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CHAPTER 15

Phytoestrogens in Drug Discovery: A Focus on Mechanisms of Action and Safety Assessment

BANCHA YINGNGAM
 
ABSTRACT
Compounds from plants with estrogen-mimicking properties, known as phytoestrogens, show potential for medicinal uses in the field of drug research. They are garnering more attention for their potential to modulate estrogen receptor responses and various molecular pathways, making them beneficial for addressing issues such as symptoms of menopause, bone density loss, and cancer. However, concerns persist regarding the safety of phytoestrogens due to their potential unintended effects on reproductive health, neuroendocrine function, and other physiological processes. This chapter presents a summary of the ways phytoestrogens operate in drug discovery, especially emphasizing their estrogenic effects and influence on cell signaling pathways. Additionally, safety concerns associated with phytoestrogen use will be discussed, including potential adverse effects and interactions with other medications. Finally , the chapter explores the potential for developing safer and more effective phytoestrogen-based therapies, emphasizing the importance of thorough safety assessment and clinical testing.
*
*Corresponding author

15.1 INTRODUCTION

In 1926, the term “phytoestrogen” was introduced, combining the Greek words “phyto”, meaning plant, and “estrogen”, referring to the hormone responsible for female fertility in vertebrates (Farhat et al., 2023). Phytoestrogen is classified as a functional term rather than a structural term since its chemical structure does not belong to the steroid family. These naturally occurring compounds have garnered attention in drug discovery due to
their potential therapeutic effects (Yingngam et al., 2021). Their form and/or function
bear resemblance to natural estrogen, and they can be identified in diverse plants, such as soybeans (Glycine max L.), white clover (Trifolium repens L.), red clover (Trifolium pratense L.), fennel (Foeniculum vulgare Mill.), flaxseed (Linum usitatissimum L.), white
356 
Kwao Krua (Pueraria candollei Benth.), and Wan Chak Modlook (Curcuma comosa Roxb.) (Yingngam et al., 2021; Ceccarelli et al., 2022; Warinsiriruk et al., 2022; Kiyama, 2023; Pourjafari et al., 2023). Phytoestrogens exhibit diverse biological activities, including estrogenic (Yingngam et al., 2021), antiestrogenic (Kiyama, 2023), and antiandrogenic effects (Pool et al., 2023), making them potential alternatives to hormone replacement therapy for managing menopausal symptoms (Karimi et al., 2023). Additionally, research suggests that phytoestrogens may reduce the likelihood of certain illnesses, including breast cancer (Al-Thamiree Mezban and Fox, 2023), cardiovascular disease (Kiyama, 2023), and osteoporosis (Mei et al., 2023), due to their estrogenic activity, which provides protective effects against these conditions. However, the exact mechanisms of action and optimal dosages for these potential health benefits are still under investigation. Furthermore, the use of phytoestrogens in drug discovery extends beyond managing menopausal symptoms and disease prevention (Xu et al., 2023). These compounds have been studied for their potential therapeutic effects in a range of other conditions, including diabetes (Jain et al., 2022; Kiyama, 2023), obesity (Kim et al., 2020), and neurological disorders (Rebe et al., 2023; Xu et al., 2023), due to their anti-inflammatory and antioxidant properties (Y en et al.,
2023), which could contribute to their potential therapeutic effects in these conditions.
The efcacy and safety of phytoestrogens in drug discovery have been extensively
studied. Various mechanisms of action have been proposed, including the activation of estrogen receptors (ERs), inhibition of aromatase activity, and modulation of steroid hormone metabolism (Swathi Krishna et al., 2022). However, the use of phytoestrogens as therapeutic agents remains controversial due to safety concerns and potential adverse effects, particularly in hormone-sensitive tissues. In recent years, numerous studies have
focused on exploring the potential therapeutic benets of phytoestrogens in drug discovery,
investigating their interaction with ERs, modulation of hormone metabolism, and effects on gene expression (Jing et al., 2023).
One of the most well-known mechanisms of action of phytoestrogens is their ability to bind to ERs and mimic the effects of endogenous estrogen. This mechanism has been extensively studied and is implicated in various potential therapeutic effects of phytoes­trogens, including the management of menopausal symptoms (Chiba et al., 2022). Moreover, certain studies have suggested that phytoestrogens may possess anticancer properties by inhibiting the activity of the aromatase enzyme (Tanideh et al., 2023), which is responsible for estrogen synthesis and serves as a target for many anticancer drugs (Torrens-Mas and Roca, 2020).
Despite the potential benets of phytoestrogens, their use as therapeutic agents remains
a subject of controversy due to concerns regarding safety and potential adverse effects. Of particular concern is the potential for phytoestrogens to increase the risk of breast cancer or other hormone-sensitive cancers, as well as their potential to disrupt normal endocrine system function (Chiba et al., 2022). It is important to acknowledge that the safety and
efcacy of phytoestrogens may vary depending on the individual and dosage administered.
Therefore, further research is necessary to gain a better understanding of the risks and
benets associated with phytoestrogens and to establish guidelines for their clinical use.
This chapter will provide an in-depth examination of how phytoestrogens work and
their safety assessment in the eld of drug discovery. It will address the challenges and
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opportunities associated with developing phytoestrogen-based therapeutics, including their potential applications in treating menopausal symptoms and other estrogen-related
disorders. The chapter will also highlight the latest research ndings and ongoing clinical trials in this eld, aiming to present a thorough overview of the current knowledge.
Additionally , the chapter will discuss potential future directions for utilizing phytoestrogens in drug discovery, shedding light on the opportunities and challenges that may emerge in this rapidly evolving domain. However, the focus of this chapter excludes the discussion of certain mycoestrogens, such as Fusarium spp. mycotoxins (specically zearalenone, zearalanone, zearalenols, and zearalanols) that belong to the class of resorcyclic acid lactones and possess estrogenic properties. These mycotoxins are produced as secondary metabolites by fungi in plants and grasses.

15.2 PHYTOESTROGENS AND ESTROGEN RECEPTORS

ERs are nuclear receptors essential for numerous bodily functions, including growth, development, and reproduction. The mechanism of action for ERs involves the induction of transcription through ligand-receptor complexes that dimerize in the nucleus, acting as ligand-induced transcription factors (Tanwar et al., 2021). ERs are composed of two distinct regions: the domain that binds to DNA and the domain that binds to ligands
(Seo et al., 2023). There are two main subtypes of ERs, ERα and ERβ, with distinct tissue distributions and functions (Ceccarelli et al., 2022). While ERα and ERβ share an
almost identical DNA-binding domain (DBD) of 97%, the overall amino acid sequences of their ligand-binding domains exhibit only 56% and 18% similarity, respectively (Seo et al., 2023). These receptors are encoded by separate genes located on chromosome 6 (6q25.1) and chromosome 14 (14q22-24) (Ceccarelli et al., 2022). Furthermore, they exhibit distinct tissue distributions and functions (Qi et al., 2023). Upon estrogen binding
to ERα or ERβ, the receptors undergo a conformational change, facilitating dimerization
and binding to distinct DNA sequences known as estrogen response elements (EREs) located in the promoters of the genes they target (Babiloni-Chust et al., 2022). This process leads to the recruitment of coactivator proteins, initiating the transcription of target genes (Ceccarelli et al., 2022).
Studies have demonstrated that phytoestrogens can have both positive and negative
effects on ER signaling. Phytoestrogens exhibit estrogenic effects, which can be benecial
for conditions such as osteoporosis and menopausal symptoms. However, high doses of phytoestrogens may disrupt the endocrine system and increase the risk of certain cancers (Farhat et al., 2023). Additionally, the effects of phytoestrogens on ER signaling may depend on the subtype of ER involved (Wang et al., 2021). For example, certain phytoes-
trogens, such as genistein and daidzein, show a greater binding preference for ERβ over ERα, which might elucidate their selective inuence on distinct physiological activities (Basu and Maier, 2018). Others, such as coumestrol and equol, have a higher afnity for ERα (Wang et al., 2021). The impact of phytoestrogens on different physiological processes can be inuenced by the relative expression and activity of ER subtypes in various tissues (Cho et al., 2021). In breast tissue, for instance, ERα is the dominant subtype
358 
associated with cell proliferation and tumor growth, while ERβ has a more protective role (Morozova et al., 2022). Consequently, phytoestrogens with a higher afnity for ERβ may provide breast tissue protection by inhibiting ERα activity and reducing cell proliferation. Similarly, in the cardiovascular system, ERβ is more highly expressed than ERα, and activation of ERβ has been shown to have protective effects on endothelial function and
decrease the risk of cardiovascular disease (Chen et al., 2020). Thus, phytoestrogens with
a higher afnity for ERβ may be advantageous for cardiovascular health.
There are signicant differences in the binding afnity of phytoestrogens for
ERs compared to endogenous estrogens. Endogenous estrogens, including estrone,
17β-estradiol, 16α-estriol, and estetrol (depicted in Figure 15.1), exhibit a stronger binding afnity for ERα than for ERβ (Seo et al., 2023). Estrone is the main type observed in postmenopausal women, while 17β-estradiol signicantly contributes to the functional processes in premenopausal women. The placenta synthesizes 16α-estriol by transforming
dehydroepiandrosterone and its sulfate, which are derived from the adrenal glands of both the fetus and the mother. The concentration of this hormone is maximized during pregnancy. Last, the fetal liver also creates the fourth form, estetrol, during pregnancy (Das et al., 2022). In contrast, phytoestrogens such as genistein and daidzein exhibit the opposite pattern. The binding of endogenous estrogens induces a conformational change that facilitates the recruitment of coactivator proteins and the activation of target genes (Tanwar et al., 2021). In contrast, phytoestrogens bind to ERs in a slightly different conformation, resulting in weaker recruitment of coactivators and less potent activation of target genes (Khan et al., 2022). Furthermore, endogenous estrogens undergo metabo­lism by the liver and other tissues, leading to the formation of metabolites with varying estrogenic activity. In contrast, phytoestrogens are metabolized differently, resulting in the production of metabolites with distinct estrogenic activity from those produced by endogenous estrogens (Khan et al., 2022).
To enhance reader comprehension, the author utilizes an in silico molecular docking technique to illustrate the manipulation of the binding pocket of ERs and selected phytoes-
trogens. Specically, AutoDock Vina was employed in this study to conduct molecular docking analyses on chosen isoavone aglycones (genistein and daidzein) with ERs (Huey et al., 2012). The X-ray crystal structures of ERα (PDB code 1A52) and ERβ (PDB code 2YJD) were retrieved from the Protein Data Bank (https://www.rcsb.org/). The three-dimensional structures of genistein, daidzein, and 17β-estradiol were acquired from PubChem (https://pubchem.ncbi.nlm.nih.gov/), and ChemDraw 3D (Cambridgesoft Inc.,
MA, USA) was utilized to perform energy minimization on these molecules. Subsequently , the docking study selected the pose with the lowest binding energy, and the interaction between the ligands and receptors was evaluated using Accelrys Discovery Studio 4.1
software (http://accelrys.com).
ERα has a molecular weight of 66 kDa and consists of 595 amino acids, while ERβ weighs 59 kDa and has 530 amino acids. The amino acid sequences of ERα and ERβ in humans are 44% identical. ERs can be divided into six functional domains: A/B, C, D (hinge region), E (ligand binding domain), and F. The A/B domains of ERα and ERβ share
only 17% homology. The C-terminal domain contains a conserved DBD with approxi-
mately 94% similarity between ERα and ERβ. The D domain serves as a hinge region and
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has a nuclear localization signal with approximately 36% homology. The E domain, or ligand-binding domain, plays a role in transactivation functions and shares a 59% struc-
tural resemblance between ERα and ERβ. Differences in ligand binding cavities between the two ER subtypes are due to specic amino acid positions. The F domain, with 18% homology between ERα and ERβ, protects the receptors against proteolysis. ERα acts as an activator, while ERβ inhibits ERα activity by forming a heterodimer. The ligand-binding pocket of ERα is characterized by specic amino acids, while ERβ has a smaller binding
pocket with different key amino acid residues (Das et al., 2022).
FIGURE 15.1 Chemical structures of three types of estrogens: estrone (E1), 17β-estradiol (E2), 16α-estriol (E
), and estetrol (E4). (ChemDraw 20.1.1).
3
⏎
Figure 15.2 illustrates the binding results of genistein and daidzein to the ER binding pockets. Based on the ranking of ligand binding energy, the best conformation is achieved
with 17β-estradiol, followed by genistein and daidzein. In ERα, the 4′-hydroxyl of genistein
forms hydrogen bonds with Glu353 and Ar g394, while the 7-hydroxyl group interacts with
His524 (binding energy = −9.40 kcal/mol). Similarly, in ERβ, the 4′-hydroxyl of genistein forms hydrogen bonds with Glu305/Arg346, and the 7-hydroxyl group interacts with His475 (binding energy = −9.20 kcal/mol) (Figure 15.2a). In contrast, daidzein adopts an opposite orientation, forming hydrogen bonds between its 7-hydroxyl and Glu353/Arg394 and between its 4′-hydroxyl and His524 in ERα (binding energy = −9.30 kcal/mol). In ERβ, hydrogen bonds are observed between the 4′-hydroxyl of daidzein and His475 and between its 7-hydroxyl group and Glu305/Arg346 (binding energy = −8.50 kcal/mol) (Figure 15.2b).
360 
The absence of a hydroxyl group adjacent to the carbonyl group in daidzein accounts for
this difference from genistein. Additionally, 17β-estradiol can bind to both ER binding
pockets through its 3- and 17-hydroxyls, similar to genistein, with the lowest binding ener-
gies of −10.70 and −9.80 kcal/mol for ERα and ERβ, respectively (Figure 15.2c). These
docking results suggest that the mechanism of action of both phytoestrogens could be attributed to weak interactions involving hydrogen bonds and van der Waals forces.
FIGURE 15.2 The molecular binding mode of genistein (a), daidzein (b), and 17β-estradiol (c) within the active sites of ERα (left side) and ERβ (right side). (Accelrys Discovery Studio 4.1).
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15.3 NONESTROGEN RECEPTOR-MEDIATED EFFECTS OF PHYTOESTROGENS

Phytoestrogens exhibit a range of biological effects beyond their actions as ER agonists or antagonists. They can influence other signaling pathways critical for cell growth, differentiation, and survival, including mitogen-activated protein kinase (MAPK),
phosphatidylinositol 3-kinase/serine/threonine kinase (PI3K/AKT), WNT, and G
protein-coupled ER. The following are a few examples of the non-ER-mediated effects of phytoestrogens on these signaling pathways.

15.3.1 MITOGEN-ACTIVATED PROTEIN KINASE (MAPK) PATHWAY

The mitogen-activated protein kinase (MAPK) pathway is a key intracellular signaling pathway that regulates various cellular processes, including proliferation, differentiation, and apoptosis. Phytoestrogens have been demonstrated to activate the MAPK pathway through the ER and other signaling intermediaries. One primary mechanism by which phytoestrogens activate the MAPK pathway is through ER phosphorylation. Upon binding to phytoestrogens, the ER undergoes a conformational change that activates downstream signaling intermediaries such as growth factor receptor-bound protein 2 and Src homology 2 domain-containing protein. These intermediaries then activate the Ras­Raf-MEK-extracellular signal-regulated kinase (ERK) cascade, leading to the activation of MAPKs, such as ERK 1/2. Activated MAPKs translocate to the nucleus and phos­phorylate various transcription factors, resulting in the expression of downstream target genes involved in cell proliferation, differentiation, and survival. Phytoestrogen-induced activation of the MAPK pathway regulates the expression of genes related to cell cycle progression (e.g., cyclin D1) as well as apoptosis and survival (e.g., Bcl-2 and AKT). Furthermore, the MAPK pathway interacts with other intracellular signaling pathways,
such as the PI3K/AKT pathway and the WNT pathway. Activation of the MAPK pathway
by phytoestrogens can influence these pathways, leading to the modulation of various cellular processes (Anjum et al., 2022).
Several phytoestrogens have been reported to activate the MAPK pathway (Ramachan-
dran et al., 2022). Genistein, an isoavone found in soybeans and soy products, was shown
to activate the MAPK pathway in osteoblasts, resulting in increased cell proliferation and differentiation, according to a review article by W u and Liu (2022). The study suggests that
genistein may have potential benets for bone health. However, while these studies indicate
the ability of phytoestrogens to activate the MAPK pathway , their effects on human health are still under investigation and not fully understood. Further research is necessary to fully comprehend the role of phytoestrogens in human health and disease.

15.3.2 PI3K/AKT PATHWAY

The PI3K/AKT signaling pathway plays a critical role in cancer development by promoting
cell growth, proliferation, and survival (Issinger and Guerra, 2021). Both estrogens and
362 
phytoestrogens have been shown to activate this pathway, resulting in various biological effects (Huang et al., 2023). The pathway is initiated by the binding of extracellular ligands to their respective receptors, such as ERs. This binding activates the receptor, leading to the recruitment and activation of PI3K, which phosphorylates phosphatidylinositol 4,5-bisphosphate (PIP2) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 then recruits and activates AKT, which phosphorylates several downstream targets,
including mTOR, GSK-3β, and FOXO transcription factors (Issinger and Guerra, 2021;
Zhao et al., 2021; Yang et al., 2022).
Dysregulation of this pathway has been observed by inhibiting the activity of PI3K and AKT, resulting in decreased cell proliferation and increased cell death (Issinger and Guerra, 2021). For instance, a study by Kuang et al. (2021) demonstrated that coumestrol
from soy blocks the mTOR/PI3K/AKT signaling pathway in skin cancer SKEM-5 cells.
The study showed that the activity of phosphorylated proteins (p-mTOR, p-PI3K, and p-AKT) was dose-dependently inhibited, while the activity of nonphosphorylated mTOR, PI3K, and AKT remained largely unaffected. This suggests that coumestrol modulates the
mTOR/PI3K/AKT signaling pathway in a specic manner in skin carcinoma cells.

15.3.3 WNT PATHWAY

The WNT signaling pathway plays a crucial role in regulating cellular processes, including proliferation, differentiation, and apoptosis. Estrogen has been found to modulate this pathway by binding to its receptors and inducing the expression of WNT tar get genes (Nie et al., 2020). One way estrogen regulates the WNT pathway is by promoting the stabiliza-
tion and accumulation of β-catenin, a key component of the pathway (Sharma and Nam,
2019). In the absence of WNT ligands, β-catenin is degraded by a destruction complex that includes APC, GSK3β, and axin. Estrogen inhibits the activity of GSK3β, leading to the cytoplasmic accumulation of β-catenin, which can then translocate to the nucleus and
activate WNT target genes (Bhukhai et al., 2012; Nie et al., 2020). Estrogen also interacts with other components of the WNT pathway , including receptors and downstream ef fectors (Qiu et al., 2020; Luo et al., 2022).
Some phytoestrogens, such as genistein, resveratrol, and 8-prenylgenistein (from G. max, Vitis vinifera and Herba epimedii), have been shown to activate the WNT pathway
(Qiu et al., 2020; Luo et al., 2022). Genistein inhibits GSK-3β, leading to the cytoplasmic accumulation of β-catenin (Luo et al., 2022), while resveratrol activates the WNT coreceptor
LRP6 (Elseweidy et al., 2021). 8-Prenylgenistein exhibits stronger osteogenic activity than
genistein, mediating its effects by inducing the WNT/β-catenin and ERα-associated PI3K/
AKT signaling pathways (Qiu et al., 2020).
ASPP 049, a diarylheptanoid found in C. comosa, has been shown to exhibit estrogen-
like activity and results in the ER/AKT/GSK-3β-dependent activation of the WNT/β-catenin
signaling pathway, which is associated with bone cell proliferation and differentiation. This suggests the potential use of ASPP 049 as an osteogenic agent to protect against osteoporosis in postmenopausal women (Bhukhai et al., 2012). Additionally, it may be used as a dietary supplement to prevent bone loss. The activation of the WNT pathway