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xxxiv List of Figures
Fig. 31.4 Schematic of a closed-loop brain stimulation system: A
participant or patient receives ongoing brain stimulation. Neuroimaging data (e.g., EEG) is concurrently recorded and fed to a control computer via remote data access, Lab Streaming Layer (LSL), or a similar protocol. The control computer performs a rapid analysis of brain activity, like curren t state, or power, frequency or phase of a brain rhythm. Based on the extracted features, the control computer either triggers the application of a predened waveform or updates a waveform and feeds it to the
attached stimulator via a digital-to-analog converter ............... 466
Fig. 31.5 Example of a tACS-artifact size in an EEG recoding. (a) A 110
seconds EEG recording during onset of tACS at 2 mA and 10 Hz, recorded from electrode Pz, with stimulation applied over Cz and Oz. The normal EEG signal is situated in the μV range, while the tACS-artifact reaches a peak-to-peak amplitude of 10mV. The gray regions depict 10 second windows for the FFT-spectra below. (b) Semi-logarithmic plot of a normal EEG spectrum with a visible alpha peak at 10.9 Hz. (c) Semi-logarithmic plot of an EEG containing tACS. Notice the peak at the stimulation frequency that is 3 orders of magnitude above any physiological
activity. Harmonics are visible at 20 and 30 Hz .................... 469
Fig. 31.6 Example of EEG signal drifting (naturally or by applied
stimulation into the limit of the ampliers A/D range). In the clipped region, all recorded samples have the same value. Any
physiological information is lost from this time period ... ... ... .. . 470
Fig. 31.7 Example of nonlinear component response in a stimulation + EEG
setup. The gray line shows the perfect digital square-wave, before passing through the digital/analog converter, the stimulation device, rubber electrodes, EEG electrodes, and the EEG amplier. The black line shows how this square was recorded in the EEG. Note the distortions at both rising and falling edges of the
square . ... ......................... ..................................... 470
List of Figures xxxv
Fig. 32.1 Panel A (left; modied from Ziemann et al., 2026 10.1016/j.
clinph.2025.2111487) shows a schematic representation of the main elements used to acquire TMS–EEG signals: a neuronavigated TMS coil, a TMS-compatible EEG amplier receiving signals from an EEG cap with TMS-compatible electrodes designed to reduce TMS-induced eddy currents, a Graphic User Interface to visualize TEPs in real time, and TMS-compatible ergonomic in-ear earphones playing noise masking generated by a specically devised tool Panel A (right;
modied from Ziemann et al., 2026 10.1016/j. clinph.2025.2111487) displays an example of TEPs recorded
from the posterior parietal cortex (modied from Rosanova et al.,
2009), shown for one channel (thick light-green trace) and across all channels as a buttery plot (dark-green shaded area). Positive (blue circles) and negative (red circles) peaks corresponding to TEP components are marked. Background colors indicate the prestimulus baseline (light blue), early components (light red), and late components (light yellow). A symbolic representation of oscillatory activity in four frequency bands (Fb1–Fb4, increasing in frequency) is shown as rectangles with alternating light and dark green shading. The inset illustrates immediate TEP components recorded over M1. Panel B (left to right; modied
from Ziemann et al., 2026 10.1016/j.clinph.2025.2111487)
illustrates:Excitability measuresexamples include the peak-to­peak amplitude and slope of the rst TEP component at the single­channel level. Similar measures can be derived from the Local Mean Field Power (LMFP) within the rst 50 ms, such as the Immediate Response Area (IRA) and Immediate Response Slope (IRS) (modied from Casarotto et al., 2013; 10.1007/s10548-012­0256-8). Cortical excitability can also be estimated at the source level using indices such as the Signicant Current Density (SCD; modied from Casali et al., 2010) Oscillatory activityschematic representation of methods used to extract evoked and induced TMS-related oscillations (time–frequency plots modied from Rosanova et al., 2009; pipeline modied from Harquel et al.,
2024)Causality and connectivityexamples of local causality measures (Phase Locking Factor, PLF) and connectivity indices computed at the sensor level (directed Weighted Phase Lag Index, dWPLI) and at the source level. (Signicant Current Scattering, SCS; modied from Casali et al., 2010) Perturbational Complexity Index (PCI)—schematic representation of the main
computational steps ................................................... 482
Fig. 33.1 A general
scheme of the main EEG-fMRI data integration approaches proposed in the literature, including purely
comparative, asymmetrical, and symmetrical techniques .......... 507
xxxvi List of Figures
Fig. 33.2 Schematic of EEG-informed fMRI. For an event of interest (e.g.,
the occurrence of a response error), a parameter value of an EEG feature (e.g., the amplitude of an ERP) is extracted from every trial that includes this event. With respect to fMRI, the onsets of these events during the course of the experiment are known, and the fMRI signal changes caused by hemodynamic responses following the events are mathematically modelled. This is done via convolution: the multiplication and summation of a vector of zeros and ones representing the event onsets and the hemodynamic response function (mathematically modelled fMRI signal changes following an event). The result is the predicted time course of fMRI signal changes which can then be statistically compared with the observed fMRI signal for each voxel (volume element) of a brain scan. In the case of EEG-informed fMRI, not only is this model determined by event onsets and the hemodynamic response function (blue model prediction), but the expected hemodynamic responses are additionally parameterised using the extracted EEG feature: signal changes following events on trials with a large EEG response are scaled up as compared with trials with smaller EEG responses (green model prediction). Although beyond the scope of this chapter, for this analysis knowledge of the hemodynamic response function is required and maybe less certain in some applications such as epilepsy or in
neonates . ............................................................... 508
Fig. 33.3 Illustr
ation of fMRI-informed EEG source reconstruction. To estimate the location and activity of active cortical patches in the brain that lead to measurable EEG signal changes on the scalp, forward or head models are constructed from individual MR images. Here, volumes representing skin, skull, and brain tissue have been extracted. Based on such a model and the EEG time courses as well as corresponding scalp topographies (the patt ern of EEG a ctivity as recorded on a participants head), EEG sources can be inferred (inverse modelling). Statistical maps from a standard fMRI analysis are used to further constrain possible source constellations. The procedure used here for inverse modelling computes a high number of dipolar sources distributed across the brain, each of which is characterised by its position, orientation (pointing direction of an arrow), and strength (as
indicated by colouring) . .............................................. 509
List of Figures xxxvii
Fig. 34.1 Recording of cardiac activity and heartbeat-evoked potentials
(HEPs). (a) Modied Einthovens triangle electrode placement with the resulting bipolar leads I-III for the recording of the ECG, and pulse oximeter nger clip for the recording of the PPG. (b) Schematic ECG waveform as recorded by lead II, with PQRST components marked. Each cardiac cycle can be divided into two phases, systole (green) and diastole (blue). We show the recommended ventricular denition, with phases lasting from R-peak to end of T and from end of T to next R-peak (Aufan et al., 2023; Caparco et al., 2025). (c) Schematic PPG waveform and main components. The systolic peak appears delayed compared to the ventricular depolarization marked by the ECGs R-peak due to the pulse arrival time. (d) Computation of the neural HEP: neural (e.g., EEG) recordings are epoched into short time-windows time­locked to an event within the ECG such as the R-peak (left). Right bottom: The average over epochs yields the HEP. Right top: Locations within the cortex in which HEPs have been reported (Engelen et al., 2023). Abbreviations: ECG electrocardiogram, PPG photoplethysmography, EEG electroencephalography, HEP
heartbeat-evoked potential ........................................... 536
Fig. 34.2 Princi
ples of respiration-brain coupling. (a) In studies of respiration-brain coupling, time-locked neural, respiratory, and behavioural signals can be recorded simultaneously. (b) Neural time series are oftentimes transformed into frequency space to investigate neural oscillations (top). Respiratory phase is extracted from the raw breathing signal (green and black lines in the middle panel, respectively). Both neural and behavioural measures can then be analysed according to the respiratory phase at which they occurred (bottom). (c) Green arrows show the feedforward initiation of respiratory dynamics originating in the preBötzinger complex of the brainstem. Red arrows illustrate the feedback connection by which the circulating airstream in the nasal cavity triggers mechanosensory neurons. This phase-phase coupling (top inset) is then propagated through higher-order brain areas so that the phase of respiration drives the amplitude of neural responses
throughout the cortex .............. ................................... 541
xxxviii List of Figures
Fig. 34.3 Gastric anatomy, signal characteristics, and EGG recording
approaches. (a) Schematic of the human stomach showing the location of the pacemaker region in the corpus, where interstitial cells of Cajal initiate the gastric rhythm that propagates towards the antrum and pylorus. ( b) Example of raw electrogastrography (EGG) recording (black trace) and extracted gastric rhythm (blue trace). The corresponding amplitude envelope (upper blue trace) and instantaneous phase (bottom panel) are derived using the Hilbert transform. (c) Power spectral density of EGG signals across electrodes. The dominant peak at ~0.05 Hz reects the gastric slow wave, within the normogastric range (0.033–0.066 Hz). (d) Electrode congurations used in EGG research, ranging from classic single bipolar montages (left), to multi-channel arrangements (middle), to high-density electrode arrays (right) for
mapping gastric activity with higher spatial resolution . .. .. .. .. .. . 545
Fig. 35.1 Timeline of a typical peer review process. Authors (upper
timeline) submit the manuscript (1). The editor (middle timeline) assesses the manuscript to determine suitability for the journal (2). The manuscript can be rejected at this stage or sent onward to reviewers (3). The reviewers (bottom timeline) evaluate the manuscript (4) and send their recommendations to the editor. Based on the recommendations, the editor can reject, accept (not shown), or return to the authors for revisions (thick line) (5). Authors revise the manuscript based on reviewer suggestions (6) and resubmit it (1*). The process of evaluation/review/revision is iterative and proceeds until the manuscript is either accepted or rejected. The accepted manuscript is sent for production and
publication ............................................................. 560
Fig. 36.1 Example plots for event-related time domain data. The left panel
(a) shows an ERP at three midline electrodes (Fpz, Cz, Pz). Two conditions of an oddball task are displayed as an overlay, targets as a solid line, and standards as a dashed line. The right panel (b) shows a selection of ve individual trials of the target condition at electrode Cz. The single trials are noisier and show more
variability ..................... ......................................... 578
Fig. 36.2 Exa
mples for topographies of EEG data based on the difference between two ERPs (targets minus standards) in an oddball experiment. The data is averaged within the time window 240–360 ms. The top panel (a) shows a 2D topography as a view from the top in which all scalp electrodes are projected on the same plane. The bottom panel (b) shows the same data projected onto a 3D head model from two different angles. Positive values
are represented by warmer colours .................................. 580
List of Figures xxxix
Fig. 36.3 Classical example plots for (time-)frequency domain analyses.
The left panel (a) shows a typical frequency spectrum during a resting task with closed eyes. The power in the alpha band (in green) is elevated at occipital electrodes (Oz is displayed). The right panel (b) shows a time-frequency representation based on wavelet analysis. The x-axis refers to time, the y-axis to frequency. The example shows ongoing activation in the alpha band that is suppressed when a stimulus is presented (at 0 ms).
Higher power values are represented by warmer colours ... ... ... . 581
Fig. 36.4 Example plots for connectivity results. The left panel (a) shows
connectivity values plotted onto a 2D scalp map. Each value is represented by a line between the respective electrode locations. Darker line colour represents higher connectivity. The right panel (b) shows the same data displayed as a connectivity matrix. Both x and y-axis represent the channels and the connectivity value for each channel pair is represented by colour, whereby yellow means
higher connectivity ... ... .............................................. 582
Fig. 36.5 Exa
mple plot from an EEG source analysis with the LORETA algorithm. Three slices from different directions of the MNI 305 standard template are shown with the source activation displayed
as overlay. Higher activation is shown in more intense red ....... 583

List of Tables

Table 1.1 Common multimodal EEG applications .......................... 9
Table 4.1 Cranial nerves ... ... .. . .. ... ... ... .. . .. ... ... ... ... ... .. ... ... ... ... . 43
Table 7.1 Example of trial-specic structured information from a
participant in a hypothetical visual perception task (see text) . . . 76
Table 8.1 Trial and block checklist ... ........................................ 98
Table 9.1 Illustrative example of a numerical table prepared for a within-
subject t-test to evaluate a statistical hypothesis about the mean difference in ERP magnitudes between two conditions (e.g., left,
right) at channel Pz at time + 200 ms ............................. 111
Table 11.1 Example of simple information that could be included in a lab
logbook . ... ... .. . .. ... ... ... .. . .. ... ... ... .. . .. ... ... ... .. ... ... ... .. 131
Table 12.1 Target impedance, estimated preparation time, and approxi mate
recording duration for commonly used combinations of
electrode type and conduction method . ........................... 144
Table 14.1 Three examples of how to divide and group 8 bits: One single
group of 8 bits to decode 0–255 values, two groups of 4 bits to decode values of 0 – 15 each, and a 7-bit group with a single bit to
decode 0–127 values and an on/off state .. . ....................... 169
Table 15.1 Eye artifacts and tips for reducing their occurrence ... ........... 180
Table 15.2 EMG artifacts and suggested solutions ............................ 183
Table 15.3 Other physiological artifacts and optional solutions ............. 186
Table 15.4 Cable and electrode artifacts with troubleshooting strategies . . . 188
Table 19.1 Examples of early sensory ERP components ..................... 247
Table 19.2 Examples of long-latency sensory ERP components ............ 248
Table 19.3 Examples of later cognitive ERP components ... .. . .. ... ... ... ... 250
xli
xlii List of Tables
Table 20.1 Common modeling approac hes to solve the forward problem of
the EEG .............................................................. 258
Table 20.2 Shows a non-exhaustive collection of popular inverse methods
from the RLS family ................................................ 262
Table 22.1 Recommended lter settings from Zhang et al. (2024b) for the 7
ERP components in the ERP CORE (in Hz, with a slope of 12 dB/octave), separately for each of four different scoring
methods ................ .............................................. 294
Table 26.1 Ictal onset patterns on scalp EEG .................................. 354
Table 35.1 Typ
ical sections of a scientic article ............................. 559

Editor and Contributors

About the Editor
Tracy Warbrick is Head of Education and Scientic Communication at Brain
Products GmbH (Gilching, Germany). She holds a PhD in Psychology and has a multidisciplinary background spanning psychology, sport and exercise science, neuroimaging, and research methods. She has published widely in the elds of cognitive neuroscience and neuroimaging and has extensive experience in experi­mental design, data acquisition, and analysis of EEG and fMRI data. She is also strongly committed to teaching and learning and holds a postgraduate qualication in further and higher education. In her current role, she leads the develo pment of high-quality educational resources for the EEG and neurophysiology research com­munity, working closely with researchers to foster collaboration between academia and industry.
Contributors
Aime J. Aguilar-Herrera Department of Electrical and Computer Engineering,
University of Houston, Houston, TX, USA
Paulo Rodrigo Bazán Brain Products GmbH, Gilching, Germany
Katherine Boere Department of Exercise Science, Physical and Health Education,
The
University of Victoria, Victoria, BC, Canada
David W. Carmichael School of Biomedical Engineering and Imaging Sciences,
s College London, London, UK
King
xliii
xliv Editor and Contributors
Silvia Casarotto Department of Biomedical and Clinical Sciences, University of Milan, Milan, Italy
IRCCS Fondazione Don Carlo Gnocchi ONLUS, Milan, Italy
Umair J. Chaudhary UCL Queen Square Institute of Neurolog y, University Colleg
e London, London, UK
National Hospital for Neurology and Neurosurgery, University College London Hospitals NHS Foundation Trust, London, UK
Jose L. Contreras-Vidal Department of Electrical and Computer Engineering, Univers
ity of Houston, Houston, TX, USA
Fernando Cross Villasana Brain Products GmbH, Gilching, Germany
Diana E. Gherman-Nagy Neuroadaptive Human-Computer Interaction, Branden-
University of Technology Cottbus-Senftenberg, Cottbus, Germany
burg
Mathew Rocha Hammerstrom Department of Exercise Science, Physical and Health
Education, The University of Victoria, Victoria, BC, Canada
Christoph S. Herrmann Exp erimental Psychology Lab, Department of Psychol-
Carl-von-Ossietzky Universität, Oldenburg, Germany
ogy,
Cluster for Excellence Hearing for All, Carl-von-Ossietzky Universität, Olden­burg, Germany
Research Center Neurosensory Science, Carl von Ossietzky Universitßt, Oldenburg, Germany
Michael Hoppstädter Brain Products GmbH, Gilching, Germany
Cilia Jaeger Brain Products GmbH, Gilching, Germany
David Kadlec Brain Products GmbH, Gilching, Germany
Marius Klug Neuroadaptive Human-Computer Interaction, Brandenburg Univer-
of Technology Cottbus-Senftenberg, Cottbus, Germany
sity
Daniel S. Kluger Institute for Biomagnetism and Biosignal Analysis, University of Münst
er, Münster, Germany
Alex Kreilinger Brain Products GmbH, Gilching, Ger many
Hannah Kreilinger Brain Products GmbH, Gilching, Germany
Olave E.
Krigolson Theoretical and Applied Neuroscience Laboratory, School of
Exercise Science, University of Victoria, Victoria, BC, Canada