PS-2020a / part17
.pdfDICOM PS3.17 2020a - Explanatory Information |
Page 751 |
XXX.3.7.3 Encoding Details
XXX.3.7.3.1 Volumetric Presentation State Relationship Module Recommendations
Table XXX.3.7-1. Volumetric Presentation State Relationship Module Recommendations
Attribute Name |
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Tag |
Comment |
VolumetricPresentationStateInputSequence |
(0070,1201) |
Two items are this sequence referencing one |
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volume for each data type |
>ITEM 1 |
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>Volumetric Presentation Input Number |
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(0070,1207) |
Set to 1 |
>Presentation Input Type |
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(0070,1202) |
Set to "VOLUME". |
>Referenced Image Sequence |
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(0008,1140) |
Sequence of frames with Data Type (0018,9808) |
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value of TISSUE_INTENSITY |
>>Table 10-3 “Image SOP Instance Reference Macro Attributes” in PS3.3 |
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>Crop |
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(0070,1204) |
Set to "NO". |
>ITEM 2 |
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>Volumetric Presentation Input Number |
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(0070,1207) |
Set to 2 |
>Presentation Input Type |
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(0070,1202) |
Set to "VOLUME". |
>Referenced Image Sequence |
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(0008,1140) |
Sequence of frames with Data Type (0018,9808) |
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value of FLOW_VELOCITY |
>>Table 10-3 “Image SOP Instance Reference Macro Attributes” in PS3.3 |
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>Crop |
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(0070,1204) |
Set to "NO". |
XXX.3.7.3.2 Presentation View Description Module Recommendations |
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Table XXX.3.7-2. Presentation View Description Module Recommendations |
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Attribute Name |
Tag |
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Comment |
Anatomic Region Sequence |
(0008,2218) |
Set to (80891009, SCT, "Heart") |
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View Code Sequence |
(0054,0220) |
Set to the code triplet for the view. |
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Typical coded values: |
(399214001, SCT, "Apical four chamber") (399232001, SCT, "Apical two chamber") (443698002, SCT, "Transesophageal short axis view")
XXX.3.7.3.3 Multi-Planar Reconstruction Geometry Module Recommendations
Table XXX.3.7-3. Multi-Planar Reconstruction Geometry Module Recommendations
Attribute Name |
Tag |
Comment |
Multi-Planar Reconstruction Style |
(0070,1501) |
Set to PLANAR |
MPR Thickness Type |
(0070,1502) |
Set to THIN |
MPR View Width Direction |
(0070,1507) |
Set to the direction of the top row of the MPR view in the |
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VPC-RCS |
MPR View Width |
(0070,1508) |
Set to the width of the top row of the MPR view in the |
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VPC-RCS |
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DICOM PS3.17 2020a - Explanatory Information |
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Attribute Name |
Tag |
Comment |
MPR View Height Direction |
(0070,1511) |
Set to the direction of the leftmost column of the MPR view |
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in the VPC-RCS |
MPR View Height |
(0070,1512) |
Set to the width of the leftmost column of the MPR view in |
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the VPC-RCS |
MPR Top Left Hand Corner |
(0070,1505) |
Settoan(x,y,z)pointintheVPC-RCSoftheupperleftcorner |
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of the MPR view |
XXX.3.7.3.4 Volumetric Presentation State Display Module Recommendations
Table XXX.3.7-4. Volumetric Presentation State Display Module Recommendations
Attribute Name |
Tag |
Comment |
Pixel Presentation |
(0008,9205) |
Set to "TRUE_COLOR" |
Presentation State Classification |
(0070,1801) |
Contains two items, one for each classification component. |
Component Sequence |
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>ITEM 1 |
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>Component Type |
(0070,1802) |
Set to "ONE_TO_RGBA" |
>Component Input Sequence |
(0070,1803) |
Only one item in this sequence since the component has only |
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one input. |
>>Input Set Index |
(0070,1804) |
Set to "1" for the MPR slice of the TISSUE_INTENSITY data |
>RGB LUT Transfer Function |
(0028,140F) |
Set to "EQUAL_RGB" to map to grayscale RGB values. |
>Alpha LUT Transfer Function |
(0028,1410) |
Set to "IDENTITY" |
>ITEM 2 |
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>Component Type |
(0070,1802) |
Set to "ONE_TO_RGBA" |
>Component Input Sequence |
(0070,1803) |
Only one item in this sequence since the component has only |
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one input. |
>>Input Set Index |
(0070,1804) |
Set to "2" for the MPR slice of the FLOW_VELOCITY data |
>RGB LUT Transfer Function |
(0028,140F) |
Set to "TABLE" to be able to map to colors representing the flow |
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velocities towards and away from the ultrasound transducer |
>Alpha LUT Transfer Function |
(0028,1410) |
Set to "IDENTITY" |
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Definitions of lookup tables left out for brevity. |
Presentation State Compositor |
(0070,1805) |
Set to one item that defines the threshold compositing of the two |
Component Sequence |
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data types |
>WeightingTransferFunctionSequence |
(0070,1806) |
ContainsthetwoWeightingLUTsfromSectionXXX.5.4tocreate |
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the threshold composting from two RGBA inputs: |
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•IfthemagnitudeoftheFLOW_VELOCITYinputisgreaterthan |
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the magnitude of the TISSUE_INTENSITY input, display the |
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MPR of the FLOW_VELOCITY data. |
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•Otherwise, display the MPR of the TISSUE_INTENSITY data |
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Definitions of lookup tables left out for brevity. |
ICC Profile |
(0028,2000) |
SettoanICCProfiledescribingthetransformationoftheresulting |
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RGB image into PCS-Values. |
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DICOM PS3.17 2020a - Explanatory Information |
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XXX.3.8 Blending with Functional Data, e.g., PET/CT or Perfusion Data
XXX.3.8.1 User Scenario
To aid in the exact localization of functional data, e.g., the accumulation of a radioactive tracer which is measured with a position emissiontomography(PET)scan,thecolorizedfunctionaldataisblendedwithe.g.,aCTscanwhichshowsthecorrespondinganatomy in detail.
CT Image
Blended Image
PET Image
Figure XXX.3.8-1. Blending with Functional Data
XXX.3.8.2 Encoding Outline
To create a Planar MPR view which shows the colorized PET data blended with the grayscale CT data the Planar MPR VPS IOD in- stance defines via the Volumetric Presentation State Display Module a volumetric pipeline with 2 inputs.
Volume graphics input |
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MPR and |
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Projection |
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CT Data |
VOI LUT |
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MPR |
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MPR Geometry |
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PET Data |
VOI LUT |
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Cropping |
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MPR |
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Registration |
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Graphic |
Annotation |
Volumetric |
PCS |
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Graphics |
PCS |
Presentation |
Transform |
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State Display |
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Figure XXX.3.8-2. Planar MPR VPS Pipeline for PET/CT Blending
ThefirstinputtotheVolumetricPresentationState(VPS)Displaypipelineprovidesthe MPRviewoftheanatomyinthe display,which will be left as grayscale in the VPS Display pipeline. This will provide the backdrop to the colorized PET input to be subsequently overlaid in the second stage of the VPS pipeline.
SincePETandCTdatasetsusuallyhavedifferentresolutionsandarenotaligned(eveniftheyreferencethesameFrameofReference IODinstance)thedatasetsarespatiallyregisteredtotheVolumetricPresentationStateRCS.Fromtheseregisteredvolumesgrayscale Planar MPRs are generated using the same MPR geometry.
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DICOM PS3.17 2020a - Explanatory Information |
TheVolumePresentationStateDisplaypipelinethenblendstheMPRsintooneview(seeSectionFF.2.3.2.1“ClassificationComponent
Components” in PS3.4).
IntheVolumetricPresentationStateDisplayModulethePresentationStateClassificationComponentSequence(0070,1801)defines classification components for mapping the MPRs to RGBA.
The first MPR (CT) view is mapped to grayscale RGBA by an EQUAL_RGB RGB LUT Transfer Function (0028,140F). Alpha LUT Transfer Function (0028,1410) is set to NONE, since the anatomy will be rendered as completely opaque background.
For the second MPR (functional, PET) view an RGBA transfer function maps the tracer intensity values to a color range. Alpha-2 is set to 0 for black pixels, making them completely transparent. Alpha-2 for all other pixels is set to a single value between 0 and 1, depending on the intended transparency of the functional data.
It is envisioned that display applications provide mechanisms to the user for manipulating the Alpha-2 value which has been set in the Presentation State, thereby allowing the user to control the visibility of the anatomy vs. the functional data.
TheRGBCompositorthenperforms"PartiallyTransparentAoverB"compositingasdescribedinSectionXXX.5.2bypassingthrough
Alpha-2 as Weight-2 and (1- Alpha-2) as Weight-1
Figure XXX.3.8-3 shows details of the classification and compositing for the blended PET/CT Planar MPR.
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One Input |
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CT |
Scalar value |
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RGB-1 |
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MPR |
RBGA |
ICC Input Profile |
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(EQUAL_RGB) |
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Alpha-1 |
RGB Compositor |
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Profile |
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Connection |
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(one minus Alpha-2 |
RGB |
PCS-Values |
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Space |
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weighting) |
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Transform |
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Alpha-2 |
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One Input |
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PET |
Scalar value |
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RGB-2 |
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MPR |
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RBGA |
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Figure XXX.3.8-3. PET/CT Classification and Compositing Details
XXX.3.8.3 Encoding Details
XXX.3.8.3.1 Volumetric Presentation State Relationship Module Recommendations
Table XXX.3.8-1. Volumetric Presentation State Relationship Module Recommendations
Attribute Name |
Tag |
Comment |
Volumetric Presentation State Input |
(0070,1201) |
Contains two items: one for the CT volume input and one |
Sequence |
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for the PET volume input. |
>ITEM 1 |
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>Presentation Input Type |
(0070,1202) |
Set to "VOLUME". |
>Referenced Image Sequence |
(0008,1140) |
Set reference(s) to the image(s) that make(s) up the CT |
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input volume. |
>Referenced Spatial Registration |
(0070,0404) |
Set to reference the Spatial Registration instance which |
Sequence |
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registers the CT input to the VPS RCS. |
>Window Center |
(0028,1050) |
Set either Window Center and Window Width or VOI LUT |
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Sequence (0028,3010). |
>Window Width |
(0028,1051) |
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>Crop |
(0070,1204) |
Set to "NO". |
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Attribute Name |
Tag |
Comment |
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>ITEM 2 |
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>Presentation Input Type |
(0070,1202) |
Set to "VOLUME". |
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>Referenced Image Sequence |
(0008,1140) |
Set reference(s) to the image(s) that make(s) up the PET |
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input volume. |
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>Referenced Spatial Registration |
(0070,0404) |
Set reference to the Spatial Registration instance which |
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Sequence |
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registers the PET input to the VPS RCS. |
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>Window Center |
(0028,1050) |
Set either Window Center and Window Width or VOI LUT |
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Sequence (0028,3010). |
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>Window Width |
(0028,1051) |
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>Crop |
(0070,1204) |
Set to "NO". |
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XXX.3.8.2.3 Volumetric Presentation State Display Module Recommendations |
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Table XXX.3.8-3. Volumetric Presentation State Display Module Recommendations |
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Attribute Name |
Tag |
Comment |
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Pixel Presentation |
(0008,9205) |
Set to "TRUE_COLOR" |
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Presentation State Classification |
(0070,1801) |
Contains two items, one for classifying the CT data and one |
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Component Sequence |
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for classifying the PET data. |
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>ITEM 1 |
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>Component Type |
(0070,1802) |
Set to "ONE_TO_RGBA" |
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>Component Input Sequence |
(0070,1803) |
Contains one item in this sequence since the component has |
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only one input. |
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>>Input Set Index |
(0070,1804) |
Set to "1" for the anatomy view. |
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>RGB LUT Transfer Function |
(0028,140F) |
Set to "EQUAL_RGB" to map to grayscale RGB values. |
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>Alpha LUT Transfer Function |
(0028,1410) |
Set to "NONE". The anatomy is completely opaque. |
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>ITEM 2 |
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>Component Type |
(0070,1802) |
Set to "ONE_TO_RGBA" |
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>Component Input Sequence |
(0070,1803) |
Contains one item in this sequence since the component has |
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only one input. |
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>>Input Set Index |
(0070,1804) |
Set to "2" for the functional view. |
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>RGB LUT Transfer Function |
(0028,140F) |
Set to "TABLE" to be able to map functional data to a color |
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range. |
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>Alpha LUT Transfer Function |
(0028,1410) |
Set to "TABLE" to be able to set a transparency for the |
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segmentation. |
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Definitions of lookup tables left out for brevity. |
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PresentationStateCompositorSequence |
(0070,1805) |
Contains one item |
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>Weighting Transfer Function Sequence |
(0070,1806) |
Contains the two Weighting LUTs from Section XXX.5.2 to |
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createthe"PartiallyTransparentAoverB"compostingoftwo |
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RGBA inputs. |
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Definitions of lookup tables left out for brevity. |
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ICC Profile |
(0028,2000) |
Set to an ICC Profile describing the transformation of the |
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resulting RGB image into PCS-Values. |
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DICOM PS3.17 2020a - Explanatory Information |
XXX.3.9 Stent Stabilization
Figure XXX.3.9-1. Stent Stabilization
XXX.3.9.1 User Scenario
When evaluating the placement of a coronary artery stent, the stent is often viewed in each phase of a multiphase cardiac CT. An oblique Planar MPR MIP slab is typically used. Because of cardiac motion the oblique plane must be repositioned for each phase in order to yield the best view of the stent in that phase, resulting in a sequence of Planar MPR views with different geometry but identical display parameters.
XXX.3.9.2 Encoding Outline
The storage of the view shown in Figure XXX.3.9-1 requires the generation of one Planar MPR Volumetric Presentation State per cardiac phase in the input data. These presentation states form a Sequence Collection.
XXX.3.9.3 Encoding Details
XXX.3.9.3.1 Volumetric Presentation State Identification Module Recommendations
Table XXX.3.9-1. Volumetric Presentation State Identification Module Recommendations
Attribute Name |
Tag |
Comment |
Presentation Sequence Collection UID |
(0070,1102) |
Set to the same UID value in each of the Presentation State |
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instances indicating the views are sequentially ordered. |
Presentation Sequence Position Index |
(0070,1103) |
Set to "1" for first phase, "2" for second phase, etc. |
XXX.3.9.3.2 Volumetric Presentation State Relationship Module Recommendations
Table XXX.3.9-2. Volumetric Presentation State Relationship Module Recommendations
Attribute Name |
Tag |
Comment |
Volumetric Presentation State Input |
(0070,1201) |
Each VPS contains a single Input Sequence item referencing |
Sequence |
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a single phase within a multiphase acquisition. |
>Referenced Image Sequence |
(0008,1140) |
Setreference(s)totheimage(s)thatmakeuptheinputvolume |
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for this phase. |
XXX.3.9.3.3 Presentation View Description Module Recommendations
This Module is replicated in each of the created Volumetric Presentation States.
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Table XXX.3.9-3. Presentation View Description Module Recommendations |
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Attribute Name |
Tag |
Comment |
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View Code Sequence |
(0054,0220) |
Forthisparticularexample,CID2“AnatomicModifier” |
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provides applicable values: |
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>Code Value |
(0008,0100) |
Set to "21114003" |
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>Coding Scheme Designator |
(0008,0102) |
Set to "SCT" |
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>>Code Meaning |
(0008,0104) |
Set to "Oblique" |
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XXX.3.9.3.4 Presentation Animation Module Recommendations
This Module is replicated in each of the created Volumetric Presentation States.
Table XXX.3.9-4. Presentation Animation Module Recommendations
Attribute Name |
Tag |
Comment |
Presentation Animation Style |
(0070,1A01) |
Set to "INPUT_SEQ" |
Recommended Animation Rate |
(0070,1A03) |
Set to "4" (steps per second) |
XXX.3.10 Highlighting Areas of Interest in Volume Rendered View
XXX.3.10.1 User Scenario
The goal is the Identification and Annotation of a bilateral iliac stenosis with an acquired CT scan. The objective is the visualization of a leg artery with a three-dimensional annotation. There are also informative two-dimensional annotations.
XXX.3.10.2 Encoding Outline
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3D Voxel Data |
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2D Pixel Data |
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Volume Graphic Annotation |
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Graphic |
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Projection |
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Runoff r |
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Runoff l |
Graphic Annotation |
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Graphic |
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A. renalis r |
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Annotation |
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A.renalis l |
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Volume Input |
VOI LUT |
Spatial |
Cropping |
Classification RGBA |
Volume |
PCS-Values |
Graphic |
PCS-Values |
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Registration |
Rendering |
Layer |
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Cropping Specification Index, |
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Render |
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Volume Cropping |
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Geometry |
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Render Display |
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Figure XXX.3.10-1. Highlighted Areas of Interest Volume Rendered View Pipeline
Specifying the classification transfer function, it is possible to provide a color and adjust the opacity of the rendering of different Hounsfield Units. The Render Shading Module is used to adjust parameters like the shininess and the different reflections. The Volumetric Graphic Annotation is used to display the active vessel selection. The Volumetric Graphic Annotation is a projection in the 3D Voxel Data, while the Graphic Annotation module provides annotation made directly in the 2D pixel data. Both types of annotation specify a Graphic Layer in which the annotation is displayed.
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DICOM PS3.17 2020a - Explanatory Information |
XXX.3.10.3 Encoding Details
XXX.3.10.3.1 Volume Presentation State Relationship Module Recommendations
Table XXX.3.10.3.1-1. Volume Presentation State Relationship Module Recommendations
Attribute Name |
Tag |
Comment |
Volumetric Presentation Input Set Sequence |
(0070,120A) |
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Item #1 |
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>Volumetric Presentation Input Set UID |
(0070,1209) |
Set to UID1 |
>Presentation Input Type |
(0070,1202) |
Set to VOLUME |
>Referenced Image Sequence |
(0008,1140) |
Reference to CT volume |
Volumetric Presentation State Input Sequence |
(0070,1201) |
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Item #1 |
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>Volumetric Presentation Input Number |
(0070,1207) |
Set to 1 |
>Volumetric Presentation Input Set UID |
(0070,1209) |
SettoUID1,referencingthefirstiteminthe |
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Volumetric Presentation Input Set |
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Sequence (0070,120A) |
>Include VOI LUT Macro Table C.11-2B |
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Set to identity |
>Crop |
(0070,1204) |
Set to NO |
XXX.3.10.3.2 Volume Render Geometry Module Recommendations
Table XXX.3.10.3.2-1. Volume Render Geometry Module Recommendations
Attribute Name |
Tag |
Comment |
Render Projection |
(0070,1602) |
Set to "ORTHOGRAPHIC" |
Viewpoint Position |
(0070,1603) |
Defines the viewpoint specifying a standard anterior |
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coronal view. |
Viewpoint Look At Point |
(0070,1604) |
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Viewpoint Up Direction |
(0070,1605) |
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Render Field of View |
(0070,1606) |
Defines a field of view that covers the entire range |
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of the scan. |
Rendering Method |
(0070,120D) |
Set to "VOLUME_RENDERED" |
XXX.3.10.3.3 Render Shading Module Recommendations
Table XXX.3.10.3.3-1. Render Shading Module Recommendations
Attribute Name |
Tag |
Comment |
Shading Style |
(0070,1701) |
Set to "DOUBLESIDED" |
Ambient Reflection Intensity |
(0070,1702) |
Set to 0.5 |
Light Direction |
(0070,1703) |
Set to (0.0, 0.0, -1.0) |
Diffuse Reflection Intensity |
(0070,1704) |
Set to 0.5 |
Specular Reflection Intensity |
(0070,1705) |
Set to 0.5 |
Shininess |
(0070,1706) |
Set to 0.2 |
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XXX.3.10.3.4 Render Display Module Recommendations |
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Table XXX.3.10.3.4-1. Render Display Module Recommendations |
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Attribute Name |
Tag |
Comment |
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Pixel Presentation |
(0008,9205) |
Set to "TRUE_COLOR" |
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Volume Stream Sequence |
(0070,1A08) |
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Item #1 of Volume Stream Sequence |
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>Volumetric Presentation Input Set UID |
(0070,1209) |
Set to UID1, referencing the first item in the |
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Volumetric Presentation Input Set Sequence |
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(0070,120A) |
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>Presentation State Classification Component |
(0070,1801) |
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Sequence |
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>Item #1 of Presentation State Classification Component Sequence |
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>>Component Type |
(0070,1802) |
Set to ONE_TO_RGBA |
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>>Component Input Sequence |
(0070,1803) |
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>>Item #1 of Component Input Sequence |
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>>>Volumetric Presentation Input Index |
(0070,1804) |
Set to 1 referencing the first item in Volumetric |
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PresentationStateInputSequence(0070,1201) |
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>>RGB LUT Transfer Function |
(0028,140F) |
Set to TABLE |
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>>Alpha LUT Transfer Function |
(0028,1410) |
Set to TABLE |
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>>RGB Palette Color Lookup Table Descriptors and Data |
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>>Alpha Palette Color Lookup Table Descriptor and Data |
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Presentation State Compositor Component |
(0070,1805) |
empty |
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Sequence |
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ICC Profile |
(0028,2000) |
Value corresponding to IEC 61966-2-1:1999 |
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Color Space |
(0028,2002) |
Set to SRGB |
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XXX.3.10.3.5 Volumetric Graphic Annotation Module Recommendations
Table XXX.3.10.3.5-1. Volumetric Graphic Annotation Module Recommendations
Attribute Name |
Tag |
Comment |
Volumetric Annotation Sequence |
(0070,1901) |
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Item #1 |
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>Graphic Data |
(0070,0022) |
Settoasequenceof(x,y,z)pointsthatfollow |
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the right femoral artery |
>Graphic Type |
(0070,0023) |
Set to MULTIPOINT |
>Graphic Layer |
(0070,0002) |
Set to 1 |
>Annotation Clipping |
(0070,1907) |
Set to NO |
>Text Object Sequence |
(0070,0008) |
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>>Unformatted Text Value |
(0070,0006) |
Set to "Runoff" |
- Standard -
Page 760 DICOM PS3.17 2020a - Explanatory Information
XXX.3.10.3.6 Graphic Layer Module Recommendations
Table XXX.3.10.3.6-1. Graphic Layer Module Recommendations
Attribute Name |
Tag |
Comment |
Graphic Layer Sequence |
(0070,0060) |
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>Graphic Layer |
(0070,0002) |
Set to "Runoff R" |
>Graphic Layer Order |
(0070,0062) |
Set to 1 |
XXX.3.11 Colorized Volume Rendering of Segmented Volume Data
XXX.3.11.1 User Scenario
A tumor in a volume has been identified and segmented. In volume rendered views the tumor is highlighted while preserving inform- ation about its relationship to surrounding anatomy.
Figure XXX.3.11-1. Colorized Volume Rendering of Segmented Volume Data Pipeline
XXX.3.11.2 Encoding Outline
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3D Voxel Data |
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2D Pixel Data |
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Volume Graphic Annotation |
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RGBA |
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Projection |
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VOI LUT |
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Cropping |
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Classification |
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Bounding Box |
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Volume |
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Blending |
RGBA |
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(B over A) |
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Graphic |
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Volume 1 Input |
VOI LUT |
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Cropping |
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Classification |
RGBA |
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Annotation |
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Seg Object: |
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Vessels |
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Volume |
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RGBA |
Volume |
PCS-Values |
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Graphic |
PCS-Values |
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Blending |
Rendering |
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Layer |
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(B over A) |
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VOI LUT |
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Cropping |
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Classification |
RGBA |
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Render Shading |
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Seg Object |
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Tumor |
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Cropping Specification Index values, |
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Render |
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Volume Cropping |
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Geometry |
Render Display
Figure XXX.3.11-2. Segmented Volume Rendering Pipeline
- Standard -