlled by multiple genes and transcription factors. The amount of stress is proportional to the various PSMs accumulation in different plant sections [44]. Cell wall modifications can stimulate the creation of PSMs in cell cultures. The major four ranks of PSMs comprised of
10.6 Role of Enzymes in Plant Secondary Metabolite Production 195
terpenoids, PC, alkaloids, and sulfur-containing substances, and elicitors or feeding precursors can increase their forma­tion. PSMs have a variety of physiological and ecological effects, including antibacterial, attractant/repellent, and deterrent properties. Temperature, light, and metals might be strong factors to restore the PSMs formulation, and alu­minum exposure affects caffeine production in Coffea ara- bica cell cultures. In vitro cell cultures are a great technique to study biochemical and metabolic processes under care­fully regulated environmental conditions [46].

10.5 Genetic Factors Affecting PSMs

Several genetic mechanisms control plants’ secondary metabolite synthesis. Transcriptional factors (TFs) influ­ence downstream gene expression in plant defense path­ways. They sense stress signals and turn on downstream defense genes [47]. Mutations in the MEDa/b gene impact critical components of a large multisubunit transcriptional complex that controls phenylpropanoid biosynthesis genes. These genes are critical for the synthesis of PSMs during stress. Mutants that lack the atypical myrosinase PEN2, which is involved in glucosinolate breakdown, produce less Trp-derived metabolites. Similarly, mutants lacking the CYP83B1 enzyme make less of the phenylpropanoid sinapoylmalate. In addition, investigations have found that glucosinolates and benzoxazinoids impacts PSMs accumu­lation. Some Kelch Domain FBox genes involved in PAL inactivation are up-regulated in indole glucosinolate mutants, which is reliant on MED5. Furthermore, diverse diterpene hexose decorating patterns have been demon­strated to alter floral morphology, and inhibiting diterpene glycoside synthesis can affect bloom size and longevity. Furthermore, mutations that overproduce certain PSMs might affect plant development and growth, indicating that the function of some PSMs is reliant on spatiotempo­ral accumulation patterns [48]. Overall, genetics influences the formation of PSMs, controlling their activity and accu­mulation in response to varied stress circumstances. Genetic factors influence secondary metabolite production and regulation. The metabolic pathways involved in sec­ondary metabolite metabolism and synthesis are controlled by the bHLH and MYB transcription factor families. Overexpression of the VvbHLH1 gene in grapes can increase flavonoid concentrations and improve transgenic plant tolerance to abiotic conditions like dehydration and salt. MYB proteins also have a role in the production of anthocyanin and proanthocyanidin. Flavonoids, an impor­tant type, exhibit a variety of anti-abiotic characteristics,
including signaling and antioxidant activity [49]. Damage may have impacted the emergence of PSMs as defense reg­ulators. Damage may have influenced the evolution of PSMs as defensive regulators. PSMs may be influenced by genetic factors during defense activation [48]. The altered MEDa/b genes comprise essential elements of a vast multi­subunit transcriptional complex that controls genes involved in phenylpropanoid synthesis. As a result, genetic variables are vital in PSMs production.

10.6 Role of Enzymes in Plant Secondary Metabolite Production

Enzymes are playing major role in biosynthesis of PSMs, particularly artemisinin production in Artemisia annua. Several ways have been investigated to boost artemisinin synthesis, including the overexpression of genes, such as CYP71AV1, CPR, ADS, and ALDH1. Transgenic A. annua plants with β-caryophyllene synthase siRNA produce
54.9% more artemisinin than wild-type plants. This is because inhibiting processes that compete with artemisinin production is an efficient method for boosting output. Caffeine production also involves enzymatic activities such as methylation and oxidation events. Enzymes are respon­sible for the exact chemical processes that produce PSMs, and the heterologous expression of enzymes involved in caffeine biosynthesis could raise caffeine levels. Furthermore, caffeine production in coffee cell cultures depends on the activity of several enzymes [50].
The significance of enzymes in PSMs manufacturing could be noticed by mentioned findings that also offer insight into techniques for increasing their production. Their classification into several groups, each exhibiting its own production pathway and enzymatic activity. A wide range of enzymes catalyze secondary metabolite formation, including GTs, polyketide synthases (PKSs), nonribosomal peptide synthases (NRPSs), and a slew of other modifying enzymes [50, 51, 52]. Secondary metabolite biosynthesis enzymes are functionally conserved across plant species, as shown by the effective complementation of Arabidopsis fla­vonoid mutants with maize genes [53]. Enzymes are involved in the biosynthesis as shown in Figure 10.1. Secondary metabolite derivatives are essential components producing polyamines such as spermidine, spermine, and putrescine [46, 54]. Secondary metabolism generates a mas­sive number of specialized chemicals, believed to be over 200 000, from building blocks and biosynthetic enzymes obtained during primary metabolism [55].
Furthermore, secondary metabolite production is medi­ated by enzyme complexes [56]. As a result, knowing the
196 10 Classification and Therapeutic Applications of Plant Secondary Metabolites
Phenylalanine
PA L
Cinnamate
C4H
p-Coumarate
4CL
p-Coumaroyl-CoA
CHR
Isoliquiritigenin
Daidzein
IOMT
IFH
IFR
VTR
Glyceollins
Figure 10.1 Enzymes involved in the biosynthesis of some
important PSMs referring major role in plant defense [108].
CHS
CHI
Naringenin
IFS
Genistein
Salicylic acid
F3H
Dihydroavonol
Flavan 3, 4-diol
Anthocynanin
Lignin
RGAs, MAPKs IPP, EREs, JRE
Condensed tannins
role of enzymes in the biosynthesis (of PSMs) is critical for producing these molecules, which are extremely important in pharmaceutical and agricultural businesses.
studied for antibacterial properties. The zone of inhibi­tion, which is the region surrounding the circular well through which the plant extract is given, is used to evalu­ate antimicrobial activity [58]. Multiple freezing/thawing cycles and various light conditions showed no effect on the stability of the released metabolites; nevertheless, their antibacterial activity was considerably diminished after certain treatments [59]. Moreover, phytochemical research indicated the existence of PSMs such as tannins and flavonoids, which may help with antibacterial action. Many flavonoids are antibacterial, and PSMs such as flavo­noids may contribute to anti-Pseudomonas aeruginosa action. Ethanol extracts from plant materials have also been demonstrated to have antimicrobial characteristics, and various PSMs generated by plants have antibacterial potential [68]. It should be noted, however, that PSMs are slightly more efficient against Gram-positive bacteria than Gram-negative bacteria, with Gram-negative germs fre­quently having higher minimum inhibitory concentra­tions (MICs) than Gram-positive bacteria. Furthermore, specific components of natural extracts demonstrate vary­ing degrees of activity due to their chemical makeup, which might change depending on geographical origin and harvesting season [60].
2. Mechanisms of action of PSMs against micro-
organisms

10.7 PSMs Therapeutic Applications

Following are some therapeutics applications seen in PSMs:

10.7.1 Antimicrobial Properties

PSMs display a multitude of biological effects as many different phytocomponents inhibit bacteria in different ways, and they are found in varying concentrations in various plant parts. PSMs isolated from plants such as mosses and liverworts are effective producers of bioactive compounds with antibacterial properties. PSMs from plants may be employed to eliminate antibiotic-resistant microorganisms. As a result, future research should focus on discovering and understanding the routes that these PSMs follow [58, 59].
1. Exhibition of antimicrobial properties
PSMs have been shown to have antibacterial characteris­tics, suggesting that they might be a natural antibiotic source. Plant extracts and their constituents have been
PSMs are a natural source of antibacterial substances that have been used for centuries to treat a wide range of ill­nesses. These metabolites are classified roughly into three types: flavonoids and associated phenolic and polyphenolic compounds, terpenoids, and alkaloids. Among the PSMs studied, alkaloids and polyphenols manifested strong anti­bacterial activity averse to a wide range of pathogens, including bacteria and fungi [61, 62]. Another significant secondary metabolite, PC, has been shown to interact with a range of bacterial targets, including the cytoplasmic membrane. Other plant secondary compounds having antibacterial, antifungal, and anticancer effects include essential oils and saponins [63, 64]. Other PSMs, such as quinones, resins, steroids, tannins, and terpenes, have demonstrated various biological activities, including anti­bacterial properties [65]. It is worth noting that less than 1% of available plant species have been tested for potential antibacterial action, highlighting the largely unexplored potential of PSMs as a source of novel antimicrobial medi­cations [58]. Several primary or PSMs have previously been proven to have antibiotic properties against bacteria [60] highlighting their significance as a source of novel antimi­crobial medicines for the development of effective treat­ments for infectious diseases.
10.7 PSMs Therapeutic Applications 197

10.7.2 Anticancer Potential

PSMs are typically regarded as compounds that defend against environmental stresses and predators. They do, how­ever, possess pharmacological properties and have been discovered as potential sources of plant-based pharmaceuti­cals. The structure of these compounds has been modified to improve anticancer efficacy and selectivity while reducing toxicity and side effects. The three most prominent PSMs found in plants are flavonoids, phenolic acids, and alkaloids, which have a variety of bioactivities, including anticancer action [66, 67]. Furthermore, they have been shown to exhibit genoprotective capabilities, such as preventing DNA damage in healthy cells, as well as regulatory effects on metabolic and signaling pathways [68].
1. Exhibition of anticancer potential
PSMs have demonstrated promising anticancer capabili­ties, with natural alkaloids acting as a successful case study in cancer therapy. Some alkaloids are now undergoing clinical studies or are already on the market as anticancer medications. The molecular structure of natural alkaloids, such as betulinic acid, influences their anticancer effects [48, 67]. Betulinic acid has been demonstrated to have an antimetastatic impact on highly aggressive melanoma cells by blocking stearoyl-CoA desaturase (SCD-1), which is overexpressed in cancer cells. Betulinic acid can also inhibit the cell cycle during the G1 phase and significantly increase autophagy as a survival strategy in response to permeability transition pore opening and mitochondrial damage. Betulinic acid has a wide-ranging anticancer effect by boosting caspase activity and inhibiting both con­stitutive and inducible STAT3 phosphorylation, nuclear translocation, and DNA binding. Natural alkaloids have long been utilized to treat cancer, making them a potential class of phytochemicals for treatment. Furthermore, struc­tural changes might decrease the toxicity and negative impacts of PSMs while enhancing their absorption, distri­bution, metabolism, and excretion properties [67]. These mechanisms of action of PSMs in anticancer potential open further avenues for research and development of nat­ural product-based chemopreventive agents [68, 69].
betulinic acid, can help to prevent acquired chemoresist­ance. Additionally, tumor necrosis as well as betulinic acid factor-related apoptosis-inducing ligand (TRAIL) can be used to block the p53 signaling pathway and thereby pre­vent the development of liver cancer. Betulinic acid has also been shown to suppress multidrug resistance proteins, both in vivo and in vitro [67]. Vinca alkaloids and colchi­cine are two other PSMs with anticancer properties. These chemicals disrupt the mitotic cell cycle by interacting with the exchangeable GTP-binding region of two tubulin heter­odimers. This connection induces microtubule depolym­erization, which results in tubulin instability and disruption. Tubulin dynamics disruption causes pro­grammed cell death, often known as apoptosis. Vinorelbine, a vinca alkaloid, binds to tubulin, preventing cell growth. It slows microtubule development, resulting in increased length and shorter duration. Vinblastine and its derivatives interact with α- and β-tubulin, targeting cancer cells on both sides.
Vindoline, is a precursor of vinblastine, a cancer-fighting chemical originated from tabersonine. Vinblastine’s anti­cancer activity is derived from its interaction with tubulin, which suppresses mitosis during metaphase, interacts with microtubular proteins in the mitotic spindle, resulting in microtubule crystallization, mitotic arrest, or apoptosis. Lipophilic terpenoids and alkaloids compete to inhibit P-gp, multiple resistance-associated proteins 1, and breast cancer resistance protein in cancer cells. More polar phe­nols directly inhibit proteins in cancer cells [70]. Finally, vincristine sulfate binds to malignant cells, inhibits cell proliferation through tubulin dynamics altering ultimately influencing overall cellular processes [68].

10.7.3 Anti-inflammatory and Immunomodulatory Effects

PSMs have shown potential toward therapeutic effects of disease prevention and treatment, with compounds, such as glucosinolates from the Brassicaceae family showing anticancer effects and alkaloids from the Papaveraceae, Solanaceae, and Apocynaceae families showing antimicro­bial and immunomodulatory effects [71, 72].
2. Mechanisms of action of PSMs against cancer
cells
PSMs are recognized to have anticancer properties. Betulinic acid, for example, has been shown to have a strong synergistic effect with mithramycin A in suppress­ing cancerous cells in pancreatic cancer migration and invasion by reducing Sp1 and uPAR levels. Combining anticancer medications with chemosensitizers, such as
1. Exhibition of anti-inflammatory and immu-
nomodulatory effects
PSMs like polyphenols and phenolic acids have anti­inflammatory and immunomodulatory properties. The polyphenol Oenothein B, mostly found in Epilobium angustifolium, activates myeloid cells while also stimulat­ing innate lymphocytes such as bovine and human T and NK cells. This increases CD25 or CD69 expression and IFN
198 10 Classification and Therapeutic Applications of Plant Secondary Metabolites
production in bovine and human NK cells and γδT cells. Similarly, dihydroquercetin administration enhances immune function and boosts phagocytic and respiratory burst activity in gilthead sea bream. Plant PC have been shown to promote cell-mediated immune responses in numerous species [73]. Berberine and matrine from Sophora sp. have also been demonstrated to decrease inflammation by inhibiting COX-2 levels and PGE2 gener­ation, resulting in anti-swelling properties. Modulating inflammatory factors, such as TNF-α, IL-8, IL-6, MCP-1, INF-γ, and IL-17A in cells can ameliorate chronic colitis. Fritillaria spp. steroidal alkaloids suppress NO, IL-6, and TNF-α production in RAW264.7 cells via reducing LPS­induced phosphorylation and degradation of IκBα and JNK. Sinomenine and aconitine inhibit NF-κB activation and lower TNF-α, IL-6, and IL-1β levels, resulting in reduced LPS-induced acute lung injury in rats. Phenolic acids promote immunity by producing NO, ROS, and cytokines, such as TNF-α, IL-1β, IL-6, and IL-4. However, their low bioavailability diminishes their effectiveness. Conjugation with phospholipids is a successful technique for increasing bioavailability. In melanoma animal models, drugs containing phenolic acids can cause immunogenic cell death, which is a cooperative autophagy-based immu­nomodulatory mechanism. Terpenoids, including β-patchoulene and laurene can inhibit NF-κB, JNK, and ERK1/2 activation in IL-1β-stimulated human chondro­cyte cells. Soybean and quinoa saponins inhibit inflamma­tion by regulating COX-2, iNOS, MCP-1, TNF-α, NO, and IL-six levels in LPS-stimulated RAW264.7 cells [72]. To summarize, PSMs have anti-inflammatory characteristics along immunomodulatory properties through a variety of pathways, making them a proposed source for the inven­tion of novel therapeutics for inflammatory illnesses.
2. Study on potential and effects
Numerous plant-derived PSMs have been studied for their immunomodulatory and anti-inflammatory properties. For instance, the potent anti-inflammatory compound alli­cin is found in garlic. Onions (Allium cepa), which has higher quercetin content, also exhibit the same function. Research on the flavonoid quercetin’s anti-inflammatory properties has been extensive. The anti-inflammatory qual­ities of several flavonoids, including rutin, quercetin, and hesperidin, have been studied. Alkaloids have also been studied for their potential to reduce inflammation.
Alkaloids frequently include nitrogen in a heterocyclic ring. They are classified according to the kind of nitrogen atoms in their structures. Abutilon indicum has a large amount of quercetin, which has powerful anti-inflammatory qualities. Glycyrrhizic acid (18β-GL), the main bioactive component of licorice Glycyrrhiza glabra L. (Fabaceae), has
immunomodulatory activities [74, 75]. As a result, these PSMs may be employed instead of standard pharmaceuticals to treat inflammatory diseases.

10.7.4 Neuroprotective and Cognitive Benefits

Curcumin, quercetin, resveratrol, naringin, naringenin, and chalcones are all PCs. These chemicals have the poten­tial to treat neurological disorders, inflammatory illnesses, and aging. The therapeutic benefits of PC stem primarily from their antioxidant activity, free radical scavenging, metal ion chelation, gene expression modification, and interaction with cell signaling networks. Polyphenols alter antioxidant and anti-inflammatory signaling pathways, which reduce inflammation and oxidative stress, both of which are associated with neurological diseases. Carotenoids, another kind of plant secondary metabolite, have been shown to improve memory performance and reduce the incidence of dementia [76, 77].
Carotenoid consumption has also been linked to lower glutathione peroxidase (GPx) and SOD levels. Although the book does not clearly discuss how PSMs work in the brain, it is clear that these substances have biological impacts, including anti-inflammatory, immune system­boosting, and anti-carcinogenic properties. Clinical studies are now being done to evaluate the potential of phyto­chemicals in Alzheimer’s disease (AD). Sulfur-containing PSMs are another type of plant secondary metabolite that has shown promise in treating or preventing a number of neurological illnesses, including Alzheimer’s. The most thoroughly studied PSMs include terpenes, flavonoids, alkaloids, and sterols, which stimulate the brain’s seroton­ergic, noradrenergic, dopaminergic, or GABAergic neuro­transmission systems. While PSMs have significant biological actions, overstimulation of these systems might result in unwanted side effects. Therefore, clinical research on standardized extracts that have shown therapeutic effi­cacy in animal and human investigations is vital [76, 78]. Terpenes, flavonoids, alkaloids, and sterols are the most extensively investigated PSMs. They stimulate the brain’s serotonergic, noradrenergic, dopaminergic, and GABAergic neurotransmission systems. While PSMs have important biological functions, overstimulation of these systems may cause undesired side effects. As a result, it is necessary to do clinical research on standardized extracts that have demonstrated therapeutic effectiveness in animal and human studies [76, 78].
1. Exhibition of neuroprotective effects
PSMs are well-known for their neuroprotective capabili­ties, with several studies demonstrating their beneficial
10.7 PSMs Therapeutic Applications 199
effects on the nervous system. Formononetin, an active metabolite found in red clover, has been demonstrated to possess neuroprotective properties. One study found that formononetin reduces inflammation and neuronal hyper­excitability via blocking NMDA receptors and the CREB signaling pathway in the basolateral amygdala (BLA) [78]. Scopoletin, a coumarin derived from diverse plant species, exhibited considerable neuroprotective properties against glutamate-induced neuron cell damage and may be effec­tive in the treatment of AD [77]. Sulforaphane, found in cruciferous vegetables, has been shown to be neuroprotec­tive in animal models of acute and chronic neurodegenera­tive diseases. In a mouse stroke model, sulforaphane treatment reduced brain damage and edema while protect­ing the retinal pigment epithelium. It is also known to pro­tect dopaminergic neurons from mitochondrial poisons. [79]. Caffeic acid, a hydroxycinnamic acid present in many plant species, has been demonstrated to increase dopamine levels in the brain while decreasing the production of the inflammatory cytokines TNF and IL-1. It inhibits the expression of COX-2, iNOS, and NFB, which leads to con­siderable improvements in behavioral tests. Caffeic acid has neuroprotective characteristics in a rotenone-induced Parkinson’s disease rat model, lowering tau and GSK-3 phosphorylation and protecting cells against amyloid toxic­ity. Caffeic acid also reduces intracellular calcium and oxi­dative stress, contributing to its neuroprotective qualities against 5-S-cysteinyl-dopamine-induced damage. Many additional PSMs, including coumarins, flavonoids, alka­loids, and chromenes, have been demonstrated to exhibit neuroprotective characteristics, potentially due to differ­ences in chemical structures and mechanisms of action [77] indicating neuroprotective properties.
2. Mechanism of action
PSMs have been shown to enhance cognitive function. Caffeic acid, a plant-based secondary metabolite, demon­strated to lower ROS, has been found to improve cognitive function by increasing the levels of Nrf2 and HO-1, both of which have antioxidant and anti-inflammatory attributes. Caffeic acid has been shown in studies to prevent Aβ­related cognitive impairments in mice. Caffeic acid may improve cognitive performance by altering GSK3β activity [77]. A neurotransmitter required for memory and learn­ing, acetylcholine deficiency has been connected to cogni­tive diseases, including Alzheimer’s [79]. Through the Nrf2/Keap1/ARE pathways, some PSMs have the ability to activate or inhibit certain receptors or ion channels in the brain, hence influencing cognitive performance. For exam­ple, substance K, a terpenoid molecule derived from red ginseng, has been found to drastically increase memory functions in a neurotoxic animal model, while gypenoside
XVII has been shown to mitigate neurotoxicity generated by Aβ25-35 by activating the Nrf2/ARE pathways. Furthermore, by reducing oxidative stress and neuroin­flammatory activity, lycopene treatment might mitigate amyloidogenesis and cognitive deficits brought on by LPS [76, 79]. Gedunin works by blocking the NF-B and Nrf2 signaling pathways, which can help avoid neurotoxicity. Green tea extract’s epigallocatechin-3-gallate (EGCG) sign­aling reduces cognitive decline. EGCG has been shown in trials to prevent memory losses by decreasing neuroinflam­matory biomarkers, reducing oxidative stress, and prevent­ing astrocyte activation and cytokine increase in rats with heightened neuroinflammation and memory impairment. Green tea extract was studied for enhancing memory and learning deficits over an extended period of time while increasing antioxidant levels and hippocampal activity. A single pilot study has shown that EGCG affects cerebral blood flow, despite the majority of EGCG research being preclinical [80]. These results suggest that PSMs may be useful as a therapy to improve cognitive function.

10.7.5 Cardiovascular Health Benefits

Several cardiovascular health properties studied, particu­larly focusing on PSMs found in plants, such as flavonoids, polyphenols, and carotenoids, possess antioxidant effects, lowering the development of cardiovascular disorders, such as atherosclerosis and hypertension [81].
1. Exhibition of cardiovascular health properties
Platelet activation is an important phase in the thrombosis process, and several PSMs have been shown to influence blood clotting and platelet aggregation. PSMs can operate as molecular targets for certain signaling pathways involved in platelet activation and thrombotic events. Specific ago­nists can activate platelets by targeting specific platelet receptors, whereas AA derivatives, such as prostanoids and isoprostanes can influence VSMC contractile and prolifera­tive responses, as well as platelet aggregation. Platelets’ roles in signaling pathways are less well understood than those of nucleated cells in the human body. However, these findings suggest several phytochemical classes as potential platelet inhibitors with antithrombotic, antiplatelet, and fibrinolytic characteristics. Gardenia jasminoides J. Ellis, which contains iridoid glycosides and crocins, can prolong bleeding time while inhibiting platelet aggregation and thrombosis in rats, whereas geniposide and its metabolite genipin can prolong thrombotic occlusion time and plate­let aggregation by inhibiting phospholipase A(2) (PLA(2)) activity. Geniposide, a component of G. jasminoides, shows antithrombotic activity in mice. The most significant fam­ily of phytochemicals, flavonoids, is recognized for their
200 10 Classification and Therapeutic Applications of Plant Secondary Metabolites
venotonic activity, but the mechanism of action is unknown. However, certain phytochemicals suppress the AA cascade and its metabolites, which have a direct impact on platelet aggregation control [82]. Furthermore, the anti­platelet activity of coumarins is independent of any possi­ble interaction with blood coagulation, and this effect is limited to dicoumarols. Platelet aggregation can be reduced by medicines containing flavonoids and coumarins [83].
−1
Furthermore, at dosages larger than 100 mg kg
body weight, Umbilicaria esculenta methanolic extract inhibits ADP-induced platelet aggregation and greatly lowers thrombotic mortality or paralysis, whereas aspirin inhibits
−1
thrombosis at levels between 10 and 20 mg kg
. In a dose­dependent route, the U. esculenta extract shields mice against thrombotic mortality or paralysis brought on by collagen and adrenaline. There is no fibrinolytic activity seen in the U. esculenta extract. Rather than anticoagulant action, U. esculenta extract may have antiplatelet activity, which might explain its antithrombotic effect [83]. These results demonstrate plant-derived chemicals’ unique antithrombotic and antiplatelet properties, which may have enormous advantages in primary, secondary, and ter­tiary care. In the context of 3P medicine, accurate patient classification using predictive diagnostics is essential for tailored protection and therapies [82].
2. Mechanism of action
PSMs from plants have been shown to offer possible path­ways for lowering the risk of cardiovascular disease. Plant polysaccharides, for example, can raise serum insulin lev­els, reduce blood glucose levels, and enhance glucose toler­ance, hence lowering the risk of hyperglycemia. Phytochemicals, or complex plant components, have been shown to be effective in treating hyperglycemia and hyper­cholesterolemia [84]. The antidiabetic activity of phyto­chemicals is one putative way by which PSMs might reduce the risk of cardiovascular disease. Rhodiola rosea is a plant that includes chemical components with pharmacological and therapeutic effects that may help lower the risk of dia­betes-related cardiovascular problems [85]. A nephropro­tective effect of R. rosea extract has also been demonstrated. Furthermore, R. rosea extract can stimulate bone formation while blocking bone resorption, lowering the risk of early alveolar bone loss in diabetic rats, and regulating bone metabolism [86]. These findings show that PSMs might be a viable way to reduce the risk of cardiovascular disease.

10.7.6 Antioxidant and Antiaging Effects

Flavonoids, phenolic acids, lignans, tocopherols, and tannins are important bioactive compounds that serve as natural antioxidants in both plants and animals. These chemicals are
produced through biosynthesis in plants and possess a high antioxidant capability, protecting living organisms from a variety of ailments [87].
1. Exhibition of antioxidant and antiaging properties
Phenols and flavonoids exhibited pharmacological effects, including anti-inflammatory, cytotoxic, anticancer, and antidepressant characteristics. Several studies have found that dietary polyphenols, notably quercetin, can prevent collagen-stimulated platelet activation by blocking several glycoprotein VI signaling pathway components. Moreover, they have the ability to scavenge free superoxide radicals, which delays aging. Phenolic acids exhibit a range of phar­macological properties, such as heightened production of bile, reduced levels of lipids and blood cholesterol, and antimicrobial action directed against pathogens like Staphylococcus aureus. PSMs aid in disease prevention for both people and plants [87]. These metabolites are pro­duced from amino acids and carbohydrates via the basic glycolysis or shikimic acid pathway. Methylation, hydroxy­lation, and glycosylation are the processes that produce them. PSMs are essential for the metabolism of ROS and prevent important biomolecules from oxidizing uncontrol­lably. Moreover, these metabolites provide the cell with both passive and active stress resistance by acting as anti­oxidants [88]. Studies have demonstrated that specific compounds derived from plants can activate the ERK1/2 and AMPK pathways, lower serum levels of proinflamma­tory cytokines, such as IL-1, IL-6, and TNF-, suppress the expression of ICAM and macrophage chemostatic protein (MCP-1), prevent the activation of the NF-B pathway, and decrease the infiltration of inflammatory cells. PSMs also enhance insulin sensitivity and glucose tolerance. The potential of PSMs’ antioxidant activities in the creation of medicines has therefore been studied.
2. Mechanism of action
Before we can determine the therapeutic potential of PSMs as antioxidants, we must first identify their targets and path­ways. One method is to conduct both in vitro and in vivo anti- oxidant activity assessment studies while addressing disease etiology. To fulfill their goals, the low molecular weight anti­oxidants must have significant radical scavenging activity in vitro. Before studying plant extracts or antioxidants, it is important to identify major free radical-linked disease pathophysiology targets, such as mitochondrial failure. Furthermore, in silico approaches may be utilized to com­pare found antioxidants to speculated or known structural analogs of mitochondria-targeted antioxidants, allowing for a more tailored approach to antioxidant treatment. Once