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List ofcontributors
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Sara Ali
Haematopoietic Stem Cell Laboratory, The Francis Crick Institute, London, United Kingdom
David Avigan
Division of Hematology Oncology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, United States
Jodie L. Babitt
Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts, United States
Mohsin Badat
The Laboratory of Gene Regulation, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, UnitedKingdom
Luciano Baronciani
Angelo Bianchi Bonomi Hemophilia and Thrombosis Center, Foundation IRCCS Ca’Granda Ospedale Maggiore Policlinico, Milan, Italy
Kenneth J. Clemetson
University of Berne, Theodor Kocher Institute, Berne, Switzerland
Björn Dahlbäck
Department of Translational Medicine, Lund University, University Hospital, Malmö, Sweden
Alexey Danilov
Department of Hematology and Hematopoietic Stem Cell Transplant, City of Hope National Medical Center, Duarte, California, United States
Francesco Dazzi
School of Cancer Sciences, King’s College Hospital, London
Carla Dinardo
University of São Paulo, São Paulo, Brazil
William E. Evans
Pharmacy and Pharmaceutical Sciences Department, StJude Children’s Research Hospital, Memphis, Tennessee, United States
Colin Brown
Histocompatibility and Immunogenetics Laboratory NHS Blood and Transplant, Colindale, London,
King’s College London, Faculty of Life Sciences & Medicine, London, United Kingdom
Dominique Bonnet
Haematopoietic Stem Cell Laboratory, The Francis Crick Institute, London, United Kingdom
Winnie Chong
Histocompatibility and Immunogenetics Service Devel­opment Laboratory, NHS Blood and Transplant, London, UnitedKingdom
United Kingdom
Bita Fakhri
Division of Hematology, Department of Medicine, Stanford University, Palo Alto, California, United States
Jude Franklin
Department of Pathology, Case Western Reserve University, Cleveland, Ohio, United States
Tomas Ganz
Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California, United States
Keith Gomez
Haemophilia Centre and Thrombosis Unit, Royal Free London NHS Foundation Trust, London, United Kingdom
x List ofcontributors
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Wilson I. Gonsalves
Division of Hematology, Mayo Clinic, Rochester, Minnesota, United States
Torsten Haferlach
MLL Munich Leukemia Laboratory, Munich, Germany
Amye M. Harrigan
Department of Medicine, Division of Hematology, QEII Health Sciences Centre, Dalhousie University, Halifax, NS, Canada
Douglas Higgs
The Laboratory of Gene Regulation, MRC Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom
Andreas Hillarp
Department of Medical Biochemistry, Oslo University Hospital, Oslo, Norway
Eric D. Hsi
Department of Pathology, Wake Forest University, Winston- Salem North Carolina, United States
Shunsuke Kimura
Department of Pathology, Hematological Malignancies Program, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
Pramila Krishnamurthy
King’s College Hospital, London
Hillard M. Lazarus
Department of Medicine, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States
Lucio Luzzatto
Department of Haematology and Blood Transfusion, Muhimbili University College of Health Sciences, Dar- es- Salaam, Tanzania
Dina Mahdi
Department of Haematology, University College Hospitals London, London, United Kingdom
Chad M. McCall
Carolinas Pathology Group, Charlotte, North Carolina, United States
Giovanni Insuasti- Beltran
Department of Pathology, Wake Forest University, Winston- Salem North Carolina, United States
Deena Iskander
Centre for Haematology, Department of Immunology and Inflammation, Imperial College London, Hammersmith Hospital, London, United Kingdom
Elias Jabbour
Department of Leukemia, University of Texas M.D. Anderson Cancer Center, Houston, Texas, United States
Zachary Jackson
Department of Pathology, Case Western Reserve University, Cleveland, Ohio, United States
Leo Kager
St Anna Children’s Hospital, St. Anna Children’s Cancer Research Institute, Medical University Vienna, Vienna, Austria
Hagop Kantarjian
Department of Leukemia, University of Texas M.D. Anderson Cancer Center, Houston, Texas, United States
William M. McKillop
Department of Pediatrics, Medical College of Wisconsin, Milwaukee, Wisconsin, United States
Donal P. McLornan
Department of Haematology, University College Hospitals London, London, United Kingdom
Jeffrey A. Medin
Departments of Pediatrics and Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin, United States
Charles G. Mullighan
Department of Pathology, Hematological Malignancies Program, St. Jude Children’s Research Hospital, Memphis, Tennessee, United States
Elizabeta Nemeth
Department of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California, United States
Susan O’Brien
University of California at Irvine, Irvine, California, UnitedStates
Anastasios Karadimitris
Department of Haematology and Blood Transfusion, Muhimbili University College of Health Sciences, Dar- es- Salaam, Tanzania
Prateek Pophali
Division of Hematology Oncology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, United States
List ofcontributors xi
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Victoria Potter
King’s College Hospital, London
Drew Provan
Centre for Haematology, Blizard Institute, Barts & The London School of Medicine & Dentistry, Queen Mary University of London, London, United Kingdom
Christopher Saunders
Serviço de Hematologia, Hospital Santo António dos Capuchos, Centro Hospitalar e Universitário Lisboa Central, Lisboa, Portugal
David T. Scadden
Department of Stem Cell and Regenerative Biology, Harvard Stem Cell Institute, Harvard University and Center for Regenerative Medicine, Boston, Massachusetts, United States
Christian Scharenberg
Department of Hematology, Skaraborgs Hospital Skövde, Skövde, Sweden
Omid Seidizadeh
Angelo Bianchi Bonomi Hemophilia and Thrombosis Center, Foundation IRCCS Ca’Granda Ospedale Maggiore Policlinico, Milan, Italy
Department of Pathophysiology and Transplantation, Università degli Studi di Milano, Milan, Italy
John W. Semple
Division of Hematology and Transfusion Medicine, Lund University, Lund, Sweden
Clinical Immunology and Transfusion Medicine, Office of Medical Services, Region Skåne, Lund, Sweden
Jessica Spiers
Department of Haematology, University College Hospitals London, London, United Kingdom
Jonathan S. Stamler
Harrington Discovery Institute and Institute of Transforma­tive Molecular Medicine, University Hospitals Cleveland Medical Center and Case Western Reserve University, Cleveland Ohio, United States
Marilyn J. Telen
Department of Medicine, Division of Hematology and Duke Comprehensive Sickle Cell Center, Duke University Medical Center, Durham, North Carolina, United States
Louise Tilley
International Blood Group Reference Laboratory, NHS Blood and Transplant, Bristol, United Kingdom
Amy M. Trottier
Department of Medicine, Division of Hematology, QEII Health Sciences Centre, Dalhousie University, Halifax, NS, Canada
David Wald
Department of Pathology, Case Western Reserve University, Cleveland, Ohio, United States
Ambroise Wonkam
Department of Genetic Medicine, McKusick- Nathans Institute, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States
Udit Yadav
Division of Hematology, Mayo Clinic, Phoenix, Arizona, United States
Departments of Pharmacology and Medicine, University of Toronto, Toronto, ON, Canada
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Foreword
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Across the many therapeutic domains of medicine, one field stands out as a pioneer in understanding molecular mecha­nisms of disease and taking this information forward to deliver highly effective therapies for these conditions. This field is hematology, and this 5th edition of Molecular Hematology highlights the substantial progress made in the field that has defined the molecular basis of many hemato­logical diseases but also developed novel approaches to therapy that have then gone on to be used as platforms across a range of other disorders. It is for these reasons that this book is considered particularly important because it describes how hematology has become a pathfinder for molecular medicine in general and has pioneered the appli­cation of a range of tools for both disease characterization and treatment that are now increasingly used across the whole of medicine.
One obvious question is this: ‘Why has hematology been so successful and led so many fields of medicine in its ability to interrogate pathogenesis and develop therapies?’ It has had the significant advantage of being able to bridge the clinic and the laboratory, giving it an immediate advantage as medicine began to shift from bedside subject to one that was strongly underpinned by the strength of laboratory science. This has allowed it to move quickly to capitalize on advances in genetics, cell biology, immunology, and cell therapy mov­ing quickly from laboratory to patients. Another key advan­tage the field has had is that the cellular framework of clinical hematology is much more readily accessible than the cells and tissues in most other organ systems. The obvious extreme is neuroscience where access to tissue for scientific evaluation is difficult– if not impossible– and the same is broadly true about many other organ systems. Hematology has the benefit that, with a single venipuncture, one accesses a wide range of different cellular components and even access to the bone marrow is relatively readily achieved. These must be crucial reasons why the field has succeeded so quickly.
In disease pathogenesis, hematology has been the first to utilize many of the molecular tools as cell biology and genetics to better understand the causation of these disor­ders. Itwas the characterization of single gene disorders in
conditions such as thalassemia, sickle cell disease, and hemo­philia that led the way in terms of our understanding of the role of individual genetic determinants in mediating a wide range of these disorders. In some cases, these genetic elements had been selected for an evolutionary advantage, often due to pressure from disorders such as malaria but, in any event, they are classical paradigms for those studying the genetics of single gene disorders. Similarly, our understanding of hematologic malignancies led to insights into disease mecha­nisms responsible for malignant transformation, again often driven by genetics such as the translocation of Bcr- Abl that led to the genesis of chronic myeloid leukemia or the JAK mutations that have underpinned polycythemia rubra vera. A wide range of these genetic abnormalities have now been defined in a large number of leukemias and lympho­mas, and this has underpinned a much better understanding of the taxonomy of these diseases such that they are much better understood mechanistically than diseases are in many other settings.
A clear understanding of the cellular and molecular basis of many of these diseases has also led to remarkable success in developing novel approaches to therapy that have proved highly effective in many of these disorders. In hematological malignancies, for example, the initial benefits of chemother­apy for the treatment of ALL set the stage for an era of chem­otherapeutic intervention across a wide range of cancers. Similarly, disorders such as Hodgkin lymphoma were amongst the first to yield to the effects of modern radiother­apy, again pioneering therapeutic interventions that would ultimately be used across many diseases. These interventions gave way to more targeted therapies. Tyrosine kinase inhibi­tors, in particular, proved enormously successful in treating diseases like chronic myeloid leukemia, while drugs that affect growth factors such as ibrutinib have also been success­ful across a wide range of hematological cancers. Monoclonal antibodies, as a first form of immune- mediated therapy, have also had considerable success in treating these disorders. The anti- CD20 antibody Rituximab ushered in the era of biologi­cal therapies and was eventually followed by multiple other antibody therapies. However, the field has moved on further
xiv Foreword
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to other forms of immune therapy and has been the starting place for a whole new set of therapeutic modalities using modified cells such as CAR T cells to treat many disorders. Another dramatic advance occurring in hematological disease well before it has been applied in other settings has been the use of hematopoietic stem and progenitor cells. Bone marrow transplantation and mobilized blood cell transplantation have had a wide set of applications in hema­tology, such that these approaches are now in routine use for a variety of different conditions, including aplastic anemias and a range of lymphomas and leukemias where a bone marrow or mobilized blood cell transplant helps provide the definitive therapy. In most other therapeutic areas, the role of hematopoietic stem and progenitor cells is still being developed, but hematopoietic cell therapy has clearly led the way in therapeutic terms.
Hematology has also had the benefit of being one of the therapeutic areas that has begun to benefit from a whole new type of therapeutic modality, nucleic acid­The ability to manipulate genetic material with antisense oligonucleotides or with DNA editing technology presages a whole new revolution in medicine and one where we are likely to see the benefits first in hematological disorders. The recent approval of a gene editing- based medicine for beta thalassemia and sickle cell disease shows how hematology will continue to lead the way in genetic therapies.
Therefore, it is easy to be persuaded that, across all the fields of medicine, molecular hematology has been a crucial pioneering field that set the standards for many others to follow. The success is also extremely impactful for the patients who have suffered from these diseases. Many formsof leukemia are now treatable with very high levels ofsuccess. Similarly, lymphomas are in many cases curable with currentinterventions, and we are now seeing the begin­nings of a new revolution in genetic therapies that are likely
based therapies.
to contribute to the cures of a range of different genetic hematological disorders.
The success of molecular hematology in the clinical setting also reflects the substantial progress in understand­ing the molecular events that underpin the molecular and genetic basis of cellular function. The advances in these domains have been dramatic over the past 40 years, and this has led to significant insights into fundamental cell biology as well as cellular pathology. However, there is much more that we do not completely understand. The role of additional DNA modification such as epigenetics still needs to be fully unraveled, while the precise biology that under­pins phenomena such as cellular aging, somatic mutation, and phenomena such as clonal hematopoiesis has yet to be properly understood. It is clear, however, that many of these phenomena seen in hematological settings will also continue to have a major impact across the breadth of medicine.
This volume, therefore, plays a crucial part in our understanding of the pathology and therapeutic opportuni­ties that underpin hematological disorders. It comprehen­sively covers all the clinical syndromes and the tools used for molecular characterization of the diseases and their thera­pies. It is also a key primer for those trying to understand disease in other settings. Its broad coverage of many aspects of molecular hematology all have relevance and importance to the whole of medicine and insights derived from the blood have led to very considerable benefits to patients suffering from multiple diseases around the world. It is no wonder that Hippocrates chose blood as one of the key 4humors in humans and that it is the only humor that stood the test of time.
Sir John Bell FRS GBE CH
Regius Professor of Medicine
Oxford University
Preface
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Advances in hematology have been substantial in the four years since the fourth edition of Molecular Hematology was published. Gene therapy and gene editing have become embedded in clinical practice, and implementation of CAR- T cell technology has resulted in dramatic improvements in patient outcomes in several hematologic neoplasms. Such progress in basic science and therapeutics has improved the diagnosis and care of patients who have a wide range of hematologic disorders.
Given the great level of innovation, for this edition we have a new hemato- oncology editor, Professor Hillard M. Lazarus from the Division of Hematology- Oncology, Case Western Reserve University, Cleveland, Ohio, USA. Hillard has overhauled the hemato- oncology chapters of the book, bringing in many new expert authors covering malignant hematologic disease.
Around one- third of the book comprises completely new chapters written by world- renowned experts. Many of the original authors have continued to support the book, for which we are immensely grateful, and they have revised and updated their individual chapters, bringing them fully up- to­date with modern practice.
There are also many new illustrations, updated Reading Lists, and the whole book now reflects contemporary hema­tology practice.
We firmly believe that a solid understanding of the molec­ular basis of these disorders aids in diagnosis and treatment of blood diseases. This volume provides sufficient back­ground information for the practicing clinician and for the clinical scientists working in this field.
We are proud of this edition, and we owe great thanks to the Wiley team who have helped us achieve our goal. In particular, we thank Harini Arumugam, Managing Editor; Sophie Bradwell, Associate Editor; and Ella Elliott, Editorial Assistant, as well as all the Wiley team for their patience and guidance throughout the entire process.
We very much hope you enjoy the fifth edition and, as always, we welcome any comments or suggestions from readers, which we will attempt to incorporate into the next edition.
Drew Provan (a.b.provan@qmul.ac.uk)
Hillard M. Lazarus (hillard.lazarus@case.edu)
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Chapter1
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Beginnings: themolecular
pathology ofhemoglobin
Douglas Higgs and Mohsin Badat
The Laboratory of Gene Regulation MRC Weatherall Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Headington, Oxford OX3 9DS, UK
Introduction, 1 Normal structure and function of hemoglobin and the globin genes, 2 Molecular pathology of the globin genes, 7
Introduction
The study of hemoglobin and its disorders (hemoglobinopa­thies) is inextricably linked to the development of molecular medicine in general. Prominent among these disorders are the thalassemias. With ~60 000 births of seriously affected individuals per year, thalassemias are among the most com­mon group of monogenic disorders worldwide. They are caused by reduced production of the α- and β- globin chains that form the essential tetrameric oxygen- carrying molecule hemoglobin (α2β2). The major hemoglobinopathies, α thalas- semia, β thalassemia, and sickle cell disease, were first recog­nized as independent clinical entities throughout the last century. Linus Pauling first used the term “molecular dis­ease” in 1949, after the discovery that the protein structure of sickle cell hemoglobin differed from that of normal hemo­globin. Indeed, it was this seminal observation that led to the concept of “molecular medicine,” the description of disease mechanisms at the molecular level. However, until the devel­opment of recombinant DNA technology, starting in the mid- 1970s, knowledge of genome structure and regulation was based on microscopy and analysis of the structure and function of proteins. However, as soon as it became possible to isolate and study human genes directly, the picture changed dramatically.
The globin genes provided the first examples of how mam­malian genes are regulated. This was mainly because eryth­roid cells could be easily purified from the peripheral blood and the earliest erythroid cells released into the circulation (reticulocytes) contained abundant (>90%) amounts of α­and β- globin messenger RNA. Following the discovery of RNA- dependent reverse transcriptase (by Howard Temin and David Baltimore), it became possible to radioactively label DNA transcripts derived from highly enriched globin RNA isolated from reticulocytes and use this to probe and
The pathophysiology and clinical phenotypes of thalassemia, 12 Conclusion, 16 Further reading, 16
analyze DNA and RNA from normal individuals and those with the well­various hemoglobinopathies. Subsequently, as the ability of molecular biology to address all aspects of genetics and gene expression has advanced apace, many of the key insights into mammalian gene regulation in health and disease have been first established by studying the globin genes. These advances include the discovery of mammalian enhancers, promoters, and insulators; the discovery of splicing in mammals; the identification of termination of transcription and processing of RNA by polyadenylation. Importantly, the globin genes pioneered the idea of regulation of gene expression by long­range enhancers. The globin genes were also used to estab­lish many of the principles by which mammalian mRNA is translated. By the late 1970s, these new discoveries paved the way for the application of molecular biology to perform a prenatal diagnosis to enable genetic counseling and prevent serious genetic diseases such as the most severe forms of thalassemia. Today, the most recent attempts to cure genetic diseases by gene therapy and gene editing are also being pioneered by the globin field.
By 2003, the first draft of the three billion bases com­prising the entire human genome was announced. Together with exponential increases in the different techniques avail­able to analyze the genome, the epigenome, the transcrip­tome, and the proteome, it has become possible to examine in detail virtually any gene in health and disease. Again, the hemoglobinopathies have first illustrated how co­of mutations in the transcriptional, epigenetic, and prot­eomic landscape can explain the different penetrance of the hemoglobinopathies in individuals with identical muta­tions in the globin genes. For example, we now know of variants in several non- globin genes which can change the phenotype of a severe hemoglobinopathy into a relatively mild condition. In summary, understanding how the globin
defined clinical and biochemical features of the
inheritance
Molecular Hematology, Fifth Edition. Edited by Drew Provan and Hillard M. Lazarus. © 2024 John Wiley & Sons Ltd. Published 2024 by John Wiley & Sons Ltd.
2 Molecular Hematology
31 32 99100
(C)
(A)
β Chains
100
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genes are normally regulated and how this is perturbed in the hemoglobinopathies provides a sound basis for under­standing the principles underlying molecular medicine in general.
Normal structure andfunction ofhemoglobin andthe globin genes
The structure andfunction ofhemoglobin
The hemoglobin molecule is a tetramer consisting of two α- like and two β- like globin chains. The varying oxygen requirements during embryonic, fetal, and adult life are reflected in the synthesis of different hemoglobin tetramers
ζ
2ε2
Yolk sac
50
40
30
20
ε
ζ
10
Percentage total globin
0
06
Chromosome 11
ζ
2ε2
Hb Gower 1
Chromosome 16
α
2γ2
Fetal liver
α
β
12
18 24 30 36 1 6 12 18 24 30 36 42 48
Prenatal age (weeks) Birth Postnatal age (weeks)
12345
β-LCR
ζ2γ
2
Hb Portland
Embryo
R1NPRL3 R2 R3
α
2ε2
Hb Gower 2
α
2γ2
Hb F
Fetus Adult
R4
MCS R1-4
α
Bone marrow
γγγε
α
2β2
Hb A
ζ
at each stage of human development (Figure1.1A). However, they all have the same general structure, consisting of two different pairs of globin chains, each attached to one heme molecule (Figure1.1B). Adult and fetal hemoglobins have α chains combined with β chains (Hb A, α2β2), δ chains (Hb A2, α2δ2), and γ chains (Hb F, α2γ2). In embryos, α- like chains called ζ chains combine with γ chains to produce Hb Portland (ζ2γ2), or with ε chains to make Hb Gower 1 (ζ2ε2), while α and ε chains form Hb Gower 2 (α2ε2). Fetal hemoglobin is heterogeneous; there are two varieties of γ chain that differ only in their amino acid composition at position 136, which may be occupied by either glycine or alanine; γ chains con­taining glycine at this position are called Gγ chains, those with alanine Aγ chains (Figure1.1C).
(B)
2β2
α
2δ2
Hb A
δ
2
α2α
β
1
β
2
α
2
α Chains
(D)
100
90 80 70 60 50 40 30 20 10
Oxyhemoglobin (% Saturation)
Left shift
temperature
2,3-DPG
+
[H
]
CO
0 10 20 30 40 50
pO
Right shift
(↓ afnity)temperature2,3-DPG
+
]
[H
60 70 80 90
(mmHg)
2
β
1
Iron
Heme
α
1
Figure1.1 (A) Globin production at the α- and β- globin loci during gestation and postnatal life. ζ- and ε- Globin are the first chains to be expressed during primitive erythropoiesis in the yolk sac, followed soon after by α- and γ- globin at approximately eight weeks’ gestation. β- globin is expressed at low levels antenatally, but switches with γ- globin at zero to six months postnatally. (B) The hemoglobin tetramer comprised of two pairs of α- and β- globin chains, each with a prosthetic heme molecule. (C) Schematic of the α- and β- globin chain loci showing the genes and their cognate enhancers. The genes at the α- globin locus are located downstream of four enhancers (MCS 1- 4), of which MCS- 2 is the most significant. MCS 1- 3lie within the introns of the gene NPRL3. The β- globin- like genes are similarly located downstream of five regulatory elements LCR 1- 5. The various hemoglobin products and their globin chain compositions are shown between the loci. (D) The oxygen dissociation curve of adult hemoglobin with modifying factors.