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Chapter  • Drug Research: Yesterday, Today, and Tomorrow
1
The direct path to medicines is an old dream of mankind. Even the alchemists searched for the elixir, the Arcanum, that would cure all diseases. It has still not been found. On the contrary, drug therapy has become even more complicated as our knowledge of the various causes of disease has become more complex.
Nevertheless, the success of drug research has been impressive. For hundreds of years, alcohol, opium, and solanaceous alkaloids (from thorn apples) were the only drugs used to prepare for surgery. Today, general anesthe­sia, neuroleptanalgesia, and local anesthetics make surgi­cal and dental procedures completely painless. Until this century, plagues and infectious diseases killed more peo­ple than all the wars. Today, thanks to hygiene, vaccines, chemotherapeutics, and antibiotics, these diseases have been suppressed, at least in industrialized countries. The dangerously increasing number of therapy-resistant bac­terial and viral pathogens (e.g., tuberculosis) has created new problems and makes the development of new drugs urgently necessary. H2-receptor antagonists and proton pump inhibitors have dramatically reduced the number of surgical procedures for the treatment of gastric and duodenal ulcers. Combinations of these inhibitors with antibiotics have brought even more progress by allowing causal therapy (Sect.3.5). Cardiovascular diseases, diabe- tes, and psychiatric diseases (diseases of the central ner­vous system, CNS) are mostly treated symptomatically, that is, the cause of the disease is not addressed, but rather the negative effects of the disease on the organism. Treat­ment is often limited to slowing the progression of the dis­ease or improving quality of life. Synthetic corticosteroids have led to signicant pain reduction and retardation of pathologic bone degeneration associated with chronic in­ammatory diseases (e.g., rheumatoid and chronic polyar­thritis). The spectrum of cancer therapy ranges from cure, especially in combination with surgery and radiotherapy, to complete failure of all therapeutic measures.
Highlights such as inhibitors of BCR-ABL kinase for ahereditary form of blood cancer are unfortunately still the exception (Sect.26.4). Recent developments that stimulate the body’s own immune system to ght cancer are promising (Sect.31.7).
In the case of bacterial infectious diseases such as tu­berculosis or viral diseases, the threatening increase in the number of therapy-resistant pathogens is constantly cre­ating new problems. Strongly modied viral variants can suddenly become amassive threat. At the turn of the year 2019/2020, the world had to learn this the hard way. We witnessed how the new highly contagious SARS-CoV-2 virus spread across the globe in the blink of an eye. Most likely, the virus was transmitted to humans from apet market in Wuhan, China, with bats and other animals as intermediate hosts. But rumors that the outbreak was caused by an accident or carelessness in ahigh-security virus research laboratory added to the already tense, of­ten politically motivated speculations. From continent to
continent, health systems were stretched to the limit and sometimes hopelessly overwhelmed. Mankind experi­enced in all its severity what the exponential spread of avi­rus really means. Rapidly increasing numbers of victims were terried country after country. Social and economic life came to astandstill for weeks. Both acute medicine and any kind of antiviral therapy seemed overwhelmed. Nothing but the robustness of one’s own immune sys­tem had the power to counteract the virus. What sounds like ahorror scenario in an apocalyptic novel suddenly became reality. The World Health Organization (WHO) reports that by 2024, 777million people worldwide had been infected with the virus and 7.1million had died from the infection. This bitter experience alone is apainful re­minder of the urgent need to develop new medicines and therapies. This is especially true if we want to maintain the quality of life that we have already achieved. The mu­tability of some viruses and the fact that they can easily jump between animals and humans should be warning enough. It seems almost miraculous that apandemic like the one in 2020 has not happened before. Perhaps the Spanish u of ahundred years ago was similar, with ahighly pathogenic inuenza virus. This makes it all the more likely that the pandemic we have now experienced will not remain asingular event. As if by miracle, two companies managed to develop highly effective mRNA vaccines within just one year (Sect.32.4), which are now offering protection to mankind. In the eld of protease inhibitors, too, atherapeutic agent was made available in record time (Sect.23.9). In the face of adversity, mankind seems to be able to lower bureaucratic hurdles, at least for ashort time. We are capable of extraordinary innovation and results-oriented decision-making. In retrospect, this was only possible because the scientic community had years of experience in drug discovery. It would be desir­able if this spirit from the pandemic era could be carried over into future research to combat cancer and neglected infectious diseases.
The history of drug discovery can be divided into sev-
eral sequential phases:
The beginning, when empirical methods were the only
-
source of new medicines,
Targeted isolation of active compounds from plants,
-
The beginning of asystematic search for new syn-
-
thetic materials with biological effects and the intro­duction of animal models as surrogates for patients,
The use of molecular and other in vitro test systems
-
as precise models and as areplacement for animal experiments,
The introduction of experimental and theoretical
-
methods such as protein crystallography, molecular modeling, and quantitative structure–activity rela­tionships for the targeted structure-based and com­puter-aided design of drugs, and
The discoveries of new targets and the validation of
-
their therapeutic value through genomic, transcrip-
. • It All Began with Traditional Medicines
tomic, and proteomic analysis, knock-in and knock-
out animal models, and gene silencing with siRNA.
Each preceding phase loses its importance as the next phase arrives. Interestingly, in modern drug discovery, the phases run in the opposite direction. First, atarget structure is discovered in the sequenced genome of an organism and its function is modulated to validate this target as acandidate for drug therapy. This is followed by structure-based and computational design of acom­pound in close collaboration with multiple in vitro assays to elucidate the activity and spectrum of activity. The next step is animal testing to establish clinical relevance, and nally clinical trials to conrm the suitability of atest substance as amedicine for patients.
1.1 It All Began with Traditional
Medicines
The beginnings of drug therapy can be found in tradi­tional medicine. The narcotic effect of poppy milk, the use of autumn crocus (Colchicum autumnale) for gout, and the diuretic effect of squill (Urginia maritime) for dropsy (now called congestive heart failure) have been known since ancient times. The dried herbs and extracts of these and other plants have been amajor source of medicine for more than 5000 years. The oldest written records of their use date back to 3000 BCE.
Around 1550 BCE, the ancient Egyptian Papyrus Ebers listed about 800 prescriptions, many of which in­cluded additional rituals to invoke the help of the gods. The ve-volume book De Materia Medica by Diosku­rides (Greek physician, rst century CE) is the most scientically rigorous work of antiquity. It contains de­scriptions of 800 medicinal plants, 100 animal products, and 90minerals. Its inuence extended into late Arabic medicine and early modern times.
The most famous medicine of antiquity was undoubt­edly theriac. Its predecessor, mithridatum, was used by the king of Pontus, MithridatesVI (120–63 BCE), as an antidote for poisonings of all kinds. Theriac can be traced back to Andromachus, the private physician of the Emperor Nero, and originally contained 64ingredients. This preparation was widely used until the eighteenth century. It was prepared in many variations with up to 100 ingredients. In some cities, it was even prepared un­der state control to ensure that no ingredient was left out! Its use became apanacea for all diseases. In addition, ev­ery imaginable wonder drug was used; some examples are rain worm oil, unicorn powder, stomach stones, human cranium powder, mummy dust, and many more.
Traditional Chinese medicine was already very ad­vanced in ancient times. Apeculiarity of its formulation was and is the circumstances responsible for the effect of four different qualities. The chief (jun) is the carrier of the effect, the adjutant (chen) supports the effect or induces another effect. The assistant (zuo) may also support the main effect or serve to ameliorate side effects, and one or
. Fig. 1.1 Many important natural products were isolated in the nine-
teenth century, and afew were synthesized. Morphine1.1 was isolated from opium by Friedrich Wilhelm Adam Sertürner in 1806, caffeine1.2 was isolated from coffee, and quinine1.3 was isolated from cinchona bark by Friedlieb Runge in 1819. Quinine was discovered independently by Pierre Joseph Pelletier and Joseph Bienaimé Caventou, who one year later isolated colchicine1.4 from autumn crocus. Cocaine1.5 was ex-
tracted from coca leaves by Albert Niemann in 1860, and ephedrine1.6 was extracted from the Chinese plant Ma Huang (Ephedra vulgaris) by Nagayoshi Nagai. In 1886, the rst alkaloid, coniine1.7, which is found in hemlock, was synthesized by Albert Ladenburg; in 1901 atropine1.8 was synthesized from deadly nightshade by Richard Willstätter. Reser­pine1.9 from Rauwola serpentina was rst prepared in the middle of the twentieth century, and its structure was elucidated
Chapter  • Drug Research: Yesterday, Today, and Tomorrow
1
more messengers (shi) moderate the desired effect. The Chinese Pen-Ts’ao school (rst and second century CE), whose goal was to live as long as possible without aging (!), recommended the following dosage regimen:
“When treating adisease with amedicine, if astrong ef-
»
fect is desired, one should begin with adose that is not larger than agrain of millet. If the disease is healed, no more medicine should be given. If the disease is not healed, the dose should be doubled. If that does not heal the disease, the dose should be increased tenfold. When the disease is healed, the therapy should always be dis­continued.”
The Chinese Materia Medica, published by Li Shizhen in 1590, consists of 52volumes. It contains nearly 1900 medical principles, plants, insects, animals, and miner­als, with 10,000 detailed recipes for their preparation. The Chinese Pharmacopeia of 1990 contains only two volumes. One of these volumes contains 784 traditional medicines, while the other contains 967 medicines from “Western” medicine.
Paracelsus (born Theophrastus Bombastus von Ho­henheim; 1493/1494–1541) made agreat breakthrough for scientic medical research. He understood the human body as a“chemical laboratory” and held the ingredients of medicines themselves, the Quinta Essentia, responsible for their healing effects. Nevertheless, until the beginning of the nineteenth century, all therapeutic principles were based on either plant, animal, or mineral extracts; only in the rarest cases were pure organic compounds used. This changed radically with the advent of organic chemistry. The great age of natural products from plants (for exam­ples see 1.1–1.9, . Fig.1.1) and the active substances derived from them had begun. Premature hopes placed in some of these substances at the turn of the last century, for example in heroin (Sect.3.3) or cocaine (Sect. 3.4), were very quickly dashed, but natural products from plants laid the foundation for our modern pharmacy and form an exceedingly large part of it. Natural products and their analogues and derivatives are also well repre­sented among today’s best-selling drugs.
1.2 Animal Experiments as aStarting
Point for Drug Research
The wealth of experience of traditional medicine is based on many thousands of years of sometimes accidental, sometimes intentional observations of their therapeu­tic effects on humans. Planned studies on animals were relatively rare. The biophysical experiment of Luigi Gal­vani, aprofessor of anatomy in Bologna, rst described in his book De viribus electricitatis in motu musculari in 1791, has become famous. As early as 1780, his students
had observed frog legs twitching when the nerve was dis­sected while astatic electricity generator was used. Such devices were standard equipment in many laboratories at the time. He wanted to show in standardized experiments whether the twitching was also caused by thunderstorms. He hung the legs on an iron window grill with acop­per hook—they twitched already when they touched the grill. The voltage difference between the two metals was enough to stimulate the nerve, even without an electrical discharge.
The systematic study of the biological effects of plant extracts, animal venoms, and synthetic substances on ani­mals began in the mid-1800s. In 1847, the rst department of pharmacology was established at the Imperial Univer­sity in Dorpat (today Tartu, Estonia). The famous phar­macologist Sir JamesW. Black, who developed the rst
β
-blocker (an antihypertensive drug, Sect.29.3) at ICI and later helped develop the rst H2 antagonists (see gastroin­testinal ulcer drugs, Sect.3.5) at Smith, Kline & French, compared pharmacological testing to aprism: what phar­macologists see in the properties of their substances de­pends directly on the model used to test the substances.
Like aprism, the models distort our vision in differ­ent ways. There is no such thing as adepressed rabbit or aschizophrenic rat. Even if such animals existed, they would not be able to share their subjective perceptions and emotions with us. Genetically modied animals (Sect.12.5), such as the Alzheimer mouse, are also ap­proximations of reality that have been distorted through adifferent prism, to use Black’s analogy. This reality is often underestimated in industrial practice. Scientists tend to optimize their experiments on aparticular, iso­lated model. In doing so, many factors and character­istics that are essential for adrug, such as selectivity or bioavailability, are not sufciently taken into account.
There is no way out of this dilemma. We need simple in vitro models (Sect.1.5) to test large series of poten- tially active compounds, and we need the animal models to correlate the data and make predictions about ther­apeutic effects in humans. Historically, therapeutic ad­vances have been made when anew in vivo or in vitro pharmacological model was available for anew effect (see H2-receptor antagonists, Sect.3.5).
Typical errors in the selection of models and in the interpretation and comparison of experimental results arise from different modes of application and the cor­relation of results obtained in different animal species. It does not make sense to optimize the therapeutic range of acompound in one species and the toxicology in an­other. Furthermore, comparing effects after axed dose without determining an effective dose also distorts the results because very potent and weak substances fall out­side the measurement range. Measuring the effect strictly according to aschedule is also questionable because it does not capture the latency period, the time before an
. • Biological Concepts in Drug Research
effect is seen, nor the time of maximum biological effect. Whole-animal models usually involve the use of auxil­iary medications, which can also inuence experimental results. Anesthetized animals often give completely dif­ferent results than conscious animals.

1.3 The Battle Against Infectious Disease

Plague and infectious diseases, most notably malaria and tuberculosis, have killed more people over time than all the wars in human history. Twenty-two million people died in the rst wave of the 1918 inuenza (“Spanish u”). Until the middle of the twentieth century, millions of people died each year from malaria, and unfortunately these numbers are rising again today (Sect.3.2). Until the turn of the century, ipecac (Psychotria ipecacuanha) and cinchona (Cinchona ofcinalisL.) were the only therapeu­tic approaches to this disease. The impressive successes in the ght against the plague are largely due to the last 80years of drug research. We owe this to the sulfonamides (Sect.2.3) and their combinations with dihydrofolate re­ductase inhibitors (Sect.27.2), the antibiotics (Sects.2.4,
6.4, and32.7), and the synthetic tuberculostatic drugs
(Sect.6.5). When SelmanA. Waksman (1888–1973) re­ceived the Nobel Prize for the discovery of streptomycin (Sect.6.4), alittle girl congratulated him with abouquet of owers. She was the rst patient with meningeal tuber­culosis to be healed with streptomycin. Today we cannot imagine the atmosphere of atuberculosis hospital from our own experience, but only from Thomas Mann’s The Magic Mountain (German: Zauberberg).
But infectious diseases, including tuberculosis, are on the rise. In the past, many antibiotics were overused. This, combined with the spread of resistant pathogens in hospitals, means that many cases can only be treated with very specic antibiotics. If resistance develops to these antibiotics, all our weapons will be blunt. New viral in­fections are on the horizon. Before the advent of acquired immune deciency syndrome (AIDS), there were very few cases of pneumonia caused by the fungus Pneumocystis jirovecii (formerly Pneumocystis carinii). This type of pneumonia is the main cause of death in AIDS patients and immunosuppressed patients after organ transplanta­tion. Great efforts have been made to nd drugs to treat AIDS and its complications (Sect.24.3). On the other hand, many widespread tropical diseases, such as malaria and Chagas disease, are still inadequately researched, and the spread of resistance to currently available drugs is agrowing global problem. Because these diseases are rampant in parts of the world where people lack the eco­nomic resources to afford chemotherapy, more and more pharmaceutical companies have withdrawn from these areas of research for economic reasons. The chances of recovering the development costs from the population
of the Third World are poor. This is where global pol­icy must provide some structure so that these people can benet from the technological advances of modern drug research. One example of this is the Bill and Melinda Gates Foundation, which is dedicated to the treatment and eradication of diseases throughout the world, with aparticular focus on developing countries. Improved hy­giene has also helped reduce the risk of infections such as traumatic fever and Shigella dysentery (discussed in Chap.21). Above all, vaccines have contributed to the eradication of many infectious diseases. Hopes are still pinned on new and combined vaccines for the prevention of AIDS, malaria, and gastrointestinal ulcers, the latter now known to be caused by the bacterium Helicobacter pylori (Sect.3.5). The Coronavirus pandemic in 2020 has made us once again aware of the importance of develop­ing avaccine in time to immunize the population.

1.4 Biological Concepts in Drug Research

Acetylcholine 1.10 (. Fig.1.2), synthesized by Adolf v.Bayer in 1869, is aneurotransmitter, that is, a trans­mitter of nerve impulses. In 1921, Otto Loewi, apharma­cologist, demonstrated its biological action in an elegant experiment. Two isolated frog hearts were perfused with the same solution. The vagal nerve of one of the hearts was stimulated, resulting in aslowing of the heart rate, known as bradycardia. Shortly thereafter, the second heart also began to beat more slowly, aclear indication of humoral signaling. Soon after, acetylcholine was iden­tied as the responsible “vagus substance.” Acetylcholine itself cannot be used therapeutically because it is metab­olized too quickly by acetylcholine esterases (Sect.23.7).
In 1901, Thomas Bell Aldrich (1861–1938) and Jok-
ichi Takamine isolated the rst human hormone, adren­aline (also called epinephrine) 1.11 (. Fig. 1.2). This hormone and its N-desmethyl derivative, noradrenaline (also called norepinephrine) 1.12, are produced in acen­tral location, the adrenal glands, and are released under stress conditions to the entire system except the CNS and placenta, which have their own barriers to most polar compounds. These substances cause different reactions in different parts of the organism, where they react with the corresponding receptors. The specicity is poor, and aplethora of pharmacodynamic effects result: pulse and blood pressure rise, and the organism is prepared for “ight”—which has been an extremely important func­tion throughout evolution.
Noradrenaline and adrenaline are neurotransmit-
ters (Sect.29.3), as are acetylcholine, biogenic amines
1.13–1.15, amino acids 1.16–1.19, and peptides such as
1.20 and 1.21 (. Fig.1.2). Neurotransmitters are pro-
duced locally in nerve cells, stored, and released upon nerve stimulation. After interacting with receptors on the
Chapter  • Drug Research: Yesterday, Today, and Tomorrow
1
. Fig. 1.2 The natural hormones und neurotransmitters acetylcho-
line 1.10, adrenaline 1.11, noradrenaline 1.12, dopamine 1.13, hista­mine 1.14, and serotonin 1.15, the excitatory amino acids glutamic acid 1.16 and aspartic acid 1.17, the inhibitory amino acid glycine 1.18 and γ-aminobutyric acid (GABA) 1.19, and several peptides, such as the enkephalins 1.20 and 1.21, substanceP and others serve as lead structures for drugs for avariety of cardiovascular and CNS diseases (see Chaps.3,29, and30)
neighboring nerve cell, they are rapidly metabolized or taken up again by the same neuron that released them. Depending on the name of the neurotransmitter, we speak of the adrenergic, cholinergic, and dopaminer gic (etc.) systems. The effect produced by adrenaline is called adrenergic, and an antagonist of this system is called anti adrenergic. However, this nomenclature is not always strictly observed. It is common to see combina­tions of the name of the neurotransmitter with the term agonist or antagonist, or sometimes blocker instead of antagonist, for example, adopamine agonist, ahistamine antagonist, or aβ-blocker for antagonists of β-adrenergic receptors (Sect.29.3). Aplethora of drugs have been de­rived from the structural variations of neurotransmitters.
At the end of the 1920s, the steroid hormones were isolated and their structures determined (Sect. 28.5). Overall, the discoveries of the mid-twentieth century heralded the “golden age” of drug discovery. The system­atic variation of the principles responsible for biological activity and our increasing knowledge of the mode of
action led to the synthesis of enzyme inhibitors, receptor agonists and antagonists, which, together with natural product derivatives from plants, make up the majority of our modern pharmacopeia.
1.5 In Vitro Models and Molecular Test
Systems
About 50years ago, we started thinking about testing compounds in simple in vitro models. These models in­volve biological testing in test tubes rather than on an­imals. There are many compelling reasons to avoid ani- mal testing. They are increasingly criticized by the public for many good reasons. They are also time consuming, costly, and difcult to standardize. Initially, cell culture models were preferred, such as tumor cell cultures for testing cytostatic therapies or embryonic chicken heart cells for testing cardiac agents. Later, receptor binding studies were added. The rst molecular test models were enzyme inhibitor assays, in which the inhibitory activity of amolecule on aspecic target protein could be eval­uated in the absence of disturbing side effects (Chap.7). Advances in gene technology (Chap.12) have not only simplied the preparation of the enzyme, but also al­lowed receptor binding studies to be performed on stan­dardized materials. It is now possible to accurately evalu­ate the full spectrum of activity of any compound on any enzyme, receptor of any type or subtype, ion channel, or transporter. This has become routine in academic and industrial drug discovery. Before biological screening be­gins, the following questions must be answered: What is the therapeutic target to be addressed and how can it be achieved? Therapeutic concepts are based on the patho­physiology and the causes of its alteration. Regulatory interventions with drugs are intended to restore normal physiological conditions as closely as possible. But there is aproblem. Nature works on two orthogonal principles: the specicity of the mode of action and an accentuated
-
spatial separation of effects; the compartmentalization. Adrenaline, produced in the adrenal glands, affects the entire body except the brain. When it is released there, it acts only at the synapse between two nerve cells. When it comes to specicity, chemists can beat Nature most of the time, but when it comes to spatial separation, they fail by awide margin.
Advances in gene technology (Chap.12) allow us to study compounds much more precisely than in the past, but the use of isolated enzymes and binding studies is far from the reality of animal models and even further from humans. In analogy to the difference between an animal experiment and an isolated organ experiment, awell-es­tablished correlation between the results obtained in cell culture and an in vitro assay and the desired therapeutic effect is aprerequisite for the successful use of the in vitro model. Quantitative activity-activity relationships
. • The Successful Therapy of Psychiatric Illness
between different biological effects (Chap. 19) provide the link between animal models and humans.
One modern researcher stands out in the eld of CNS drugs, but also in the elds of cardiovascular drugs and antihistamines. Paul Janssen (1926–2003) was the direc­tor of Janssen Pharmaceuticals in Beerse, Belgium. In the years following World WarII, his company discovered more than 70new compounds, took them through pre­clinical and clinical development, and established them as therapeutics. In the process, his company established itself as the most successful in pharmaceutical history. His recipe for success was no secret. Paul Janssen was amaster of structural variation, a“Beethoven of drug discovery.” The systematic combination of pharmaco­logically interesting structural building blocks and the elegant evaluation of receptor binding studies, in vitro models, and animal experiments were the basis of his success.
1.6 The Successful Therapy of Psychiatric
Illness
Until the middle of the last century, psychiatric hospi­tals were purely custodial institutions; they were almost indistinguishable from prisons in terms of restricting an individual’s personal freedom. The discovery of neuro­leptics, antidepressants, anticonvulsants, and sedatives revolutionized psychiatry. Typical examples of this class of drugs are shown in . Fig.1.3. With the repertoire of drugs available today, schizophrenia, chronic anxi­ety, and depression preponderate open-ward psychiatry. Many patients can be treated in an ambulatory setting.
In 1933, Manfred Sakel (1901–1957), who worked at the Psychiatric University Hospital in Vienna, noticed that individuals with schizophrenia who were given in­sulin to stimulate their appetite became calmer. Encour­aged by this result, he increased the dose to the point of hypoglycemic coma, aform of deep unconsciousness induced by low blood sugar. Insulin shock, pentetra­zole, and electroshock became standard treatment for psychotic illness for the next two decades, an impressive and frightening demonstration of the lack of therapeutic alternatives.
This situation changed in the 1950s with the discovery of reserpine1.9 (. Fig.1.1), an herbal natural product. This substance acts by depleting the reserves of the neu­rotransmitters noradrenaline, serotonin, and dopamine in nerve cells. Reserpine was the rst substance to show apronounced neuroleptic effect, that is, it is sedating and calming, and it was the rst compound used in psy­chotic disorders for which the biological effect could be explained by amode of action. Reserpine has also been used as an antihypertensive drug. Because of its very broad and unspecic action, it is rarely used today for psychiatric disorders or arterial hypertension.
. Fig. 1.3 A revolution in the therapy of psychiatric illness was
brought about by the discovery of potent neuroleptics such as chlor­promazine 1.22, tranquilizers such as diazepam 1.23, and antidepres­sants such as imipramine 1.24. For the rst time, these compounds allowed targeted treatment of schizophrenia, chronic anxiety, and depression. Examples of newer antidepressants with specic modes of action on transport systems (Sect.22.7) for noradrenaline and sero­tonin are desipramine 1.25 and uoxetine 1.26, respectively
The role of dopamine 1.13 (. Fig.1.2) in the etiol-
ogy of schizophrenia became clear with the discovery of chlorpromazine 1.22 (. Fig.1.3), asubstance that showed afavorable clinical effect. Unlike reserpine, which is nonspecic, chlorpromazine is apure dopamine antag­onist. The use of chlorpromazine and analogous tricyclic neuroleptics induced symptoms similar to those seen in Parkinson’s disease. This was the rst indication that an endogenous dopamine deciency was the cause of this disease.
Chlordiazepoxide (Librium®, Sect.2.7), the rst ben- zodiazepine tranquilizer, was discovered by chance. Only ayear after its introduction and for many years after that, the chemically closely related drug diazepam 1.23 (Valium®, . Fig.1.3) was the world’s best-selling drug. The Rolling Stones commemorated it in their multifac­eted song “Mother’s Little Helper.” Many companies embarked on elaborate synthetic programs, and chem­ists and pharmacologists applied their entire arsenal of methods. Success justied their efforts. Substances with different modes of action were created: more tranquil­izers, sedatives, hypnotics, and even antagonists. Even today, benzodiazepines (Sect.30.7) are among the most popular and widely used drugs.
The rst antidepressant, iproniazid (Sect.27.8), was also an accidental discovery. It works by inhibiting the metabolism of the biogenic amines dopamine, serotonin, noradrenaline, and adrenaline by inhibiting the enzyme monoamine oxidase (Sect.27.8). In addition to other
Chapter  • Drug Research: Yesterday, Today, and Tomorrow
1
severe side effects, the rst nonspecic representatives caused hypertensive crises and, when taken with certain foods, afew fatalities occurred. Tyramine, asubstance found in cheese, wine, and beer (hence the term “cheese effect”), was not properly metabolized. This caused alife-threatening increase in noradrenaline, ahormone that raises blood pressure.
The antidepressant imipramine 1.24 (. Fig.1.3) re-
sulted from the synthesis of analogues of chlorproma­zine. Interestingly, and despite its close structural rela­tionship, it is not aneuroleptic, but rather acts in the opposite way. It blocks the transporter for noradrenaline and serotonin (Sect.30.10), thus, preventing the re-up­take of these neurotransmitters from the synaptic gap. Desipramine 1.25 and uoxetine 1.26 are even more selective in that they inhibit only the noradrenaline or serotonin transporter of nerve cells.
1.7 Modeling and Computer-Aided
Design
To model the properties and reactions of molecules, and especially their intermolecular interactions, apowerful tool is available: the computer. In addition to solving com­plex numerical problems, it is the translation of the results into color graphics that perfectly matches the human abil- ity to comprehend images more quickly and easily than text or columns of numbers. This is not surprising. Our brains process text sequentially, but images are grasped in parallel. X-ray crystallography, electron microscopy, and multidimensional NMR spectroscopy (Chap.13) contrib­ute to our understanding of molecules, as do quantum mechanical and force eld calculations (Chap.15).
Is molecular modeling an invention of modern times? Yes and no. Friedrich August Kekulé (1829–1896) is said to have derived his cyclic structure for benzene from avi­sion of asnake circling around itself and biting its own tail (the snake, Uroborus, is an ancient alchemical sym­bol). The dream that became famous, however, may have come from the memory of the book Constitutionsformeln der Organischen Chemie by the Austrian schoolteacher Joseph Loschmidt (1821–1895; . Fig.1.4). The notation for the constitution of organic compounds introduced by Kekulé has become widely accepted and has greatly stimulated organic chemistry. However, Loschmidt would have been pleased to see images from molecular modeling that closely resemble his formulas. Today, we are increasingly focusing on the three-dimensional char­acter, steric requirements, and electronic properties of molecules. The rst structure-based design was performed on hemoglobin, the red blood pigment, in the research group of Peter Goodford (Sect.20.1). Hemoglobin’s af­nity for oxygen is modulated by so-called allosteric ef­fector molecules that bind to the core of the tetrameric
. Fig. 1.4 Loschmidt’s book Constitutionsformeln der Organischen
Chemie (1861) contains structures that anticipate both the formulation
of the benzene ring as well as the modern modeling structure. Kekulé must have known about this book because he disparaged it in aletter to Emil Erlenmeyer in January 1862 in that he referred to it as Con- fusionsformeln. Loschmidt did not become famous for his book, but rather because he carried out an experiment in 1865 that determined the number of molecules in amole to be 6.02 × 1023, aconstant that was later named after him
protein. From the three-dimensional structure, Goodford deduced simple dialdehydes and their bisulte addition products. These substances bind to hemoglobin in the predicted manner and shift the oxygen-binding curve in the expected direction.
The rst drug developed by using astructure-based approach is the antihypertensive agent captopril, an angiotensin-converting enzyme (ACE) inhibitor (Sect.25.4). Although the lead structure was asnake venom, the decisive breakthrough was made after mod­eling the binding site. For this, the binding site of car­boxypeptidase, another zinc protease, was used because its three-dimensional structure was known at the time.
The road to a new drug is difcult and tedious. Anested overview of the interplay between the different methods and disciplines from amodern point of view is illustrated in the scheme in . Fig.1.5. In the last few years, molecular modeling (Chap.15) and particularly the modeling of ligand–receptor interactions (Chap.4) have gained importance. Although modeling is employed predominantly for the targeted structure modication of lead compounds, it is also suitable for the structure-based and computer-aided design of drugs (Chap.20) and lead structure discovery (Sect.7.6). Examples of these ap­proaches are given in Chaps.21,23–32.
In addition to modeling and computer-aided design, structure–activity relationship analysis (Chap. 18) has contributed to the understanding of the correlation be­tween the chemical structure of compounds and their bi­ological effects. By using these methods, the inuence of lipophilic, electronic, and steric factors on the variation
. • The Results of Drug Research and the Drug Market

. Fig. 1.5 The way to a drug is long. The upper part of the gure
shows routes to lead structures. The middle part describes the design cycle, which in practically all cases must be repeatedly re-iterated. Each of these phases is described in detail in the following chapters. Iterative
of the biological activity, transport, and distribution of drugs in biological systems could be systematized for the rst time on statistically signicant foundations.
1.8 The Results of Drug Research
and the Drug Market
The development of different methods in drug research has already been described in the last section. . Table1.1 gives ashort historical overview of the most prominent results.
The assessment of a drug’s efcacy and safety has reached an extraordinarily high level today. In some ways, this has been abenet to our goal of nding new medicines, but it has also been an obstacle. Acetylsalicylic acid (Aspirin®) is undoubtedly avaluable drug. Today, this compound would have great difculty passing clin­ical trials. Acetylsalicylic acid is an irreversible enzyme inhibitor, it is relatively weakly effective, it causes gastric
optimization results in candidates for further development such as pre­clinical and toxicological studies. It is from these studies that the actual candidates are selected. Formulation, clinical trials, and registration then lead to anew medicine. The last phases are not presented in this book
bleeding at high doses, and it has avery short biological half-life. Each of these problems would be astrong ar­gument against its further development today. It would probably have failed in screening. In arisk–benet analy­sis, however, it is better than most alternatives. What is the problem? It probably lies in the analytical–deterministic mindset that dominates science and, therefore, also drug research. What is often overlooked is that such an ap­proach cannot always do justice to the complexity of the human system that we are dealing with in drug therapy.
Despite public healthcare systems that act as abar­rier between the supplier and the consumer, the pharma­ceutical market, with global sales of more than $1450 billion, is highly competitive. Two forces inuence this market: the state of science and technology and the needs of patients. Asmall number of drugs account for the majority of sales. Constantly changing “hit lists” of the best-selling drugs can be found on the internet. Due to mergers of established pharmaceutical companies over
Chapter  • Drug Research: Yesterday, Today, and Tomorrow
1
. Table 1.1 Important milestones in drug research
the last 30–40years, the market has shrunk to a small number of “BigPharma” companies. It is often the case that asingle drug can make or break acompany. Often just two or three drugs account for more than 50% of alarge company’s sales. Ahistorical example is Glaxo. It went from mideld to the top with ranitidine. Astra ex­perienced asimilar boom with omeprazole. Today, after the merger with Zeneca, it is one of the biggest players in the eld. Sankyo also had asingle drug, lovastatin, that boosted sales. With its drugs sildenal (Viagra®) and atorvastatin (Sortis®/Lipitor®), Pzer’s prots soared to unimaginable heights.
Over the past three decades, we have seen an increas­ing concentration of pharmaceutical companies, with the market becoming an oligopoly dominated by multina­tional corporations. Bear in mind that sales giants such as GlaxoSmithKline (GSK), Novartis, Sano, Bayer, Bris­tol-Myers-Squibb or AstraZeneca were created by merg­ers only about 20years ago. Companies such as Pzer and Roche have grown signicantly through acquisitions. The importance of research for pharmaceutical compa­nies is evident when one considers that typically 15–20% of turnover is invested in this area. It is unclear whether an equibilirium in the pharmaceutical market has been reached or whether the landscape will continue to change.
In the meantime, many small start-up biotech companies are shaking up the scene. Globalization is also playing its part. In addition, countries that have not yet reached the necessary level of development in their research are now entering the market. Political circumstances and risky dependencies, which are now viewed as problematic, will also contribute to arethinking of these developments.
1.9 A Subject of Conflict:
Pharmaceuticals
Drugs are at the center of public interest. While for de­cades only the doctor, sometimes in consultation with the pharmacist, prescribed the use of adrug, today’s pa­tients, alarmed by publications in the lay press, by pack­age inserts, or by more or less serious and well-researched information on the internet, want to take control of the administration of a drug or at least participate in the decision-making process. Inuencers are increasingly shaping opinion, and the use of articial intelligence may make it more and more difcult to distinguish between serious information and fake news.
An example illustrates the issues. Psychotropic drugs
have apowerful effect on personality and behavior. At
. • Synopsis

least since the introduction of Valium® (diazepam), these drugs have been in the media spotlight. They are invalu­able in the treatment of psychiatric disorders. On the other hand, the risk of abuse and addiction is particularly high. Some of these drugs are even used for self-medi­cation without strict adherence to indication guidelines. Fluoxetine 1.26 (Prozac®, . Fig.1.3) was introduced by Eli Lilly in 1988 and brought about aclear advance in the treatment of depression. There are now over ten popular science books with controversial content on this one drug alone. Peter Kramer’s book Listening to Prozac takes agenerally sympathetic tone, claiming that depressed pa­tients feel better and more “in harmony” with their per­sonalities after treatment with uoxetine. This book was on the New York Times bestseller list for over 21weeks. Peter Breggin’s book Talking Back to Prozac polemically criticized uoxetine, the company Eli Lilly, and the U.S. Food and Drug Administration (FDA). Side effects, risks, and especially the addictive potential were emphasized. Both books contain correct statements, but both may lead to the wrong conclusions. Prozac® is avaluable drug for the treatment of clinically manifest depression; however, for the treatment of mundane unhappiness or as ageneral stimulant, it is adrug with many risks.
To conduct arisk–benet analysis of adrug, it is im­portant to consider not only the desired effect, but also the severity of the disease and the objective and subjective side effects. In oncology, even severe side effects are of­ten tolerated for the possibility of improving the patient’s condition. If aterminal cancer patient is denied effective pain management because of the risk of addiction, this must be considered malpractice. On the other hand, many people are reckless with highly potent medications. Mis­use of antibiotics, faith in the almighty power of tran­quilizers and antidepressants, or chronic use of analgesics and laxatives can do more harm than good.

1.10 Synopsis

Drug research can be divided into several sequential
-
phases starting with empirical observations of the up-
take of natural products from food, the development
of in vitro test systems, increasing understanding of
structures and modes of action, to in vivo models and
gene technology.
It all started with traditional medicines. The rst pre-
-
scriptions date back to the ancient Egyptians and to
traditional Chinese medicine.
Paracelsus founded scientic medical research and
-
understood humans to be a“chemical laboratory.”
The ingredients of drugs were rst held responsible
for healing effects.
With the advent of organic chemistry, the rst thera-
-
peutic principles based on pure organic compounds
became available. The great age of natural products from plants and their active ingredients began.
Systematic studies on animals began in the 19th cen-
-
tury can be seen as astarting point for drug research. In vitro models are needed to test large series of po­tentially active compounds, but animal models are required to correlate the data and make predictions about the therapeutic effects in humans.
Our present life expectancy would not be possible
-
without the successful ght against infectious dis­eases. The broad application of antibiotics and the spread of resistant pathogens, however, have led to situations in which the best weapons against infec­tious diseases are becoming increasingly ineffective. Research against widespread tropical diseases has been neglected, and the currently increasing resis­tance to available medications represents aworldwide problem.
The elucidation of biological concepts, pathways,
-
and regulatory cycles by endogenous compounds has strongly stimulated drug research. Many developed drugs have arisen from structural variations of neu­rotransmitters, hormones, steroids, or natural sub­strates.
Systematic substance testing began with the estab-
-
lishment of in vitro models that replaced biologi­cal testing on animals by assays in test tubes. Gene technology has made it possible to prepare sufcient amounts of pure proteins for testing.
The discovery of neuroleptics, antidepressants, an-
-
ticonvulsives, and sedatives has revolutionized the treatment of psychiatric diseases.
Molecular modeling and computer-aided design along
-
with structural biology give access to rational con siderations on drug action. The rst structure-based design project was carried out on hemoglobin, and the rst drug developed by using astructure-based approach was the antihypertensive captopril.
The assessment of drug efcacy and safety has
-
reached an extraordinarily high standard today. The worldwide drug market, with more 1450 billion US dollars in sales per year, is large and highly compet­itive. Only afew drugs command alarge portion of sales and determine the particular dynamics in the market; the current tendency is corporate contraction to fewer and bigger companies. Often a single drug can make or break acompany.
Drugs remain in the focal point of public interest.
-
It is no longer the physician alone who inuences the prescription of medication; multiple sources of information have an impact and inform the patient. Aproper risk–benet analysis of amedication, taking into consideration not only the desired therapeutic effect but also the severity of an illness, is needed.
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