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7 Basic Time Concepts in EEG Practice 83
Fig. 7.3 (a) Activity based
signal magnitude at
on different time-points. At time-points before ~60 ms, the signal magnitude is close to zero (examples shown by arrows) but deviates away from zero from ~60 to 130 ms (examples shown by arrows). (b) The signal magnitude at single time-points is close to zero and deviates away from zero in quick succession (examples shown with arrows). (c) The maximum signal magnitude over short time-intervals (examples highlighted in gray) reveals a coherent pattern across the entire signal duration (thick black line)
from ~60 to ~130 ms before returning to zero. This pattern supports a general interpretation that there is higher activity between ~60 and ~130 ms than at other time-points.
The above interpretation based on time-points is challenged when we consider
7.3b. The signal deviates away from zero and returns close to zero at multiple
Fig. time-points over the entire range. The size of these deviations also varies repeatedly. This scenario does not provide a coherent view of activity as in Fig. rathe
r than considering the signal values at single time-points, consider the signal
7.3a. However,
changes over time-intervals, that is, across multiple neighboring time-points (highlighted areas in Fig. 7.3c). When we consider the maximum deviation in each of
these intervals over the entire signal duration (thick black line), we observe that the activity shows a coherent pattern that is rst high before ~60 ms, with a decrease from ~60 to ~130 ms, followed by an increase again.
These two
views of activity changes over time are not mutually exclusive, where
one is correct and the other incorrect. Instead, they both expand how the concept of
84 S. Viswanathan
activity is practically analyzed. A time-point specic formulation can be appropriate in many scenarios and is the basis for the event-related potentials approach (Chap. be signa
19, event-related potentials). However, an interval-based formulation can
powerful when the signal of interest is an oscillation, as in Fig. 7.3b, where the
l periodically completes a full transition from positive to negative (i.e., one
cycle) and completes k cycles every second (a frequency of k Hertz (Hz)) (see
18: I
Chap.
ntroducti
on to EEG Oscillations and Spectral Analysis).
In summary, the exibility in formulating activity changes over time is possible due to the high time-resolution of EEG. This high time-resolution supports analyses based on single time-points (e.g., every 4 ms with a sampling frequency of 250 Hz) as well as over time-intervals ranging from tens of milliseconds to several seconds.

7.5 Conclusion

In this chapter, we have provided you with an overview of basic time concepts in EEG with a focus on their practical implications. EEG is often referred to as having a high time-resolution. However, the full impact of this feature can be underappreci­ated. A key takeaway from this chapter is how the high immediacy of EEG measurements can inuence practical decisions about how EEG is formulated and analyzed, such as segmentation and time-locking. Importantly, immediacy is a property of the measurement modality and is not linked to a particular experimental design. fMRI also involves continuous recordings and has to address similar con­cerns about extracting trial-specic measures. However, due to fMRIs low imme­diacy, options such as segmentation and time-locking are unavailable. Therefore, in conclusion, considering the role of time carefully in your EEG study can maximize the value provided by EEG as an approach to study brain funct ion.

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Part II
Experimental Design and Good Scientic
Practice
Chapter 8
Designing Your EEG Study
Fernando Cross Villasana
Abstract Numerous factors inuence the
research project. The motivations for doing a study may vary: for example, answer­ing a question left from a previous experiment, exploring the variables involved in a novel eld, or perhaps devising a practical application. These different aims have profound effects on the way a research question is posed, how the hypothesis is derived, the experimental protocol, and the methods used for data analysis. In EEG studies, designing a study also requires consideration of resource availability, participant welfare, and precision of the measurements. Together, these factors guide the design of studies that aim to generate new and reliable knowledge. This chapter aims to present an integral perspective on study design, while highlighting the various nuances to consider at each stage of the process.
Keywords Experimental design · Study design · Experiment · EEG · ERP
design and implementation of a new

8.1 Introduction

This chapter presents a comprehensive overview to guide the reader through the various stages involved in designing an electroencephalography (EEG) research study. However, each of the topics presented is much more extensive than can be covered here. Readers who require a deeper review of each topic can refer to the literature cited for further detail. References to other chapters in this book are also included. A summary of the design process can be visualized in the following Fig.
8.1.
F. Cross Villasana () Brain Products GmbH, Gilching, Germany
© The Author(s), under exclusive license to Springer Nature Switzerland AG 2026
Warbrick (ed.), The EEG Handbook,
T.
https://doi.org/10.1007/978-3-032-20450-9_8
89
90 F. Cross Villasana
Fig. 8.1 Overview of the study design process

8.2 Setting a Research Question

The aim of research is to address gaps or uncertainties in the current state of knowledge in a particular subject. Phrasing the gap in knowledge as a question is a rst step toward narrowing the scope of a research project, dening testable hypotheses, and identifying the appropriate resources to implement the study (Malik & Amin, question is crucial to the success of a study (Farrugia et al.,
2009).
2017; Ratan et al., 2019). Therefore, the proper setting of a research
2010; Thabane et al.,
8 Designing Your EEG Study 91
The source of a research question is inuenced by the context and experience of
the researcher. In basic resear ch, the question often emerges from the results of a previous study or from currently open questions withi n a eld (Malik & Amin,
2017). In applied or clinical research, a problem is rst identied, then rened
ch questions are devised with the goal of improving practical outputs (Ratan
resear et al.,
2019; Thabane et al., 2009). The research question can also result from an idea
that
emerged from the researchers own experience, personal interests, or from
letting imagination roam (Thabane et al., 2009).
Deep knowledge of the topic at hand is crucial for forming an informed research
quest
ion (Farrugia et al.,
s and put together into a theoretical framework that will specify the concepts
source
2010). This knowledge can be gathered from different
behind the current project (Kivunja, 2018). An important initial step is to perform a revie
w of the literature to identify the current trends, methods, technologies, and open questions in the eld (Fandino, to
Evaluate an EEG Research Paper) contains insights on how to extract the most
2019; Farrugia et al., 2010). Chapter 36 (How
relevant information from scientic literature. Systematic reviews and overviews of reviews (meta-reviews) are excellent sources to learn the elds broad perspective and current state of the art (Hunt et al., original
studies that are relevant to the aims of the current research project. It is
2018). Reviews can also point toward the
important to consider ones own limitations and biases when collecting and orga­nizing information (Niso et al.,
2022). In this sense, exchange with peers (Niso et al.,
2022) and interviews with experts or mentors can be very helpful for rening the
resear
ch question (Farrugia et al., 2010; Thabane et al., 2009). Experts can provide
orien
tation through the literature and share their rsthand experience on the practical details when researching a particular subject. In applied and clinical contexts, eld investigation with the population is particularly useful to identify relevant issues from daily practice that research can address (Farrugia et al.,
2010; Thabane et al.,
2009).
When building the theoretical framework, a critical analysis of the state of the art will help to rene the research question. How complete is the knowledge to date? Is there an existing theory that claries the current research question, or are there perhaps competing theories? Are there only isolated observations and disconnected ideas? What are the current uncertainties? Likewise, when checking singular research reports, consider methodological concerns to further inform the research question: Was a particular sample too small? Were there confounding factors? Were there issues during data collection or processing? Do you detect logical fallacies in the interpretation of results? Further insights into the critical reading of scientic literature can be found in Chap.
The setting
of the research question is a dynamic process where an initial question
can be adapted as more information is gathered (Doody & Bailey,
36.
2016; Haynes,
2006). Besides topic-specic information, elements like the feasibility of implemen-
tation,
resource availability, institutional support, or ethical concerns also have inuence in shaping the research question (Fandino, 2019; Ratan et al., 2019). Formu
lating the research question can be challenging. To aid the question setting
process, various guidelines have been propos ed (e.g. Fandino, 2019; Farrugia et al.,
92 F. Cross Villasana
2010; Ratan et al., 2019; Thabane et al., 2009). For example, the FINER framework
provides criteria for assuring the quality of a research question, so that it is Feasible, Interesting, Novel, Ethical, and Relevant (Farrugia et al.,
2009). Guidelines often include checklists to ensure that the research questions
y with the criteria (e.g. Fandino,
compl lines can be a helpful tool for clarifying the research question. It is worth searching for a suitable guideline that applies to the particular research eld at hand.
2019). In this way, question-setting guide-
2010; Thabane et al.,

8.3 Setting a Hypothesis

8.3.1 Dening Hypotheses
Once a research question is in place, it is furt her narrowed into a series of hypoth­eses. A hypothesis can be dened as a statement that proposes an explanation for a phenomenon. It is a proposed answer to the research question and serves as a basis for empirical testing (Bulajic et al.,
esis mostly involves a prediction about how a particular electromagnetic
hypoth index relates to a specic condition, such as an experimental treatment, group membership, or site of recording (Keil et al.,
Does the resting state alpha power affect subseq uent task performance?a hypoth­esis can be derived: Greater resting alpha power correlates with increased perfor­mance in a following task.During the research study, evidence is collected that can be in favor of or against the hypothesis. Therefore, the hyp othesis is the main guide for what data will be collected and how it will be analyzed (Keil et al., 2014; Thompson & Skau, 2023).
Hypotheses necessarily contemplate a relationship between variables (Thompson
&
Skau, 2023). In experimental research, one variable(s) is manipulated to produce
an
effect on another variable(s) that is measured by the experimenter. The manipu­lated variable is known as the independent variable (IV), while the affected variable is the dependent variable (DV). For example, in the hypothesis Greater task difculty produces greater mid-line theta amplitude,task difculty is the indepen­dent variable that is manipulated by the experimenter. Meanwhile, the amplitude of midline theta induced by the task is the dependent variable.
Not all studies are experimental, and other approaches to research can be implemented. In correlational research, no variable is manipulated; rather, the relationship between co-occurring variables is investigated. A hypothesis of this type can be: Alpha peak frequency increases with age between childhood and adolescence. In this case, neither alpha peak frequency nor the ageing of the participants is deliberately manipulated, but both are measured in search of a correlation between them.
In explor hypothesis with the aim of identifying relevant variables. Since exploratory studies involve testing multiple varia bles without a hypothesis, stricter statistical controls
atory studies, measurements can be rst performed without a specic
2012; Jeong & Kwon, 2006). In EEG, a
2014). As an example, for the question
8 Designing Your EEG Study 93
are necessary to prevent outputs produced by chance from being perceived as meaningful observations (Luck & Gaspelin, times,
incidental ndings are encountered during experimental or correlational
2017; Szucs & Ioannidis, 2017). Some-
studies that were not predicted by the hypothesis. Any new hypothesis derived from observations during the analysis phase should be regarded as exploratory and receive the corresponding statistical controls. This prevents making an interpretation of observations that potentially resulted from chance (Luck & Gaspelin,
Hamalai
&
nen, 2017).
2017; P
uce

8.3.2 Testing the Hypothesis

To test a hypothesis using statistics, the most common approach is null hypothesis testing. In this approach, the experimental hypothesis must be accompanied by a null hypothesis (H
ables. When paired with the null hypothesis, the experimental hypothesis becomes the alternative hypothesis (H evidence against the proposal that there is no relationship between the experimental variables (Pernet, 2015). Rejecting the null hypothesis does not automatically mean that
the alternative hypothesis is true (Pernet, 2015; Szucs & Ioannidis, 2017). However, it indicates that a deeper investigation is needed into the relationship between the variables. This should be based on the theoretical framework and statistical analyses (Luck & Gaspelin, 2017; Szucs & Ioannidis, 2017).
Null hypothesis testing is a widely used method for scientic inference in
cience and related elds. However it has limitations and has received criti-
neuros cism, mostly regarding misunderstandings about the meaning of rejecting the null hypothesis, and the statistical criteria used for rejection (Szucs & Ioannidis, This
has led to a series of recommendations and complementary approaches to strengthen null hypothesis testing. From an experimental design perspective, recent years have seen an emphasis on pre-registration of experiments (Niso et al., this way, the public can identify the original hypotheses, the theoretical background, and the intended methodology. Great emphasis has also been placed on doing replication studies to strengthen previous observations and facilitate new predictions (Luck & Gaspelin,
researchers to conrm and aggregate results from previous studies (Nebe et al.,
other
2023). Having a solid theoretical background with clear predictions is also important
to support arguments in favor of the experimental effects after rejecting the null hypothesis (Luck & Gaspelin, 2017; Szucs & Ioannidis, 2017). The former pro­posal
s are accompanied by recommendations for statistics, such as using power estimation to nd an optimal sample size, and reporting the effect size of the results (Keil et al.,
), which proposes that no relationship exists between the given vari-
0
). Testing the null hypothesis requires gathering
A
2022).
2017; Nebe et al., 2023; Niso et al., 2022). Data sharing allows
2014; Niso et al., 2022; Szucs & Ioannidis, 2017).
2017).
In
94 F. Cross Villasana

8.4 Design of the Study

With the alternative and null hypotheses set in place, it is time to design a study where they can be put to test. The aim is to ne-tune all factors involved in data collection to obtain the clearest possible evidence for testing the hypotheses. Impor­tantly, all procedures decided upon must comply with ethical guidelines (e.g., country regulations) and be approved by the local ethics committee.
The nuances of experimental design can be complex. However, the key point is to
it possible to attribute the effects observed on the dependent variable to the
make manipulation of the independent variable. In other words, the potential effects of other variables, such as noise in the recordings, length of the experiment, participant age, or random variation, should be minimized through effective experimental design. These additional variables that affect the measurement are known as confounds.
In EEG studies, the factors to ne-tune are many indeed. These include elements such as the criteria for participant selection, sample size, number of trials, hardware settings, data processing methods, or participant well-being. Often, a decision regarding one factor will affect other factors, which is why ne-tuning them fre­quently involves trade-offs. Each research study is unique, requiring its own set of decisions during its design. A good initial source of information when designing a study is found in previous publications using similar methods. Additionally, con­sulting sources on good scientic practice (e.g. Niso et al., lines (e.g. Keil et al., 2014), and literature about the EEG index used in the study can guide
well-informed decisions during experiment al design. In the following, we will
cover the main aspects to consider.
2022), technical guide-

8.4.1 Contextualization of the Hypothesis

The main questions at this point are how to generate the evidence necessary to test the hypothesis, what strategies to follow to obtain the data, and how the data generated will be analyzed.
8.4.1.1 Experimental Paradigm
The choice be recorded, should be suitable to assess the neurocognitive process under investi­gation. There are two main kinds of paradigms used in human neuroscience. In neurocognitive studies, the most common kind by far is the event-related-design, where brain activity is analyzed around the occurr ence of a discrete event, such as the presentation of a sensory stimulus, the execution of a response, or other actions. This design is useful to track the fast pace of brain responses during perception and
of experimental task or paradigm, and the situation in which the data will