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Bioregenerative Engineering Principles and Applications - Shu Q. Liu

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1036 REGENERATIVE ENGINEERING FOR CANCER

Nabel GJ, Nabel EG, Yang ZY et al: Direct gene transfer with DNA-liposome complexes in melanoma: Expression, biologic activity, and lack of toxicity in humans, Proc Natl Acad Sci USA 90:11307–11, 1993.

Gonzalez R, Atkins M, Schwarzenberger P et al: Phase II trial of HLA-B7 plasmid DNA/lipid (Allovectin®) immunotherapy in patients with metastatic melanoma, Proc Am Soc Clin Oncol 20:1007, 2001.

Rubin J, Galanis E, Pitot HC et al: Phase I study of immunotherapy of hepatic metastases of colorectal carcinoma by direct gene transfer of an allogeneic histocompatibility antigen, HLAB7, Gene Ther 4:419–25, 1997.

Carcinoembryonic Antigen (CEA)

Brandriff BF, Gordon LA, Tynan KT, Olsen AS, Mohrenweiser HW et al: Order and genomic distances among members of the carcinoembryonic antigen (CEA) gene family determined by fluorescence in situ hybridization, Genomics 12:773–9, 1992.

Nishi M, Inazawa J, Inoue K, Nakagawa H, Taniwaki M et al: Regional chromosomal assignment of carcinoembryonic antigen gene (CEA) to chromosome 19 at band q13.2, Cancer Genet Cytogenet 54:77–81, 1991.

Thompson JA, Pande H, Paxton RJ, Shively L, Padma A et al: Molecular cloning of a gene belonging to the carcinoembryonic antigen gene family and discussion of a domain model, Proc Natl Acad Sci USA 84:2965–9, 1987.

Willcocks TC, Craig SP, Craig IW: Assignment of the coding sequence for carcinoembryonic antigen (CEA) and normal cross-reacting antigen (NCA) to human chromosome 19q13, Ann Hum Genet 53:141–8, 1989.

Zimmer R, Thomas P: Mutations in the carcinoembroyonic antigen gene in colorectal cancer patients: Implications on liver metastasis, Cancer Res 61:2822–6, 2001.

Zimmermann W, Ortlieb B, Friedrich R, von Kleist S: Isolation and characterization of cDNA clones encoding the human carcinoembryonic antigen reveal a highly conserved repeating structure, Proc Natl Acad Sci USA 84:2960–4, 1987.

IL12

Kass E, Schlom J, Thompson J, Guadagni F, Graziano P et al: Induction of protective host immunity to carcinoembryonic antigen (CEA), a self-antigen in CEA transgenic mice, by immunizing with a recombinant vaccinia-CEA virus, Cancer Res 59:676–83, 1999.

Tsang KY, Zaremba S, Nieroda CA, Zhu MZ, Hamilton JM et al: Generation of human cytotoxic T cells specific for human carcinoembryonic antigen epitopes from patients immunized with recombinant vaccinia-CEA vaccine, J Natl Cancer Inst 87:982–90, 1995.

Conry RM, Khazaeli MB, Saleh MN et al: Phase I trial of a recombinant vaccinia virus encoding carcinoembryonic antigen in metastatic adenocarcinoma: Comparison of intradermal versus subcutaneous administration, Clin Cancer Res 5:2330–7, 1999.

Conry RM, Allen KO, Lee S, Moore SE, Shaw DR et al: Human autoantibodies to carcinoembryonic antigen (CEA) induced by a vaccinia-CEA vaccine, Clin Cancer Res 6:34–41, 2000.

Hodge JW, McLaughlin JP, Kantor JA, Schlom J: Diversified prime and boost protocols using recombinant vaccinia virus and recombinant non-replicating avian pox virus to enhance T-cell immunity and antitumor responses, Vaccine 15:759–68, 1997.

Marshall JL, Hawkins MJ, Tsang KY et al: Phase I study in cancer patients of a replicationdefective avipox recombinant vaccine that expresses human carcinoembryonic antigen, J Clin Oncol 17:332–7, 1999.

Zhu MZ, Marshall J, Cole D, Schlom J, Tsang KY: Specific cytolytic T-cell responses to human CEA from patients immunized with recombinant avipox-CEA vaccine, Clin Cancer Res 6: 24–33, 2000.

BIBLIOGRAPHY 1037

B7.1

Freeman GJ, Disteche CM, Gribben JG, Adler DA, Freedman AS et al: The gene for B7, a costimulatory signal for T-cell activation, maps to chromosomal region 3q13.3-3q21, Blood 79:489–94, 1992.

Reiser J, von Gersdorff G, Loos M, Oh J, Asanuma K et al: Induction of B7-1 in podocytes is associated with nephrotic syndrome, J Clin Invest 113:1390–7, 2004.

Selvakumar A, Mohanraj BK, Eddy RL, Shows TB, White PC et al: Genomic organization and chromosomal location of the human gene encoding the B-lymphocyte activation antigen B7, Immunogenetics 36:175–81, 1992.

Shah R, Banks K, Patel A, Dogra S, Terrell R et al: Intense expression of the B7-2 antigen presentation coactivator is an unfavorable prognostic indicator for differentiated thyroid carcinoma of children and adolescents, J Clin Endocr Metab 87:4391–7, 2002.

Stamper CC, Zhang Y, Tobin JF, Erbe DV, Ikemizu S et al: Crystal structure of the B7-1/CTLA-4 complex that inhibits human immune responses, Nature 410:608–11, 2001.

Horig H, Lee DS, Conkright W et al: Phase I clinical trial of a recombinant canarypoxvirus (ALVAC) vaccine expressing human carcinoembryonic antigen and the B7.1 co-stimulatory molecule, Cancer Immunol Immunother 49:504–14, 2000.

Fakhrai H, Shawler DL, Gjerset R et al: Cytokine gene therapy with interleukin-2-transduced fibroblasts: Effects of IL-2 dose on anti-tumor immunity, Hum Gene Ther 6:591–601, 1995.

Sobol RE, Shawler DL, Carson C et al: Interleukin 2 gene therapy of colorectal carcinoma with autologous irradiated tumor cells and genetically engineered fibroblasts: A phase I study, Clin Cancer Res 5:2359–65, 1999.

Suminami Y, Elder EM, Lotze MT, Whiteside TL: In situ interleukin-4 gene expression in cancer patients treated with genetically modified tumor vaccine, J Immunother Emphasis Tumor Immunol 17:238–48, 1995.

Schmidt-Wolf IG, Finke S, Trojaneck B et al: Phase I clinical study applying autologous immunological effector cells transfected with the interleukin-2 gene in patients with metastatic renal cancer, colorectal cancer and lymphoma, Br J Cancer 81:1009–16, 1999.

Rochlitz CF, Jantscheff P, Bongartz G et al: Gene therapy with cytokine-transfected xenogeneic cells in metastatic tumors, Adv Exp Med Biol 451:531–7, 1998.

Galanis E, Hersh EM, Stopeck AT et al: Immunotherapy of advanced malignancy by direct gene transfer of an interleukin-2 DNA/DMRIE/DOPE lipid complex: Phase I/II experience, J Clin Oncol 17:3313–23, 1999.

Geutskens SB, van der Eb MM, Plomp AC et al: Recombinant adenoviral vectors have adjuvant activity and stimulate T cell responses against tumor cells, Gene Ther 7:1410–6, 2000.

Human protein reference data base, Johns Hopkins University and the Institute of Bioinformatics, at http://www.hprd.org/protein.

25.4. Activation of Tumor-Suppressing Pro-Drugs

Link Jr CJ, Levy JP, McCann LZ, Moorman DW: Gene therapy for colon cancer with the herpes simplex thymidine kinase gene, J Surg Oncol 64:289–94, 1997.

Sung MW, Yeh HC, Thung SN et al: Intratumoral adenovirus-mediated suicide gene transfer for hepatic metastases from colorectal adenocarcinoma: Results of a phase I clinical trial, Mol Ther 4:182–91, 2001.

Boucher PD, Im MM, Freytag SO, Shewach DS: A novel mechanism of synergistic cytotoxicity with 5-fluorocytosine and ganciclovir in double suicide gene therapy, Cancer Res 66(6):3230–7, 2006.

Kuriyama S, Kikukawa M, Masui K et al: Cytosine deaminase/5-fluorocytosine gene therapy can induce efficient anti-tumor effects and protective immunity in immunocompetent mice but not in athymic nude, Int J Cancer 81:592–7, 1999.

1038 REGENERATIVE ENGINEERING FOR CANCER

Huber BE, Austin EA, Richards CA, Davis ST, Good SS: Metabolism of 5-fluorocytosine to 5- fluorouracil in human colorectal tumor cells transduced with the cytosine deaminase gene: Significant antitumor effects when only a small percentage of tumor cells express cytosine deaminase, Proc Natl Acad Sci USA 91:8302–6, 1994.

Crystal RG, Hirschowitz E, Lieberman M et al: Phase I study of direct administration of a replication deficient adenovirus vector containing the E. coli cytosine deaminase gene to metastatic colon carcinoma of the liver in association with the oral administration of the pro-drug 5- fluorocytosine, Hum Gene Ther 8:985–1001, 1997.

25.5. Application of Oncolytic Viruses

Chernajovsky Y, Layward L, Lemoine N: Fighting cancer with oncolytic viruses, Br Med J 332(7534):170–2, 2006.

Aghi M, Martuza RL: Oncolytic viral therapies—the clinical experience, Oncogene 24(52): 7802–16, 2005.

Working PK, Lin A, Borellini F: Meeting product development challenges in manufacturing clinical grade oncolytic adenoviruses, Oncogene 24(52):7792–801, 2005.

Mathis JM, Stoff-Khalili MA, Curiel DT: Oncolytic adenoviruses—selective retargeting to tumor cells, Oncogene 24(52):7775–91, 2005.

Ko D, Hawkins L, Yu DC: Development of transcriptionally regulated oncolytic adenoviruses, Oncogene 24(52):7763–74, 2005.

Shmulevitz M, Marcato P, Lee PW: Unshackling the links between reovirus oncolysis, Ras signaling, translational control and cancer, Oncogene 24(52):7720–8, 2005.

Barber GN: VSV-tumor selective replication and protein translation, Oncogene 24(52):7710–9, 2005.

Mohr I: To replicate or not to replicate: Achieving selective oncolytic virus replication in cancer cells through translational control, Oncogene 24(52):7697–709, 2005.

O’Shea CC: Viruses—seeking and destroying the tumor program, Oncogene 24(52):7640–55, 2005.

Chou J, Roizman B: The gamma 1(34.5) gene of herpes simplex virus 1 precludes neuroblastoma cells from triggering total shutoff of protein synthesis characteristic of programmed cell death in neuronal cells, Proc Natl Acad Sci USA 89:3266–70, 1992.

Mineta T, Rabkin SD, Yazaki T, Hunter WD, Martuza RL: Attenuated multi-mutated herpes simplex virus-1 for the treatment of malignant gliomas, Nat Med 1:938–43, 1995.

Walker JR, McGeagh KG, Sundaresan P, Jorgensen TJ, Rabkin SD et al: Local and systemic therapy of human prostate adenocarcinoma with the conditionally replicating herpes simplex virus vector G207, Hum Gene Ther 10:2237–43, 1999.

Delman KA, Bennett JJ, Zager JS et al: Effects of preexisting immunity on the response to herpes simplex-based oncolytic viral therapy, Hum Gene Ther 11:2465–72, 2000.

Wildner O, Blaese RM, Morris JC: Therapy of colon cancer with oncolytic adenovirus is enhanced by the addition of herpes simplex virus-thymidine kinase, Cancer Res 59:410–3, 1999.

Bischoff JR, Kirn DH, Williams A et al: An adenovirus mutant that replicates selectively in p53deficient human tumor cells, Science 274:373–6, 1996.

Rothmann T, Hengstermann A, Whitaker NJ, Scheffner M, zur Hausen H: Replication of ONYX015, a potential anticancer adenovirus, is independent of p53 status in tumor cells, J Virol 72:9470–8, 1998.

Ries SJ, Brandts CH, Chung AS et al: Loss of p14ARF in tumor cells facilitates replication of the adenovirus mutant dl1520 (ONYX-015), Nat Med 6:1128–33, 2000.

BIBLIOGRAPHY 1039

Reid T, Galanis E, Abbruzzese J et al: Intra-arterial administration of a replication-selective adenovirus (dl1520) in patients with colorectal carcinoma metastatic to the liver: A phase I trial, Gene Ther 8:1618–26, 2001.

Habib NA, Sarraf CE, Mitry RR et al: E1B-deleted adenovirus (dl1520) gene therapy for patients with primary and secondary liver tumors, Hum Gene Ther 12:219–26, 2001.

Khuri FR, Nemunaitis J, Ganly I et al: A controlled trial of intratumoral ONYX-015, a selectivelyreplicating adenovirus, in combination with cisplatin and 5-fluorouracil in patients with recurrent head and neck cancer, Nat Med 6:879–85, 2000.

Heise C, Hermiston T, Johnson L et al: An adenovirus E1A mutant that demonstrates potent and selective systemic anti-tumoral efficacy, Nat Med 6:1134–9, 2000.

25.6. Application of Antisense Oligodeoxynucleotides

Tortora G, Caputo R, Damiano V et al: A novel MDM2 anti-sense oligonucleotide has anti-tumor activity and potentiates cytotoxic drugs acting by different mechanisms in human colon cancer, Int J Cancer 88:804–9, 2000.

Berg RW, Werner M, Ferguson PJ et al: Tumor growth inhibition in vivo and G2/M cell cycle arrest induced by antisense oligodeoxynucleotide targeting thymidylate synthase, J Pharmacol Exp Ther 298:477–84, 2001.

Nishizuka I, Ichikawa Y, Ishikawa T et al: Matrilysin stimulates DNA synthesis of cultured vascular endothelial cells and induces angiogenesis in vivo, Cancer Lett 173:175–82, 2001.

Tamm I, Dorken B, Hartmann G: Antisense therapy in oncology: New hope for an old idea? Lancet 358:489–97, 2001.

25.7. Application of Combined Therapeutic Approaches

Carroll NM, Chase M, Chiocca EA, Tanabe KK: The effect of ganciclovir on herpes simplex virusmediated oncolysis, J Surg Res 69:413–7, 1997.

Rogulski KR, Wing MS, Paielli DL, Gilbert JD, Kim JH et al: Double suicide gene therapy augments the antitumor activity of a replication-competent lytic adenovirus through enhanced cytotoxicity and radiosensitization, Hum Gene Ther 11:67–76, 2000.

Andreansky S, He B, van Cott J et al: Treatment of intracranial gliomas in immunocompetent mice using herpes simplex viruses that express murine interleukins, Gene Ther 5:121–30, 1998.

Advani SJ, Sibley GS, Song PY et al: Enhancement of replication of genetically engineered herpes simplex viruses by ionizing radiation: A new paradigm for destruction of therapeutically intractable tumors, Gene Ther 5:160–5, 1998.

Shimada H, Shimizu T, Ochiai T, Liu TL, Sashiyama H et al: Preclinical study of adenoviral p53 gene therapy for esophageal cancer, Surg Today 31(7):597–604, 2001.

INDEX

Acetyl choline, 502 Acrosomal vesicle, 331 Actin α isoform, cardiac, 56

Actin α isoform, muscular, 55 Actin assembly, regulation, 59 Actin disassembly, regulation, 59 Actin β isoform, muscular, 55 Actin β isoform, nonmuscular, 55 Actin α isoform, skeletal, 56 Actin-biding proteins, 55

Actin capping protein, 60 Actin depolymerization, 55 Actin filaments, 874

Actin filament-capping proteins, 59 Actin filament-crosslinking proteins, 59 Actin filament-severing proteins, 59 Actin filaments, structure, 55

Actin γ isoform, nonmuscular, 55 Actin monomer-binding proteins, 57 Actin nucleation, 55

Actin nuclei, 55 Actin monomers, 55

Actin polymerization, 55 Actin-related protein-2, 60 Actin-related protein-3, 60 Actinin, 61

Action potential, 875

Action potential, depolarization, 876 Action potential, polarization, 876 Activating transcription factor 2, 164 Adam 12, 886, 888

Adenine (Ala, A), 6 Adenylate cyclase, 219 Adeno-carcinoma, 1027 Adenosine, 15

Adrenergic receptors, 219, 709 Adult stem cells, 385 Aggrecan, 115, 117

Agrin, 888

Airway anatomy, 737

Air ventilation to blood perfusion ratio, 739

Akt, 627 Alanine, 18 Aldosterone, 673 Alginates, 482 α-helix, 23 Alleles, 11

Alveolar epithelial cells, type I, 738 Alveolar epithelial cells, type II, 738 Alzheimer’s disease, 554

Amino acids, acidic, 20 Amino acids, basic, 19 Amino acids, charged, 19

Bioregenerative Engineering: Principles and Applications, by Shu Q. Liu Copyright © 2007 John Wiley & Sons, Inc.

1040

Amino acids, uncharged, 20 Amyloid β peptides, 555 Amyloid plaques, 556 Amnionic ectoderm, 341 Amnionic fluid, 341 Amnionic sac, 341 Androgen receptor, 234 Angioblasts, 363 Angiogenesis, 363, 630 Angiopoietin-1, 803 Angiotensin I/II, 673, 675

Angiotensin-converting enzyme (ACE), 675 Angiotensin II type 1 receptor, 675, 710 Angiotensinogen, 710

Antisense oligonucleotide-based therapy, 448 Aortic valve regurgitation, 638

Aortic valve stenosis, 638 Apaf-1, 309

Apoptosis, 304 Apoptosis, regulation, 304

Apoptosis, assessment methods, 307 Arginine (Arg, R), 18

Arterial reconstruction, 686, 693 Asthma, conventional treatment, 745 Asthma, experimental models, 744 Asthma, molecular therapy, 745 Asthma, pathogenesis, 741 Asparagine (Asn, N), 18

Aspartic acid (Asp, D), 18 Astrocytes, 353

Atherosclerosis, conventional treatment, 684 Atherosclerosis, experimental models, 682 Atherosclerosis, influence of blood flow, 679 Atherosclerosis, molecular therapy, 687 Atherosclerosis, pathogenesis, 674 Atherosclerosis, prevention, 683 Atherosclerosis, tissue engineering, 693 Atk, 225

ATP synthesis, 90

Atrial natriuretic peptide, 707 Atrium, left, 585

Atrium, right, 585 Autocrine cell signaling, 149 Autonomic nerves, 511 Autophagy, 89

Autosomal dominant gene defects, 423 Autosomal recessive gene defects, 424 Axoneme, 331

B7.1, 1031

Basal cell carcinoma, 1017

Basement membrane, 108

INDEX 1041

Basophil precursor cells, 366

Bcl-2, 627

β-catenin, 230

β-cells, pancreas, 820, 827

β-galactosidase gene, 429, 445 β-glycan, 115, 118

β-sheet of protein, 23

Bid, 309 Biglycan, 118

Bioactive ceramics, 489 Biodegradable ceramics, 489 Bioinert ceramics, 489 Bioregenerative engineering, xxx Blastocyst, 340

Blk, 181

Blood cell development, 364 Blood flow, 671

Blood pressure, 671

Blood pressure regulation, baroreceptor, 672 Blood pressure regulation, chemoreceptor,

672

B-lymphocyte progenitor cells, 365

BMP2 (Bone morphogenetic protein 2), 352 BMP4 (Bone morphogenetic protein 4), 352 BMP6 (Bone morphogenetic protein 6), 352 Bone anatomy, 907

Bone cancer, 930 Bone, compact, 907 Bone formation, 909 Bone injury, 939

Bone injury, cell regenerative engineering, 942

Bone injury, conventional treatment, 940 Bone injury, molecular therapy, 940 Bone injury, tissue engineering, 942 Bone marrow, 908

Bone marrow stem cells, 388

Bone morphogenetic protein 2 (BMP2), 352 Bone morphogenetic protein 4 (BMP4), 352 Bone morphogenetic protein 6 (BMP6), 352 Bone, periosteum, 907

Bone regenerative engineering, 923 Bone resorption, 909

Brain-derived neurotrophic factors, 521, 984 Brain injury, 514

Brainstem, 505

BrdU (5′-bromodeoxyuridine), 269 5′-bromodeoxyuridine (BrdU), 269 Bronchodilators, 748

Cadherins, 292

Calcitonin, 921

1042 INDEX

Calcium-dependent protein kinase (PKC), 183, 185, 189

Calpastatin, 888

cAMP-dependent protein kinase (PKA), 183, 185, 187

cAMP response element-binding protein (CREB), 162

Cancer, classification, 1026

Cancer, conventional treatment, 1029 Cancer, molecular therapy, 1029 Cancer, pathogenesis, 1027 Carcinoembryonic antigen, 1031 Carcinoma, 1027

Cardiac cycle, 587 Cardiac formation, 361

Cardiac infarction, antioxidant molecules, 625 Cardiac infarction, cell regenerative

engineering, 630

Cardiac infarction, conventional treatment, 599 Cardiac infarction, growth factors, 600 Cardiac infarction, molecular therapy, 600 Cardiac infarction, pathogenesis, 598

Cardiac injury, prevention, 624 Cardiogenic mesodermal clusters, 361

Cardiomyopathy, conventional treatment, 595 Cardiomyopathy, experimental models, 595 Cardiomyopathy, molecular therapy, 595 Cardiomyopathy, pathogenesis, 594 Cardiomyopathy, tissue regenerative

engineering, 596 Cartilage anatomy, 917

Cartilage injury, cell regenerative engineering, 942

Cartilage injury, conventional treatment, 940 Cartilage injury, molecular therapy, 940 Cartilage injury, tissue engineering, 942 Caspase 3, 309

Caspase 8, 309

Caspase 9, 309

Cataract, conventional treatment, 983 Cataract, molecular therapy, 983 Cataract, pathogenesis, 983

CAT gene, 446 CD9, 338 CD28, 970 CD80, 969 CD86, 969 CD152, 969 Cdc42, 62, 303

Cell adhesion, 274

Cell adhesion molecules, immunoglobulin-like domain-containing, 274

Cell differentiation, 257 Cell division, 257

Cell division, anaphase, 260 Cell division, control, 260, 263 Cell division, G0 phase, 261 Cell division, G1 phase, 258 Cell division, G2 phase, 258

Cell division, G2 phase checkpoints, 261 Cell division, inhibition, 265

Cell division, M phase, 258

Cell division, M phase checkpoints, 261 Cell division, prometaphase, 258

Cell division, metaphase, 258

Cell division, restriction points, 261 Cell division, telophase, 260

Cell division, S phase, 258

Cell division, S phase checkpoints, 261 Cell division cycle (CDC) 2, 266

Cell division cycle (CDC) 25, 264 Cell transplantation, 460

Cell proliferation, 257

Cell membrane, lipid bilayer, 53 Cell membrane protrusion, 270 Cell migration, 270

Cell migration, regulation, 273 Cell polarity, 80

Cell regenerative engineering, xxxi, 456 Cell signaling, autocrine, 149

Cell signaling, endocrine, 149 Cell signaling, paracrine, 149 Cell signaling, long-range, 149 Cell signaling, short range, 149 Cell signaling, synapse, 149 Cell traction, 271

Cellulose, 481

Centrioles, 79

Centromere, 10

Centrosome, 79

Cerebellum, 504 Cerebral circulation, 506 Cerebral ventricles, 507 Cerebrum, 503

Cerebellum formation, 354 Cerebrum formation, 354 Cortisol, 232

c-Fos, 155, 161 Chemoreceptors, 510 Chemotherapy, 1029 Chitin, 483 Chitosan, 483 Choline, 26 Cholesterol, 28

Chondroblasts, 918

Chondrocytes, 918 Chondroitin sulfate, 114, 115 Chorion, 342

Chromatin, 10

Chromosomal cross over, 268 Chromosomal defects, 423 Chromosome organization, 9 Chylomicron, 28

Ciliary neurotrophic factor, 526, 984 Cirrhosis, conventional treatment, 787 Cirrhosis, molecular therapy, 787 Cirrhosis, pathogenesis, 785 Cis-acting elements, 37

c-Jun, 159 Cleavage, 340 Co-Cr alloys, 487 Cofilin, 58 Colcemid, 78 Colchicine, 78

Collagen matrix, 479 Collagen type Iα1, 104, 920 Collagen type Iα2, 104, 920 Collagen type II, 104 Collagen type III, 104 Collagen type IVα1, 104 Collagen type IVα2, 104 Collagen type Vα1, 104 Collagen type Vα2, 104 Collagen type VI, 105 Collagen type VII, 105 Collagen type VIII, 105 Collagen type IX, 105 Collagen type X, 105 Collagen type XI, 105 Collagen type XII, 105 Collagen type XIII, 105 Collagen type XIV, 106 Collagen type XV, 106 Collagen type XVI, 106 Collagen type XVII, 106 Collagen type XVIII, 106, 854 Collagen type XIX, 106 Colony-stimulating factor, 631 Cornea, 965

Corneal injury, 967

Corneal injury, conventional treatment, 968 Corneal injury, molecular therapy, 968 Corneal injury, reconstruction, 973, 977 Corneal injury, regenerative engineering,

971

Corpus striatum, 503

INDEX 1043

Cranial nerves, 506 Cranial nerve injury, 515

CREB (cAMP response element-binding protein), 162

Crk, 156 Cyclin A, 266 Cyclin B, 266

Cyclin D, 262, 264

Cyclin E, 262, 264 Cyclin G1, 971

Cyclin-dependent kinase 2 (CDK2), 262, 264 Cyclin-dependent kinase 4 (CDK4), 262, 264 Cyclin-dependent kinase 6 (CDK6), 262, 264 Cysteine (Cys, C), 18

Cystic fibrosis, conventional treatment, 752 Cystic fibrosis, experimental models, 750 Cystic fibrosis, molecular therapy, 753 Cystic fibrosis, pathogenesis, 750 Cytidine, 15

Cytochrome C, 309 Cytokines, 207, 629, 745 Cytokenesis, 260 Cytosine mutation, 421 Cytoskeleton, 55 Cytosine, 6

Cytosine methylation, 42 Cytotrophoblast, 342

Decorin, 115, 117

Deoxyadenosine, 6

Deoxycytidine, 6 Deoxyguanosine, 6 Deoxyribose, 6

Deoxyribonucleic acids (DNA), 5 Deoxythymidine, 6

Dermal stem cells, 387 Dermatan sulfate, 114 Dermis, 1008

Desmin filaments, 84

Desmocollin, 293, 295

Desmoglein 1, 293, 295 Desmoglein 2, 295 Desmosine, 111 Desmosomes, 84, 295 D-galactose, 114 D-glucuronic acid, 114 Diacylglycerol, 223

Diabetes, conventional treatment, 825 Diabetes, experimental models, 825 Diabetes mellitus, pathogenesis, 822 Diabetes, molecular therapy, 825 Diabetes, primary, 822

1044 INDEX

Diabetes, secondary, 822 Diabetes type I, 823 Diabetes type II, 823 Diencephalon, 353, 504

Digestive tract development, 366 DNA analysis, 433

DNA engineering, 421 DNA extraction, 428 DNA digestion, 428 DNA fragmentation, 309 DNA library, 430

DNA methylation, 42 DNA methyltransferase, 42 DNA modification, 42 DNA proofreading, 14 DNA recombination, 429

DNA replication, initiation, 12 DNA replication, extension, 13 DNA sequencing, 433

DNA strands, 9

Double-stranded RNA (dsRNA), 46 dsRNA (double-stranded RNA), 46 Dynein, 80

Dynein cytoplasmic heavy chain, 82 Dynein cytoplasmic intermediate chain, 82 Dynein cytoplasmic light chain, 82 Dystroglycan, 879

Dystrophin, 879

Early growth response 1 (Egr-1), 162 E-cadherin, 293

E. coli, 430 Ectoderm, 343

EGF (Epidermal growth factor), 152 EGFR (Epidermal growth factor receptor),

152 Egg, 333

Egr-1 (Early growth response 1), 162 Elastic fibers, 109, 480

Elastic laminae, 109, 480 Elk-1, 162

Embryonic circulation, 362 Embryonic development, 329 Embryonic epiblast, 341 Embryonic stem cells, 381 Endocardial cushion, 361 Endocardial primordia, 361 Endocrine cell signaling, 149 Endocytosis, 89

Endoderm, 343

Endoderm development, 366 Endoplasmic reticulum (ER), 87

Endosomes, 89 Endothelial cells, 661 Endothelial function, 661 Endothelin, 666 Endothelin receptor, 666

Eosinophil precursor cells, 366 Epidermal growth factor (EGF), 604 Epidermal stem cells, 386 Epinephrine, 188

Epiblast, 341, 381 Epidermal development, 347

Epidermal growth factor (EGF), 152 Epidermal growth factor receptor (EGFR),

153 Epidermis, 1008

ER (endoplasmic reticulum), 87 ER, rough, 87

ER, smooth, 87

ERK1/2 (Extracellular signal-regulated protein kinase 1/2), 155

ERKK (Extracellular signal-regulated protein kinase kinase), 159

Erythroblasts, 365

Erythrocytes, 365

Erythroid precursor cells (CFU-E), 365 Erythropoietin, 631

E-selectin, 289

Estrogen, 232

Estrogen receptor, 233, 921 Euchromatin, 10 Excitation-contraction coupling, 877 Exons, 8, 17

Exteroreceptors, 509 Extracellular matrix, 103, 670

Extracellular signal-regulated protein kinase 1/2 (ERK1/2), 155, 161

Extracellular signal-regulated protein kinase kinase (ERKK), 159

Extraembryonic endoderm, 341 Eyes, choroid, 965

Eyes, ciliary processes, 965 Eyes, nervous tunica, 966 Eyes, sclera, 965

Eyes, vascular tunica, 965

FADD (Fas-associated protein with death domain), 308

FAK (Focal adhesion kinase), 183 Fas-associated protein with death domain

(FADD), 308 Fas ligand, 308 Fas receptor, 308

Fertilization, 329 Fetal stem cells, 383

FGF (Fibroblast growth factor), 152

FGFR (Fibroblast growth factor receptor), 153 Fgr, 181

Fibrillin 1, 110

Fibrillin 2, 110

Fibrillin 3, 110

Fibrinogen, 665

Fibroblast growth factor (FGF), 152, 601 Fibroblast growth factor receptor (FGFR), 153,

603 Fibronectin, 107 Filamin A, 61 Filamin B, 61 Fimbrin, 61 Flagellum, 331

Focal adhesion kinase (FAK), 183, 303 Formin, 58

Fragmin, 59 Fyn, 181

GAGs, (glycosaminoglycans), 113 Ganciclovir, 690

GAP (GTPase-activating protein), 157 Gas exchange, 739, 740 Gastrointestinal anatomy, 799 Gastrointestinal cancer, 805

Gastrointestinal regenerative engineering, 806

Gastrointestinal reconstruction, 807 Gastrointestinal transplantation, 806 Gas ventilation, 739, 740 Gastrulation, 341

Gelsolin, 59

Gene amplification, 432 Gene cloning vectors, 429

Gene expression, regulation, 37 Gene knock out, 435

Gene locus, 11

Gene microarray analysis, 426 Gene mutation, 421

Gene sequencing, 433 Gene therapy, 436

Gene transcription, regulation, 38 Gene transfer, 436

Gene transfer, adenovirus-mediated, 440 Gene transfer, adeno-associated virus-

mediated, 440

Gene transfer, calcium phosphate-mediated, 443

Gene transfer, electroporation-mediated, 444

INDEX 1045

Gene transfer, embryonic, 437

Gene transfer, gene gun-mediated, 444

Gene transfer, herpes simplex virus-mediated, 442

Gene transfer, liposome-mediated, 443 Gene transfer, receptor-mediated, 442 Gene transfer, retrovirus-mediated, 439 Gene transfer, somatic, 438

Gene transfer, virus-mediated, 438 Genotypes, 8

GFP gene, 446

Glaucoma, conventional treatment, 980 Glaucoma, molecular therapy, 980 Glaucoma, pathogenesis, 979

Glial cell line-derived neurotrophic factor, 526, 854, 984

Glial filaments, 84

Glomerulonephritis, acute, pathogenesis, 859 Glomerulonephritis, acute, treatment, 859 Glomerulonephritis, chronic, pathogenesis, 860 Glomerulonephritis, chronic, treatment, 861 Glucagon, 776, 821

Glucocorticoid receptor, 233, 748 Glucokinase, 826 Glucose-6-phosphatase, 828 Glutamic acid (Glu, E), 18 Glutathione peroxidase (GPX), 626 Glutathione peroxidase 1, 628 Glutathione peroxidase 2, 628 Glutathione peroxidase 3, 628 Glutathione peroxidase 4, 628 Glutathione peroxidase 5, 628 Glutathione peroxidase 6, 628 Glutamine (Gln, Q), 18

Glycerol, 26 Glycine (Gly, G), 18

Glycogen synthase kinase 3, 561 Glycolipids, 27

Glycosaminoglycans (GAGs), 113, 114, 486

Glycosylation, 88 Glypican, 298

G-proteins (guanine nucleotide binding proteins), 218, 220

Golgi apparatus, 88 Golgi, cis-cisterna, 88 Golgi, medial cisterna, 88 Golgi, trans-cisterna, 88 Golgi network, cis-, 88 Golgi network, trans-, 88

Granulocyte-macrophage colony-stimulating factor, 1016