- •Sensing the microbial universe
- •The toll receptor in Drosophila
- •Lipopolysaccharides: shield and signal
- •Signalling through the TLR4 receptor
- •The TIRAP/MyD88 pathway
- •From TRAF6 to activation of IRF-3
- •The TRAM, TRIF pathway
- •The IRF family of transcription factors
- •Negative feedback control of the TLR4 pathway
- •Some consequences of TLR4-induced gene transcription
- •Essay: ubiquitylation and SUMOylation
- •Ubiquitylation
- •Ubiquitylation: a process involving three activities (but not necessarily three proteins)
- •63K or 48K conjugation
- •Two classes of E3-ubiquitin ligases
- •Ubiquitin-binding proteins
- •SUMO and sumoylation
- •Essay: the proteasome complex
- •The proteasome
- •20S particle
- •Proteasome activator (PA) subunits
- •List of abbreviations
- •References
The Toll-like Receptor 4 and Signalling through Ubiquitylation
FIG 15.1 Subcellular localization of the TLR pattern-recognition receptor family in dendritic cells.
TLR2, 4, 5, and 11 are cell surface receptors that recognize membrane components of invading microorganisms. TLR3, 7, 8, and 9 are present in the endosomal compartment, where they recognize different forms of nucleic acids taken up by the dendritic cell.6,17 TLR1 and TLR6, involved in the recognition of diacyl/triacyl lipopeptides and lipoteichoic acid, are not shown.
and, importantly, function independently of immunological memory. They recognize highly conserved components that are released by invading microbes, collectively named the pathogen-associated molecular patterns (PAMS).4 Among the PRRs are the Toll-like receptors that recognize essential components of microorganisms, such as membrane proteins, lipids, and nucleic acids5 (Figure 15.1 and Table 15.1). This chapter deals with the signalling pathway downstream of the Toll 4 (TLR4) receptor.
The toll receptor in Drosophila
Flies possess two strategies of defence against bacterial and fungal invasion:
(1)a cellular pathway involving plasmatocytes (the major blood cell type) and
(2)a humoral pathway that involves the production of bacteriolytic peptides (such as cecropins, diptericin, drosocin, and defensin), and antifungal peptides (drosomycin and metchnikowin).7
The events leading to the expression of the drosomycin gene were revealed by comparing signal transduction pathways in mammals and flies that have similar components but are instrumental in completely different processes.8,9 Thus, there are striking parallels between the pathway operated by the morphogen ‘dorsal’ in embryonic flies, controlled by the Toll receptor and the mediation of the inflammatory response in mammals by IL-1.10–12 Also, the promoter sequence of the diptericin gene has DNA motifs related to NF- B binding sites.
Toll. Lack-of-function mutants produce dorsalized Drosophila embryos, dominant gain- of-function alleles result in ventralized embryos. The German word toll means ‘amazing’, ‘fantastic’. According to Christiane Nüsslein-Volhard, ‘When Eric Wieschaus and I
first saw the mutant phenotype, we were amazed, because it was so novel and unexpected. I must have yelled “toll”, and the name stuck’.
Beyond its role in development, Toll plays a key role in the host defence mechanisms of adult flies. While
Drosophila Toll recognizes the cytokine spätzle, the mammalian TLRs (TLR1– 12) recognize specific microbial components, ranging from singlestranded DNA to lipopolysaccharides6 (see
Figure 15.4).
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Signal Transduction
Table 15.1 Ligands for Toll-like receptors
|
Ligand |
Source organisms |
TLR |
|
|
|
|
Viruses |
DNA |
|
9 |
|
|
|
|
|
dsRNA |
|
3 |
|
|
|
|
|
ssRNA |
|
7 & 8 |
|
|
|
|
|
envelope proteins |
RSV, MMTV |
4 |
|
|
|
|
|
haemagglutinin |
measles |
2 |
|
|
|
|
Bacteria |
lipopolysaccacharides |
gram-negative |
4 |
|
|
|
|
|
diacyl lipopeptides |
mycoplasma |
2 & 6 |
|
|
|
|
|
triacyl lipopeptides |
(myco)bacteria |
1 & 2 |
|
|
|
|
|
LTA |
streptococcus B |
2 & 6 |
|
|
|
|
|
peptidoglycan |
gram-positive |
2 |
|
|
|
|
|
porins |
Neisseria |
2 |
|
|
|
|
|
flagellin |
flagellated bacteria |
5 |
|
|
|
|
|
CpG-DNA |
(myco)bacteria |
9 |
|
|
|
|
Fungi |
zymosan |
S. cerevisiae |
2 & 6 |
|
|
|
|
|
phospholipomannan |
C. albicans |
2 |
|
|
|
|
|
mannan |
C. albicans |
4 |
|
|
|
|
|
glucuronoxylomannan |
Cryptococcus n. |
2 & 4 |
|
|
|
|
Protozoans |
tGPI-mutin |
Trypanosoma |
2 |
|
|
|
|
|
glycoinositol phopsholipids |
Trypanosoma |
4 |
|
|
|
|
|
hemozoin |
Plasmodium |
9 |
|
|
|
|
|
profilin-like molecule |
Toxoplasma gondii |
11 |
|
|
|
|
Host |
Hsp 60 |
|
4 |
|
|
|
|
|
Hsp 90 |
|
4 |
|
|
|
|
|
fibrinogen |
|
4 |
|
|
|
|
The idea that inflammatory responses may be conserved throughout species, and that the dorsal pathway may be replayed by adult flies to control expression of antimicrobial peptides, acted as a spur to investigate the role of the ‘dorsal/IL-1 ‘ pathway in the regulation of Drosophila host defence.7 This yielded dividends when it was found that expression of drosomycin occurs
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The Toll-like Receptor 4 and Signalling through Ubiquitylation
Table 15.2 Toll and IL-1 pathways in Drosophila and mammals
Function |
Drosophila |
Mammal |
|
|
|
Ligand |
Spätzle |
IL-1 |
|
|
|
Receptor (TIR domain) |
toll |
IL-1R |
|
|
|
Adaptor (TIR/death domain) |
tube |
MyD88 |
|
|
|
Serine/threonine protein |
Pelle |
IRAK-4 |
kinase (death domain) |
|
|
|
|
|
Inhibitory protein |
Cactus |
IkB |
|
|
|
Transcription factor |
Dorsal |
NF- B |
|
|
|
Gene expression |
drosomycin, metchinikowin, |
numerous, |
|
cecropin, attacin, defensin |
see Figures |
|
|
15.5 and 16.4 |
|
|
|
through the dorsal pathway. Ablation of the Toll receptors results in flies that are susceptible to microbial infection, particularly by fungi. The Toll–dorsal pathway is a costimulant for the expression of antimicrobial peptides.13
Spätzle and IL-1 are, respectively, the ligands of Toll and IL-1 receptors.14 Although these ligands have no sequence homology, spätzle being closer to the mammalian nerve growth factors (NGF), the processing of their inactive precursors is controlled, in part, by immune challenge. During development, spätzle is processed by three extracellular serine proteases (‘easter’, ‘gastrulation defective’, and ‘snake’). An alternative proteolytic cascade, activated by an immune challenge, may constitute the activation mechanism in host defence.15 IL-1 is processed by an intracellular protease (interleukin- 1 -converting enzyme, ICE, also called caspase-1). In monocytes the activity of this enzyme is controlled by, among other factors, lipopolysaccharides.16
Although the ligands are dissimilar, the receptors, Toll and IL-1R share a common intracellular protein–protein interacting TIR domain, through which they bind the adaptors TIRAP, TRIF, TRAM, and MyD88 (in mammalian cells) and MyD88 (in Drosophila)19,20 (see Table 15.2 and Figure 15.2). The extracellular domains are completely different. The adaptors Tube and MyD88 both contain a death domain (DD) and are involved in the activation of the serine/threonine kinases pelle and IRAK-4 respectively. The protein interaction domain DD is also present in the C-terminal region of the TNF receptor (TNFR-1) and involved in TNF-mediated signalling for apoptosis (see page 489). The DD mediates selfassociation of these receptors, so directing the signal to downstream events.
The downstream targets of these two pathways are Dorsal and NF- B, both of which contain a REL-homology domain (RHD) that binds DNA at the B sequence motif (Figure 15.3) (first discerned in the kappa light chain enhancer region of immunoglobulin24). Classical NF- B is a transcription
The TIR domain is the target of an escape strategy of vaccinia virus. It encodes two TIRdomain proteins which block receptor signalling by sequestering MyD88 and TRIF.21
Proteins carrying a death domain are not necessarily involved in the process of death signalling (apoptosis). Examples of death domain proteins are IRAK, pelle, tube, ankyrin (cytoskeleton), MyD88, RIP (apoptosis), and TRADD.
455
Signal Transduction
FIG 15.2 Comparison of domain the architectures of receptors, adaptors and effectors involved in signalling through the Toll and Toll-like receptors. Toll and TLR4 both have leucine-rich repeats in their extracellular segment (two of which, at the N-terminus, are highlighted in the inset panel) and an
intracellular TIR domain. A signalling complex is recruited to the occupied receptor through adaptors containing TIR domains. Those that possess only a TIR domain (such as TIRAP) recruit other TIR-containing adaptors. Adaptors having an additional death domain (DD) recruit the DD-containing serine/threonine kinase IRAK-4 (or pelle in the case of Toll). Note that the IL-1R also possesses a TIR domain and therefore resembles both Toll and TLR4, but in addition it has three Ig-like domains in the extracellular segment. The N-terminal is indicated at the left, unless otherwise indicated (1ziw,22 1fyw23).
FIG 15.3 Domain architecture of the NF- B/Rel and I B proteins.
The Toll and IL-1R pathways control transcription factors of the NK- B/Rel family which share a Rel-homology domain that determines nuclear localization, DNA binding, and subunit dimerization. Members of this family are held in check by inhibitors, members of the I B family, characterized by numerous ankyrin repeats. (Truncated versions, p50 and p52, possess only the Rel-homology domain.) I B proteins bind NF- B/Rel and prevent both recognition of their nuclear localization signal (NLS) and binding to DNA. Partial proteolysis of the ankyrin repeat relieves this constraint. Phosphorylation of these proteins signals their destruction and this allows activation of NF- B. Adapted from Beinke and Ley.25
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