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implicated in C. albicans’ ability to withstand oxidative, nitrosative, and thermal stress. Catalytic stress is linked to fatty acid metabolism, cell wall remodelling, and oxidative stress response. One of the requirements for surviving in a high NaCl environment is glycerol buildup and a decrease in ribosomal biogenesis (Jacobsen etal. 2018). Candida promotes ORF19.7296 transcription in an environment of cat­ionic stress, although complete expression of the transcription is dependent on Hog1p and Sko1p (HOG signalling components) (Marotta et al. 2013). SLP3 expression rises in response to a variety of environmental stressors. SLP3 transcrip­tion is elevated in response to stress and in the presence of high NH4+concentra­tions (Kaloriti etal. 2014). SLP3, however, is downregulated in response to heat stress and the yeast-to- hyphae transition (Chaillot et al. 2015). It was discovered that, in the yeast phase, but not in the hyphal phase, SLP3 is a signicant gene that mediates stress response factor (Conrad etal. 2018). A decrease in the amount of short-chain fatty acids produced by fungi because of stress induced by antibiotics leads to an increase in C. albicans colonization of the gastrointestinal tract (Guinan etal. 2019).
S. Sahoo and K. H. Rao
6.11 Adherence toSurfaces
One of the main stages of candidiasis is adherence to host surfaces. It is necessary for early colonization and survival before infection starts. Adhesins are proteins that regulate adherence. In Candida albicans, the most prevalent adhesins are produced by the ALS gene. The glycoproteins of which ALS-3 seems to be the most signi­cant are encoded by eight sets of ALS genes. Moreover, Hwp1 is among the most signicant adhesins (Nobile etal. 2009). Adhesion is also regulated by a few non­adhesin proteins, including Cbk1, Svn41, and Pga1 (de Groot etal. 2013) which has been shown in Fig.6.2. Als-3 is increased in response to mucosal epithelial infec­tion. Als-3 is also crucial for the production of biolms because it promotes cell adhesion (Liu and Filler 2010).

6.12 Conclusion

Candida sp. emerged as major fungal pathogens causing infections ranging from supercial mucocomisal disease to systemic candidiasis. It has become very imper­ative to understand various molecular cues and mechanisms responsible for patho­genesis in the model fungus Candida albicans. The essential elements needed for Candida species’ virulence and pathogenicity include a number of “transcriptional factors, metabolic pathways, morphology-associated/virulence encoding genes, biolm formation, phenotypic switching, host microbiota composition, and a host of other virulence traits.” Creating new antifungals requires careful consideration for the different pathogenic pathways. There has been signicant progress in our knowledge of the processes behind Candida pathogenesis, as evidenced by the abundance of published data that highlights contemporary therapy methods.
6 Molecular Cues andMechanisms ofPathogenesis inCandida
169
Ultimately, further advancements in our comprehension of the processes underlying Candida pathogenicity will have a signicant impact on the treatment of candidiasis.

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173
Factors Affecting Drug Resistance andVirulence inFungal Pathogen
PreetiSharma, DeepikaKumari, PammiKumari, AntreshKumar, andRituPasrija
Abstract
The rising incidence of fungal infection has increased morbidity, as well as mor-
tality rate in the population, especially in individuals with impaired immune sys-
tems and those admitted to hospitals for extended periods (nosocomial infections).
Fungi can result in infections both on the skin, or fatal invasive infections. The
overuse of broad-spectrum antibiotics has made matters more complex and has
resulted in the emergence of drug resistance among species. Besides being a
eukaryotic pathogen, numerous tness traits and virulence characteristics, such
as mutation and overexpression of efux pumps, various enzyme activities,
dimorphism, and biolm formation contribute to challenges related to the treat-
ment of fungal infections.
This chapter addresses the various fungal traits contributing to the pathoge-
nicity and virulence of different species, including Candida and Aspergillus.
7
Keywords
Candida · Fungal pathogens · Drug resistance · Antifungals · Multi-drug resis-
tance · Aspergillus
P. Sharma · D. Kumari · P. Kumari · R. Pasrija (*) Department of Biochemistry, Maharshi Dayanand University, Rohtak, Haryana, India
A. Kumar Department of Biochemistry, Central University of Haryana, Mahendergarh, India
© The Author(s), under exclusive license to Springer Nature Singapore Pte Ltd. 2024 S. Hameed, P. Vijayaraghavan (eds.), Recent Advances in Human Fungal Diseases, https://doi.org/10.1007/978-981-97-4909-6_7
175
176
P. Sharma et al.

7.1 Introduction

The kingdom of fungi is diverse and includes yeasts, molds, and fungi found in vari­ous ecosystems such as soil, water, and air. Out of them, many species cause disease in humans, and the majority of infections are caused by species of infections includ­ing Candida, Aspergillus, Cryptococcus, Histoplasma, and Pneumocystis (Bongomin etal. 2017). As fungi are opportunistic pathogens, they are often over­looked as a source of infection, resulting in more than 1.7 billion supercial infec­tions per year and 1.5 million deaths, as well as a signicant nancial burden. Further, any underlying disease and invasiveness can lead to mortality in 30–90% of cases (Bongomin etal. 2017). Immunocompromised people, such as those suffering from HIV/AIDS or cancer or undergoing organ transplants, are susceptible to fun­gal infections. In addition, insufcient drug targets for eukaryotic pathogens limit pharmacological options and the development of resistance further complicates therapeutic measures (Berman and Krysan 2020). Depending on the spread of the infection, fungal infections can be categorized as either supercial or systemic (Brown etal. 2012). The infections that reach organ systems and spread through the blood are systemic, while supercial infections are limited to the skin, hair, and nails and are caused by dermatophytes or molds. Although supercial infections are not dangerous, they can be unpleasant and cause aesthetic problems (Brown etal. 2012).
Candida species are at the top of the list of total infections and cause both super­cial (mucosal and skin infections) and systemic infections (Papon etal. 2013). Common species associated with candidiasis are Candida albicans, Candida parap- silosis, Candida tropicalis, Candida glabrata, Candida krusei, and Candida auris. Next is Aspergillus spp., and depending on the host’s immunological system, it leads to numerous infections in humans. The Aspergillus species that cause infec­tions in humans are Aspergillus fumigatus, Aspergillus avus, Aspergillus terreus, Aspergillus niger, and Aspergillus nidulans. People with compromised lung func­tion, such as those with asthma or cystic brosis, might develop allergic broncho­pulmonary aspergillosis, a hypersensitivity reaction to fungal components. Repeated interaction with conidia can cause non-invasive aspergillomas, which may be due to underlying pulmonary cavities such as healed lesions in patients with tuberculosis (Dagenais and Keller 2009). The encapsulated fungus Cryptococcus neoformans infects both humans and animals. C. neoformans may spread to the blood and enter the central nervous system if the immune system is unable to keep it in the lungs. This might result in deadly meningoencephalitis. (Chen etal. 2022). The fungal infections are treated with three primary antifungal classes, including azoles, poly­enes, and echinocandins (Fairlamb et al. 2016). Azoles target lanosterol 14α-demethylase (encoded by ERG11), which is essential for ergosterol biosynthe­sis, an important component of the fungal cell membrane (Hossain etal. 2022). Azole resistance has already been observed in clinical samples and molecular anal­yses suggest that either mutations in the target enzyme or increased expression of efux pumps that eject the drug from the cell are the main cause. Polyenes, such as amphotericin B (AmpB), bind and sequester ergosterol and form membrane pores
7 Factors Aecting Drug Resistance andVirulence inFungal Pathogen
177
that lead to death. Polyene resistance results from a decrease in ergosterol content or a change in fungal membrane lipid composition, which reduces the binding afn­ity of the drug to the membrane (Mesa-Arango etal. 2016). Echinocandin targets the β-(1,3)-D-glucan synthase (FKS1 gene) in the cell wall, and resistance forma­tion involves alteration of the target enzyme or drug efux. However, mutations in the FKS1 gene leading to reduced afnity of the drug or reduced activity of the enzyme have also been reported in clinically resistant isolates (Perlin 2015).
Apart from resistance, many other factors contribute to the virulence and patho­genicity of different fungal species that may be unique to the species. For example, some fungi produce enzymes (e.g. Sap (secreted aspartyl proteases) in C. albicans), allowing their survival and multiplication in the host by damaging tissues and com­promising the host’s immune system (Angiolella 2022). Capsule formation and melanin synthesis are major problems in cryptococcal infections, etc. Other fungal proteins, including adhesins and mannoproteins, help them to adhere to and colo­nize the host tissue. In addition, morphological changes, quorum sensing, and the formation of biolms make it easier for fungi to survive and manifest the infection (Vila etal. 2020). The main factors contributing to fungal resistance and virulence are summarized in Figs.7.1 and 7.2. In this chapter, all these properties are dis­cussed in detail in the following sections.
Fig. 7.1 Schematic representation of the factors responsible for resistance to antifungal drugs
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Fig. 7.2 Different resistance mechanisms in fungi to available antifungals. (a) Overexpression of efux transporters in response to exposure to antifungals. (b) Mutation in the target gene ERG11 upon exposure to azoles and echinocandins. (c) Overexpression of HSPs. (d) Alteration of cell wall composition. (e) Mutation in the Fks1/2 proteins in response to echinocandin exposure. Abbreviation: HSPs Heat Shock Proteins
P. Sharma et al.
7.2 Factors Influencing Drug Resistance andVirulence
ofFungal Pathogens
7.2.1 Overexpression ofEfflux Transporters
Overexpression of drug pumps is the most important change in resistant fungal isolates. These pumps are protein transporters that belong to either the ABC super­family (ATP-binding cassette) or the MFS (major facilitator superfamily) (Holmes etal. 2016). Overexpression of ABC transporters has already been described in vari- ous pathogenic fungi, including C. albicans, C. neoformans, and A. fumigatus (Maenchantrarath etal. 2022). ABC proteins consume the energy from ATP hydro­lysis to deliver the drugs. MFS transporters, on the other hand, use an electrochemi­cal proton gradient to eject substrates (Prasad and Rawal 2014).
The fact that 1–3% of archaeal genomes encode ABC transporters speaks to the fact that the ABC family is the largest protein family discovered to date (Wilkens
2015). Multi-drug resistance (MDR), i.e. resistance to drugs that have neither the
same structure nor the same target, is often found in association with ABC trans­porters (Beis 2015). A typical ABC transporter comprises two nucleotide-binding domains (NBDs): NBD1 and NBD2, and two transmembrane domains (TMDs): TMD1 and TMD2, which constitute a canonical fungal ABC transporter. The CaCdr1p of C. albicans was discovered in 1995 when the C. albicans genomic