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Файл:Ординатура / Хирургия / Библиотека им академика М.И. Перельмана / Книга_6035_Библиотеки_им_академика_М_И_Перельмана.pdf
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- •About the Editor
- •Contents
- •Contributors
- •Abbreviations
- •Preface
- •1. Natural Products as Drug Candidates
- •1.1 Introduction
- •1.2 An array of natural products
- •1.2.1 Plant-derived natural products
- •1.2.2 Microbial natural products
- •1.3 Importance of analytical techniques
- •1.3.1 A glance at extraction techniques
- •1.3.2 Microbial culturing techniques
- •1.3.3 Outlook and perspectives in nanoparticles
- •1.4 Natural products as a guide in drug design and synthesis
- •1.5 Natural products as promising drug candidates
- •1.5.1 Antiviral drug candidates
- •1.5.2 Antiparasitic drug candidates
- •1.5.3 Neuroprotective agents
- •1.6 Conclusion
- •Keywords
- •References
- •2. Traditional Knowledge for Drug Discovery
- •2.1 Introduction
- •2.2 Databases on indian remedial flora, indigenous medicines, and phytochemicals
- •2.2.1 Cultural preservation
- •2.2.2 Sustainable practices
- •2.2.3 Biodiversity conservation
- •2.2.4 Health and medicine
- •2.2.5 Climate change adaptation
- •2.2.6 Interconnectedness and wisdom
- •2.3 History of traditional knowledge
- •2.3.1 Indigenous healing practices
- •2.3.2 Aboriginal dreamtime
- •2.3.3 Traditional agriculture
- •2.3.4 Traditional crafts
- •2.3.5 Indigenous cosmologies
- •2.3.6 Traditional music and dance
- •2.3.7 Traditional navigation
- •2.4 Traditional medicine in plant formulations
- •2.4.1 Ayurveda
- •2.4.2 Traditional chinese medicine
- •2.4.3 Indigenous healing practices
- •2.5 Drug discovery
- •2.6 Aspects of developing plant-based drugs
- •2.6.1 Selection criteria for plants
- •2.6.2 Plant material authentication
- •2.6.3 Extraction methods
- •2.6.4 Isolation and structure elucidation of bioactive components
- •2.6.5 Standardization of plant formulations
- •2.7 Conclusions
- •References
- •3. Herbal Healing: Plant-Based Natural Products
- •3.1 Introduction
- •3.2 Classification of secondary metabolites
- •3.2.1 Phenolic compounds
- •3.2.2 Terpenes
- •3.2.3 Alkaloids
- •3.3 History of natural products
- •3.4 Drug discovery from natural products
- •3.5 Drugs derived from the plants
- •3.6 Conclusions
- •Keywords
- •References
- •4. Natural Products with Antimicrobial Properties
- •4.1 Introduction
- •4.2 Plants as antimicrobial agents
- •4.3 Marine sources as antimicrobial agents
- •4.4 Antimicrobial products derived from microorganisms
- •4.5 Conclusions and future trends
- •Keywords
- •References
- •5. Natural Products with Immunomodulatory Properties
- •5.1 Introduction
- •5.2.1 Aloe vera (l.) burm.f. (family: asphodelaceae)
- •5.2.2 Andrographis paniculata (burm. f.) wall.ex.nees. (family: acanthaceae)
- •5.2.3 Acorus calamus l. (family: araceae)
- •5.2.4 Allium sativum l. (family: alliaceae)
- •5.2.5 Azadirachta indica a. juss. (family: meliaceae)
- •5.2.6 Argyreia speciosa (l.f.) sweet (family: convolvulaceae)
- •5.2.7 Bidens pilosa l. (family: asteraceae)
- •5.2.8 Baliospermum montanum (willd.) müll.arg. (family: euphorbiaceae)
- •5.2.9 Boerhaavia diffusa l. (family: nyctaginaceae)
- •5.2.10 Boswellia serrata roxb. excolebr. (family: burseraceae)
- •5.2.11 Camellia sinensis (l.) kuntze (family: theaaceae)
- •5.2.12 Capparis zeylanica l. (family: capparidaceae)
- •5.2.13 Calendula officinalis l. (family: asteraceae)
- •5.2.14 Chelidonium majus l. (family: papaveraceae)
- •5.2.15 Carica papaya l. (family: caricaceae)
- •5.2.26 Glycyrrhiza glabra l. (family: leguminosae)
- •5.2.27 Hypericum perforatum l. (family: hypericaceae)
- •5.2.28 Hippophae rhamnoides l. (family: elaeagnaceae)
- •5.2.29 Hydrastis canadensis l. (family: ranunculaceae)
- •5.2.30 Jatropha curcas l. (family: euphorbiaceae)
- •5.2.31 Mangifera indica l. (family: anacardiaceae)
- •5.2.32 Mollugo verticillata l. (family: molluginaceae)
- •5.2.33 Matricaria chamomilla l. (family: asteraceae)
- •5.2.34 Momordica charantia l. (family: cucurbitaceae)
- •5.2.35 Morinda citrifolia l. (family: rubiaceae)
- •5.2.36 Nigella sativa l. (family: ranunculaceae)
- •5.2.37 Nelumbo nucifera gaertn. (family: nymphaeceae)
- •5.2.38 Nerium oleander l. (family: apocynaceae)
- •5.2.39 Ocimum tenuiflorum l. (family: labiatae)
- •5.2.40 Premna tomentosa willd. (family: verbanaceae)
- •5.2.41 Plantago sp. (plantago major l. and plantago asiatica l.) (family: plantaginaceae)
- •5.2.42 Psoralea corylifolia l. (family: fabaceae)
- •5.2.43 Prunella vulgaris l. (family: lamiaceae)
- •5.2.44 Punica granatum l. (family: punicaceae)
- •5.2.45 Rhinacanthus nasutus (l.) kurz (family: acanthaceae)
- •5.2.46 Salvia officinalis l. (family: lamiaceae)
- •5.2.47 Tamarindus indica l. (family: leguminosae)
- •5.2.48 Tinospora cordifolia (willd.) miers (family: menispermaceae)
- •5.2.16 Centella asiatica (l.) urb. (family: umbelliferae)
- •5.2.17 Cichorium intybus l. (family: asteraceae)
- •5.2.18 Cryptolepis dubia (burm.f.) m.r. almeida (family: apocynaceae)
- •5.2.19 Citrus aurantiifolia (christm.) swingle (family: rutaceae)
- •5.2.20 Curcuma longa l. (family: zingiberaceae)
- •5.2.21 Desmodium gangeticum (l.) dc. (family: fabaceae)
- •5.2.22 Eclipta prostrata (l.) (family: asteraceae)
- •5.2.23 Phyllanthus emblica l. (family: euphorbiaceae)
- •5.2.24 Evolvulus alsinoides (l.) (family: convolvulaceae)
- •5.2.25 Ficus benghalensis l. (family: moraceae)
- •5.2.49 Terminalia chebula retz. (family: combretaceae)
- •5.2.51 Urtica dioica l. (family: urticaceae)
- •5.2.52 Withania somnifera (l.) dunal (cultivated var.) (family: solanaceae)
- •5.3 Traditional importance of research to society and researchers
- •5.4 Conclusion
- •Keywords
- •References
- •6. Natural Products with Anticancerous Properties
- •6.1 Introduction
- •6.2 Plant-derived anticancer compounds
- •6.2.1 Polyphenols
- •6.2.2 Flavanoids
- •6.2.3 Brassinosteroids
- •6.2.4 Vinca alkaloids
- •6.2.5 Taxanes
- •6.2.6 Campothecin derivatives
- •6.3 Microorganisms-based anticancer compounds
- •6.3.1 Primary metabolites
- •6.3.2 Secondary metabolites
- •6.4 Selected medicinal plants with anticancerous activities
- •6.4.1 Curcuma longa l.
- •6.4.2 Viscum album l.
- •6.4.3 Colchicum autumnale l.
- •6.4.4 Raphanus sativus l.
- •6.4.5 Tinospora cordifolia wild
- •6.4.6 Nigella sativa l.
- •6.5 Therapeutic enzymes
- •6.6 Future perspective
- •6.7 Conclusion
- •Keywords
- •References
- •7. Natural Products with Antiviral Properties
- •7.1 Introduction
- •7.2 Source of natural products with antiviral activity
- •7.3 Main components of natural products
- •7.3.1 Flavonoids
- •7.3.2 Polyphenols
- •7.3.3 Polysaccharides
- •7.3.4 Terpenoids
- •7.4 Mechanisms of action of natural compounds in viral infections
- •7.4.1 Direct antiviral effect
- •7.4.2 Anti-inflammatory effect in viral infections
- •7.4.3 Effect on autophagy process
- •7.6 Conclusions
- •Keywords
- •References
- •8. Approaches to Develop Drugs from Natural Products
- •8.1 Introduction
- •8.2 Scenario of drug discovery
- •8.3 Efficient drug discovery engines
- •8.4 Drug discovery approaches using plants
- •8.4.1 Plant selection for screening purpose
- •8.4.2 Authentication of plants
- •8.4.3 Types of molecular markers
- •8.5.1 Parallel approach
- •8.5.2 Sequential approach
- •8.6 Structure elucidation of isolated compounds
- •8.7 Biological screening of extracts/fraction/isolates
- •8.7.1 Cell culture-based assay
- •8.7.2 Dialysis
- •8.7.3 Microdialysis
- •8.7.4 Ultrafiltration
- •8.7.5 Chromatography
- •8.7.6 Ligand fishing
- •8.8 Limitations
- •8.9 Molecular modelling and np database
- •8.10 Future thrust
- •8.11 Conclusion
- •Keywords
- •References
- •9. Strategies for Isolation and Identification of Bioactive Molecules from Natural Sources
- •9.1 Introduction
- •9.2 Bioactive compounds in natural sources and their pharmacological properties
- •9.3.1 Selection of materials
- •9.3.3 Types and properties of solvent for extraction
- •9.4 Extraction methods (conventional and modern)
- •9.4.1 Conventional methods
- •9.4.2 Novel extraction methods
- •9.5 Concentration and purification of bioactive molecules using chromatographic techniques
- •9.5.1 Separation based on adsorption properties
- •9.5.2 Separation based on partition coefficient
- •9.5.3 Separation based on the molecular size
- •9.5.4 Separation based on ionic strength
- •9.5.5 Other modern separation techniques
- •9.6 Identification and characterization of bioactive molecules
- •9.6.1 Qualitative and quantitative techniques/chromatographic or nonchromatographic techniques
- •9.7 Conclusions
- •Keywords
- •References
- •10. Role of Omics in Natural Product-Based Drug Discovery
- •10.1 Introduction
- •10.2 Genomics and transcriptomics in natural product discovery
- •10.2.1 Case studies and examples of natural product discovery using genomics and transcriptomics
- •10.2.2 Limitations and challenges of using genomics and transcriptomics in natural product discovery
- •10.3 Proteomics and metabolomics in natural product discovery
- •10.3.1 Case studies and examples of natural product discovery using proteomics and metabolomics
- •10.4 Bioinformatics in natural product-based drug discovery
- •10.4.1 Role of bioinformatics in natural product-based drug discovery
- •10.4.2 The use of bioinformatics to predict and annotate natural product biosynthetic pathways, gene clusters, and metabolomics
- •10.7 Future perspectives and potential impact of omics in natural product-based drug discovery
- •10.9 Potential impact on drug discovery and development
- •10.10 Conclusion
- •Keywords
- •References
- •11. Natural Products from Endophytic Microorganisms
- •11.1 Introduction
- •11.1.1 Rational/why endophytes?
- •11.2 Diversity of endophytic microorganisms
- •11.2.1 Endophytic bacteria and endophytic actinomycetes
- •11.2.2 Endophytic fungi
- •11.3.1 ISolation methods
- •11.3.1.1.1 Dilution Plating
- •11.3.1.1.2 Direct Plating
- •11.3.2 Identification methods
- •11.4 Bioactive compounds from endophytic microorganisms
- •11.4.1 Antibiotics
- •11.4.2 Antifungal agents
- •11.4.3 Antimalarial agents
- •11.4.4 Antiviral agents
- •11.4.5 Anticancer agents
- •11.4.6 Antioxidants
- •11.5 Stepwise methods for natural product discovery from endophytic microorganisms
- •11.5.1 Plant selection rationale
- •11.5.2 Isolation and cultivation of endophytes
- •11.5.3 Characterization of endophytes
- •11.5.4 Extraction of natural products
- •11.5.5 Purification of natural products
- •11.6 Biosynthesis and strategies for the optimization of natural product discovery from endophytic microorganisms
- •11.6.1 Exploration of novel microbial sources
- •11.6.2 Metabolomics-guided discovery
- •11.6.3 Coculture
- •11.6.4 Genome mining
- •11.6.5 Modulation by ultraviolent irradiation
- •11.7 Future directions and challenges
- •11.7.1 Improving the efficiency and accuracy of screening methods
- •11.7.2 Enhancing the scalability and affordability of production methods
- •11.7.3 Ensure natural product safety and efficacy
- •11.8 Conclusions
- •References
- •12. Natural Products with Antidiabetic Properties
- •12.1 Introduction
- •12.2 Natural products that regulate glucose absorption
- •12.2.1 Serotonin-derived products
- •12.2.2 Butyl-isobutyl-phthalate from laminaria japonica
- •12.2.3 Bioactive compounds of allium cepa and allium sativum
- •12.2.4 Elatosides E and F of aralia elata
- •12.2.5 Bioactive compounds of bauhinia candicans and bauhinia forficate
- •12.3 Natural products that enhance insulin sensitivity
- •12.3.1 Astragalus membranaceus polysaccharides
- •12.3.2 Bioactive compounds of litchi chinensis
- •12.3.3 Bioactive compounds of fenugreek
- •12.3.4 Bioactive compounds of cinnamon
- •12.3.5 Bioactive compounds of gastrodia elata
- •12.3.6 Polysaccharides of dioscorea
- •12.3.7 Anthocyanins of blueberries
- •12.3.8 Bioactive compounds of psidium guajava
- •12.4.1 Gingerol from zingiber officinale
- •12.4.2 Curcumin from curcuma longa
- •12.4.3 Berberine
- •12.4.4 Capsaicin of pepper
- •12.4.5 Bioactive compounds of bitter melon
- •12.4.6 Ginsenosides of ginseng
- •12.4.7 Bioactive compounds of aloe vera
- •12.4.8 Quinides of coffee
- •12.4.9 Bioactive compounds of tinospora cordifolia
- •12.4.10 Bioactive compounds of pterocarpus marsupium
- •12.4.11 Eugenol of ocimum sanctum
- •12.4.12 Bioactive compounds of syzygium densiflorum
- •12.5 Clinical trials based on antidiabetic effects of natural products derived from plants
- •12.5.1 Gymnema sylvestre (gurmar)
- •12.5.2 Fenugreek (trigonella foenum-graecum)
- •12.5.3 Tea catechins
- •12.5.4 Coffee
- •12.5.5 Rosemary (rosmarinus officinalis)
- •12.6 Conclusion
- •12.7 Future scope
- •Keywords
- •References
- •13. Marine-Derived Natural Products with Anticancer Properties
- •13.1 Introduction
- •13.2 Marine bioactive compounds
- •13.3 Anticancer activity of marine plants
- •13.4 Anticancer agents from marine floras
- •13.5.1 Antioxidants
- •13.5.2 Immunomodulation and apoptosis
- •13.5.3 Nutritional values and anticancer effects
- •13.6 Nature and cancer chemotherapy
- •13.7 Marine organisms and cancer chemotherapy
- •13.8 Anticancer agents from marine floras
- •13.9 Marine plants
- •13.9.1 Macro algae (seaweed)
- •13.9.2 Mangroves and other higher plants
- •13.9.3 Cyanobacteria
- •13.9.4 Bacteria
- •13.9.5 Proteobacteria
- •13.9.6 Cyanobacteria
- •13.9.7 Actinomycetes
- •13.9.8 Marine fungi
- •13.9.9 Soft corals
- •13.9.10 Marine sponges
- •13.10 Anticancer bioactive antibiotics derived from marine sources
- •13.10.1 Polyphenols
- •13.10.2 Polysaccharides
- •13.10.3 Alkaloids
- •13.11 Other marine sources for anticancer compounds
- •13.11.1 Peptides
- •13.11.2 Plitidepsin
- •13.11.3 Trabectedin
- •13.11.4 Lurbinectedin
- •13.12 Marine natural products as anticancer drugs
- •13.13.1 Aquaculture/cultivation
- •13.13.2 Genetic engineering
- •13.13.3 Synthesis/semisynthesis/modification
- •13.14 Conclusions and future prospects
- •References
- •14. Natural Products as Novel Opportunities for Cathepsin Inhibitors
- •14.1 Introduction
- •14.2 Cysteine proteases (CPs)
- •14.2.1 Cathepsin
- •14.2.2 Structure and mechanism of action of cathepsins
- •14.3 NPs as cathepsins inhibitors
- •14.3.1 NPs From bacteria as cathepsin inhibitors
- •14.3.2 NPs from fungus as cathepsin inhibitors
- •14.3.3 NPs from marine organism as cathepsin inhibitors
- •14.3.4 NPs from plants as cathepsin inhibitors
- •14.4 Conclusion and future pespectives
- •Keywords
- •References
- •15. Phytoestrogens in Drug Discovery: A Focus on Mechanisms of Action and Safety Assessment
- •15.1 Introduction
- •15.2 Phytoestrogens and estrogen receptors
- •15.3 Nonestrogen receptor-mediated effects of phytoestrogens
- •15.3.1 Mitogen-activated protein kinase (MAPK) pathway
- •15.3.2 PI3K/AKT pathway
- •15.3.3 WNT pathway
- •15.3.4 G-protein-coupled estrogen receptor (GPER)
- •15.4 Structure–activity relationship (SAR) of phytoestrogens
- •15.4.1 Isoflavones
- •15.4.2 Lignans
- •15.4.3 Coumestans
- •15.4.4 Stilbenes
- •15.4.5 Diarylheptanoids
- •15.5 Comparing potency and efficacy of phytoestrogens on various pathways
- •15.5.1 Potency and efficacy of phytoestrogens on different pathways
- •15.5.2 Possible synergistic effects of phytoestrogens with other drugs
- •15.6 Effects of phytoestrogens on the human organs
- •15.7 Safety Assessment of phytoestrogens
- •15.7.1 Toxicity assays used to evaluate the safety of phytoestrogens
- •15.7.2 Potential adverse effects of phytoestrogens
- •15.8 Case study
- •15.8.1 Vaginal cellular differentiation assay
- •15.8.2 Changes in rat body weight
- •15.8.3 Changes in rats’ uterus weight
- •15.9 Current trends in phytoestrogen research
- •15.9.1 Publication trends
- •15.9.2 Analysis of contributing countries and contributing institutions
- •15.9.3 Analysis of contributing publishers and journals
- •15.9.4 Publication evolution and research areas
- •15.9.5 Limitations
- •15.10 Future directions
- •15.10.1 Exploration of unexplored plant sources
- •15.10.2 Understanding mechanisms of action
- •15.10.3 Synthesis of novel compounds
- •15.10.4 Development of SPERMs
- •15.10.5 Safety assessment
- •15.11 Conclusion
- •Keywords
- •References
- •16. Honey Bee Products with Antimicrobial Properties
- •16.1 Introduction
- •16.2 Honey
- •16.3 Bee bread (perga)
- •16.4 Bee pollen
- •16.5 Bee propolis
- •16.6 Conclusion
- •Keywords
- •References
- •17. Natural Products for the Prevention of Leaky Gut
- •17.1 Introduction
- •17.2 The physical and chemical barriers of the intestine
- •17.2.1 Thick mucus layer
- •17.2.2 Intestinal epithelial cells (IECS)
- •17.2.3 Intestinal junctional complexes
- •17.2.4 Lamina propria
- •17.2.5 Intestinal regulatory T cells
- •17.2.6 Intestinal alkaline phosphatase
- •17.2.7 Antimicrobial peptides
- •17.2.8 Lysozyme
- •17.3 Mechanistic view of factors leading to a leaky gut
- •17.3.1 Gut dysbiosis
- •17.3.2 Mucosal inflammation and oxidative stress
- •17.3.3 TJ disruption
- •17.3.4 Genetics
- •17.3.5 Drugs
- •17.4 Pathological implications of a leaky gut
- •17.5 Natural product improving gut microbial dysbiosis
- •17.5.1 Traditional herbs and polyherbal formulations managing gut micro flora
- •17.5.2 Phytocompounds in the management of intestinal barrier integrity through balancing gut microflora
- •17.6.1 Anti-inflammatory traditional medicine and plant extracts ameliorating intestinal mucosal injury
- •17.6.2 Plant active constituents preventing mucosal injury and oxidative damage
- •17.7 Traditional medicine and natural products upregulating the TJ proteins
- •17.7.1 Traditional medicine and herbal extracts promoting junction protein protection
- •17.7.2 Phytocompounds for junction protein protection
- •17.8 Natural products averting pathological conditions through maintaining intestinal barrier function
- •17.9 Conclusion
- •Keywords
- •References
- •18. Role of Natural Products in the Pharmacotherapy of Osteoporosis
- •18.1 Introduction
- •18.1.1 Effect of traditional chinese medicine (TCM)
- •18.1.2 Effect of malay traditional medicine
- •18.1.3 Antiosteoporotic agents extracted from plant sources
- •18.1.4 Treatment by different pigments
- •18.1.5 Other herbal sources
- •18.1.6 Natural plant-based alkaloids
- •18.1.7 Essential markers involved in bone formation and resorption for osteoporosis treatment
- •18.2 Conclusion
- •Keywords
- •References
- •19. Gel-Based Natural Therapeutics: Potential Alternatives to Traditional Drug Delivery Systems in Aquaculture
- •19.1 INtroduction
- •19.2 DDS
- •19.2.1 Water medication
- •19.3 Oral administration
- •19.3.1 Gavage

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Preeti Sharma
Department of Floriculture and Landscaping Architecture, Dr. Y.S. Parmar University of Horticulture and Forestry, Neri,
Hamirpur, Himachal Pradesh, India
Kuldipika Sharma
Department of Forest Products, Dr. Yashwant Singh Parmar University of Horticulture and Forestry, Nauni, Solan,
Himachal Pradesh, India
Shakshi Sharma
Department of Geriatrics, Reynolds Institute of Aging, University of Arkansas for Medical Sciences, Little Rock, United States
Yash Pal Sharma
Department of Pharmaceutical Biology, Faculty of Pharmaceutical Sciences, UCSI University, Kuala Lumpur, Malaysia
Sanjula Sharma
Department of Plant Breeding and Genetics, Punjab Agricultural University, Ludhiana, Punjab, India
Anchal Sharma
Environmental Technology Division, CSIR-Institute of Himalayan Bioresource Technology, Palampur, Himachal Pradesh,
India
Nunavath Raja Shekhar
JSS College of Pharmacy, Ooty, Tamil Nadu, India
Soibam Khogen Singh
Krishi Vigyan Kendra, ICAR-Research Complex for NEH Region, Manipur Centre, Ukhrul, Manipur, India
Kanchan Singh
Department of Pharmaceutics, Faculty of Pharmaceutical Sciences, PES University, Bangalore, Karnataka, India
Nilay Solanki
Department of Pharmacology, Ramanbhai Patel College of Pharmacy, CHARUSAT Campus, Changa, Gujarat, India
Shweta Suri
School of Health Sciences and Technology, University of Petroleum and Energy Studies (UPES), Dehradun, Uttarakhand,
India
Tamanna
Department of Forest Products, Dr. Yashwant Singh Parmar University of Horticulture and Forestry, Nauni, Solan,
Himachal Pradesh, India
Saad Tayyab
Department of Pharmaceutical Chemistry, Faculty of Pharmaceutical Sciences, UCSI University, Kuala Lumpur, Malaysia
Meenakshi Thakur
Department of Basic Sciences, College of Horticulture and Forestry, Dr. Yashwant Singh Parmar University of Horticulture
and Forestry, Neri, Hamirpur, Himachal Pradesh, India
Ricardo Salomon Torres
Universidad Estatal de Sonora, Carretera, San Luis Río Colorado, Sonora, México
Gusheinzed Waikhom1
College of Fisheries, Central Agricultural University (Imphal), Lembucherra, Agartala, Tripura, India
Ruchi Yadav
Department of Pharmacology, Sardar Patel College of Pharmacy, Vadtal Bakrol Road, Bakrol, Gujarat, India
Bancha Yingngam
Department of Pharmaceutical Chemistry and T echnology, Faculty of Pharmaceutical Sciences, Ubon Ratchathani University,
Thailand

Abbreviations
AADT amino acid deprivation therapy
ABS access and benefit sharing
ABTS 2,2′-azinobis
ACL antioxidant capacity of lipid
ACN anthocyanins
ACTs artemisinin-based combination therapies
ACW antioxidant capacity of water
AD Alzheimer’s disease
ADMET absorption, distribution, metabolism, excretion, and toxicity
AFLPs amplified fragment length polymorphisms
AI artificial intelligence
AID accession ID
AJ adherens junctions
AKT protein kinase B
ALL acute lymphoblastic leukemia
ALP alkaline phosphatase
ALT alanine transaminase
AML acute myeloid leukemia
AMPs antimicrobial peptides
AP apigenin
APD antimicrobial peptide database
APP amyloid precursor protein
AR androgenic receptor
AraC cytosine arabinoside
AST aspartate transaminase
Aβ amyloid-beta
BBB blood–brain barrier
BDNF/NE brain-derived neurotrophic factor/norepinephrine
BGC biosynthetic gene cluster
BHL Biodiversity Heritage Library
BHT butylated hydroxytoluene
BMD bone mineral density
BMM bone marrow macrophage
BRENDA BRaunschweig ENzyme DAtabase
C3G cyanidin-3-glucoside
CAC colitis associated cancer
CAN central nervous system
CAS chemical abstracts service

xiv
Cath cathepsins
CBD convention on biological diversity
CBOL Consortium for the Barcode of Life
CC cyanidin chloride
CE capillary electrophoresis
CETSA cellular thermal shift assay
ChEMBL Ch European Molecular Biology Laboratory
ChemSpider database of chemicals
CLL chronic lymphocytic leukemia
CMNPD Comprehensive Marine Natural Products Database
CNS central nervous system
COVID coronavirus disease
CP cyclophosphamide
CPs cysteine proteases
CRC colorectal cancer
CSD Cambridge Structural Database
CVD cardiovascular disease
D3R delphinidin-3-rutinoside
DARTS drug affinity responsive target stability
DBD DNA binding domain
DDS drug delivery system
DGGE denaturing gradient gel electrophoresis
DHT dihydrotestosterone
DM diabetes mellitus
DMS dorso-median sinus
DMSO dimethyl sulfoxide
DNP dictionary of natural products
DOX doxorubicin
DPPH 1,1-diphenyl-2-picrylhydrazyl
DSCG crude phlorotannins
DSS dextran sulfate sodium
DTH delayed-type hypersensitivity
EAAE enzyme-assisted aqueous extraction
EAE enzyme-assisted extraction
EBOV Ebola virus
eEF1A elongation factor 1
eEF1A2 eukaryotic elongation factor 1 alpha 2
ELISAs enzyme-linked immunosorbent assays
EO essential oil
ER estrogen receptor
ERE estrogen response element
ERK extracellular signal-regulated kinase
ESI electrospray ionization
EtOAc ethyl acetate

xv
FCC Fufangkushen colon-coated capsule
FGF fibroblast growth factor
FOX2 cyclooxygenase 2
FPIC free, prior, and informed consent
FRAP ferric reducing antioxidant power
FT fosfomycin trometamol
FTIR Fourier transform infrared spectroscopy
FUNGIDB fungi database
GAGs glycosaminoglycans
GC gas chromatography
GCMS gas chromatography-mass spectrometry
GFC gel filtration chromatography (GFC)
GLP-1 glucagon-like peptide 1
GLUT4 glucose transporter type 4
GNPS global natural products social molecular networking
GPCR G protein-coupled receptor
GPER G protein-coupled estrogen receptor
GPs glycoproteins
GSH glutathione
GT glycosyltransferase
HA humoral antibodies
HAAs host-acting antivirals
HBV hepatitis B virus
hCMV human cytomegalovirus
HD Huntington's disease
HF hollow fiber
HIV-1 human immunodeficiency virus type-1
HNM 1-hydroxy-1-norresistomycin
HPLC high-performance liquid chromatography
HRT hormone replacement therapy
HSV herpes simplex virus
HTS high-throughput screening
IAP intestinal alkaline phosphatase
IBD inflammatory bowel disease
ICBG International Cooperative Biodiversity Groups
IECs intestinal epithelial cells
IFN interferon
IGF-1 insulin growth factor-1
IHR Indian Himalayan Region
IL interleukin
IMPPAT Indian medicinal plants, phytochemistry and therapeutics
IPR intellectual property rights
ISSRs intersimple sequence repeats
ITS internal transcribed spacer

xvi
IUCN International Union for the Conservation of Nature
JNK Jun N-terminal kinase
KF kahalalide F
LAMP loop-mediated isothermal amplification
LMOs living modified organisms
LPS lipopolysaccharides
MAbs monoclonal antibodies
MAE microwave-assisted extraction
MAP mitogen-activated protein
MAPK mitogen-activated protein kinase
MARV Marburg virus
MD molecular distillation
MDR multidrug resistant
MEEP macerated ethanolic extract of Indian propolis
MF membrane filtration (MF)
MIC minimal inhibitory concentrations
MM multiple myeloma
MMC mitomycin C
MMPs matrix metalloproteinases
MNPD marine natural products database
MRSA methicillin-resistant Staphylococcus aureus
MS mass spectrometry
MSCs mesenchymal stem cells
MSSA methicillin susceptible S. aureus
NA nutrient agar
NADPH nicotinamide adenine dinucleotide phosphate
NAFLD nonalcoholic fatty liver disease
NAP network annotation propagation
NBT Nitroblue Tetrazolium Test
NCBI National Centre for Biotechnology Information
NCCs novel chemical compounds
ND neurodegenerative disease
NDDS nanodrug delivery systems
NEI-MPDB North East India Medical Plants Database
NF-B nucleus kappa B
NMR nuclear magnetic resonance
NP natural products
NPACT natural products activity and compound tracker
NPASS Natural Product Activity and Species Source database
NPAtlas natural products atlas
NPC1 Niemann-Pick C1
NPOT nematic protein organization technique
NPs natural products
NRPS nonribosomal peptide synthase

xvii
OC osteocalcin
OCC occludin
OPG osteoprotegerin
OPN osteopontin
OSADHI Online Structural and Analytics based Database for Herbs of India
PBMCs peripheral blood mononuclear cells
PC partition chromatography
PCL photochemiluminescence
PCR polymerase chain reaction
PD Parkinson’s disease
PDA potato dextrose agar
PDB protein data bank
PEFE pulsed electric field extraction
PHA phytohemagglutinin
PHAs polyhydroxyalkanoates
PI3K phosphoinositide 3-kinase
PIC prior informed consent
PICP carboxy (C-) terminal propeptide
PINP amino (N-) terminal propeptide
PKS polyketide synthase
PL piperlongumine
PLE pressurized liquid extraction
PMA phorbol myristate acetate
QS quorum sensing
QSAR quantitative structure–activity relationship
RANKL receptor activator of NF-Kb
RAPD randomly amplified polymorphic DNA
RC red clover
Rf retention factor
RFLP restriction fragment length polymorphism
RNAi RNA interference
ROS reactive oxygen species
RT retention time
S6K S6 kinase
SAR structure–activity relationship
SARS-CoV-2 severe acute respiratory syndrome coronavirus 2
SCARs sequence characterized amplified regions
SCFAs short-chain fatty acids
SCFE supercritical fluid extraction
SEC size exclusion chromatography
SEMD secondary metabolite database
SHR self-help group
shRNA short hairpin RNA
siRNA small interfering RNA

xviii
SLS sodium lauryl sulfate
SME Salvia miltiorrhiza
SMs secondary metabolites
SN sinomenine
SOD superoxide dismutase
SPERM selective phytoestrogen receptor modulators
SPI soy protein isolate
SRBC sheep red blood cells
SSF solid-state fermentation
STZ streptozotocin
TCM traditional Chinese medicine
TEK traditional environmental knowledge
TGF transforming growth factor
THIQ tetrahydroisoquinoline
TJ tight junctions
TJP tight junction protein
TLC thin-layer chromatography
TNF-α tumor necrosis factor-alpha
TNP trinitrophenyl
TOXNET The Toxicology Data Network
TPP thermal proteome profiling
TRAP tartrate-resistant acid phosphate
T-RFLP terminal restriction fragment length polymorphism
TrxR thioredoxin reductase
TSA tryptic soy agar
UAE ultrasound-assisted extraction (UAE)
UC ulcerative colitis
UTI urinary tract infections
VISA intermediate resistance to vancomycin
WT wortmannin
YMA yeast mannitol agar
ZO zonula occludens

Preface
The book, Natural Products in Drug Discovery: Benefits, Challenges, and Opportunities
combines the potential of traditional medicine with the modern techniques for using products
derived from natural sources such as plants, microbes, and marine sources as the basis for
drug development. Natural products are rich in bioactive compounds which can be explored
for drug development. This book, therefore, will serve as a useful reference for biochemists,
phytochemists, pharma R&D professionals, students, and researchers working in the field
of drug discovery from natural sources.
Bioactive compounds present in natural products (including galantamine, elliptinium,
and huperzine from plants; daptomycin from microbes; and citarabine, cryptophycins,
bryostatin-1 from marine organisms) are the main components of medicines. They possess
various activities such as antimicrobial, anticancer, anti-inammatory, antiviral, antidiabetic, hepatoprotection, immunomodulatory, neuroprotection, etc., and exhibit a great
variability in their chemical structures. Natural products, their semisynthetic derivatives,
and synthetic compounds inspired by natural products now form the majority of drugs in
use for humans and animals. This book covers the various aspects of drug discovery from
natural products derived from plants, microorganisms, and marine organisms. The main
attraction of the book includes the information on bioactive potential of these natural
products such as antimicrobial, immunomodulatory, anticancerous, anti-inammatory,
hepatoprotective, antiviral, etc., and their usage in drug development. In this book, recent
techniques used for the isolation and identication of bioactive ingredients from natural
sources have also been covered. It reviews the latest developments in the eld of genomics,
transcriptomics, proteomics, and metabolomics for harnessing these natural products for
commercial applications. Current status of bioprospection and commercialization of
natural products-based drugs has also been reviewed.
Novel drug development is a complex, labor intensive, and costly process. For novel
drug discovery new chemical entities (NCEs) are identied which possess the requisite
quality of druggability and medicinal chemistry . These NCEs can be synthesized chemically
or isolated from natural products such as plants, fungi, bacteria, and marine sources.
Traditional knowledge can also be utilized for the selection of the sources of NCEs which
can be used for further investigations thereby facilitating drug discovery. Therefore, the
aim of the book is to review recent developments in natural products-based drug discovery .

CHAPTER 1
Natural Products as Drug Candidates
TOOBA MAHBOOB1, MOGANA SUNDARI RAJAGOPAL1, and SAAD TAYYAB
1
2
2,*
*Corresponding author
ABSTRACT
Growing infectious and noninfectious diseases are a major threat to human health and
well-being. The treatment of these diseases with higher efficacy and lesser side effects
is considered a gigantic challenge. Many diseases such as coronavirus-2019, human
immunodeficiency virus infection/acquired immunodeficiency syndrome, hepatitis, Ebola
virus disease, influenza, malaria, hypertension, diabetes, and cancer are associated with
potential mortalities and morbidities worldwide despite the development of drugs for their
treatment and management. The urgent need to find novel drugs, particularly from natural
products is warranted. This chapter deals with an array of natural products from plant and
microbial sources, the importance of analytical techniques, and natural products as a guide
in drug design and synthesis as promising drug candidates.
1.1 INTRODUCTION
Natural products are chemical entities derived from living organisms. They have been the
most promising source of potential drug candidates. Nonetheless, natural products isolated
from both plants and microbes continue to have fascinating and unique structural diversity
and complexity as compared to synthetic drug candidates (Dias et al., 2012). As less than
15% of the global biodiversity has been assessed for biological applications, a lot of lead
compounds present in natural products anticipated their discoveries as potential drug leads.
Natural products, obtained from plants and microbes, are the leading originator of drugs
against many fatal diseases including cancer, diabetes, and microbial infections. Traditional
medicines have been dominated by modern medicine as the mode of medical care for
human diseases. However, the use of traditional medicinal plants has increased again over
the last few years. In developed countries like the United Kingdom, Germany, France, and
so on prescription drugs are based on many medicinal plant extracts. Interestingly, about

2
bc
one-third of the Food and Drug Administration (FDA)-approved drugs have commenced
from natural products and their derivatives (Thomford et al., 2018). The major sources
of bioactive natural products are plants which cover about 80% of total known bioactive
compounds, whereas 20% of them are isolated from marine organisms like corals, snails,
sponges, and tunicates as well as from bacteria and fungi (Thirumurugan et al., 2018).
1.2 AN ARRAY OF NATURAL PRODUCTS
1.2.1 PLANT-DERIVED NATURAL PRODUCTS
Medicinal plants have been utilized as a vital source of therapeutics for millions of years.
The urge to find therapeutics from plant-derived natural products is still in progress.
Though natural product-derived therapeutics were related to some intrinsic factors, the
focus of pharmaceutical industries shifted from natural product-derived therapeutics
toward laboratory-synthesized therapeutics (Anulika et al., 2016). Consequently , there has
been a limited supply of effective therapeutics in the market because the results obtained
from laboratory-based therapeutics are far behind in meeting the expectations of new
therapies. These circumstances captured the attention of medical scientists in the use of
natural product-based therapies again despite their great intricacy . The Austrian Drugs from
Nature Targeting Inflammation program focuses on the identification and characterization
of natural products possessing anti-inflammatory action with the help of a combination
of computational techniques, ethnopharmacological uses, and phytochemical composition
(Atanasov et al., 2015). Many secondary metabolites have been isolated from traditional
plants and are known to exhibit pharmacological properties mainly antimicrobial activities
(Table 1.1) and antitumor activities (Table 1.2).
The existence of medicinal plants dates back to 2600
when first written records on
medicinal plants were reported in Mesopotamia, containing around 100 plant-derived
medicines. The second oldest plant-derived medicines were reported in Egypt in 2900 bc
and considered as most preserved and useful records of the traditional history of about 700
drugs specifically of plant origin. Among others, traditional Chinese medicine has been
comprehensively recorded over thousands of years, and the Indian Ayurveda system was
reported back to the 1st millennium bc (Atanasov et al., 2015; Anulika et al., 2016).
The information on the restorative utilization of medicinal plants in the Western world
is essentially founded by the Greeks and Romans. Lately , Arabs played an important role in
the preservation of Greco-Roman knowledge of traditional medicine during the Dark and
Middle Ages and supplemented with their therapeutic knowledge and with Chinese and
Indian traditional medicinal herbs. During that time, the application of traditional medicine
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