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NOCARDIOSIS
A large necrotic pulmonary abscess due to nocardiosis is shown with central necrosis , hemorrhage , and relatively spared residual lung.
TERMINOLOGY
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
Definitions
Nocardia from Edmund Nocard (French veterinarian)
ETIOLOGY/PATHOGENESIS
Infectious Agents
Nocardia species
Nocardia asteroides and Nocardia brasiliensis are most common isolates from human disease
Gram-variable or weakly gram-positive filamentous bacteria that is acid-fast (Kinyoun or Fite-Faraco)
Hosts who are infected with symptomatic disease are usually immunosuppressed
CLINICAL ISSUES
Presentation
Pulmonary disease
Fever, cough, night sweats, and chest pain
Neurological disease
Neurological focal deficits
Headache, seizures, behavioral changes
Disseminated nocardiosis
Fever with multiple organ involvement (e.g., brain, lungs)
Rare presentations
Endocarditis
Keratitis
Endophthalmitis
Sporotrichosis-like lymphangitis
Cellulitis
Mycetoma
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Laboratory Tests
Testing that supports iatrogenic, acquired, or congenital immunosuppression
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Acid-fast stain of a tissue section from an abscess demonstrates positive filamentous bacteria consistent with Nocardia species. Culture or molecular tests are required for definitive speciation.
Treatment
Surgical drainage of lesions may speed treatment and recovery
Prolonged antibiotic therapy (up to 6 months) with sulfonamides or trimethoprim/sulfamethoxazole
Prognosis
Neurological involvement: 80% mortality
Other sites: 50% mortality
IMAGE FINDINGS
Radiographic Findings
Lungs with infiltrates with central necrosis (cavitation)
Brain with abscesses or subtle meningitis
MICROBIOLOGY
Bacterial Characteristics
Closely related to Rhodococcus species
Most species contain virulence factor, cord factor (trehalose-6-6’-dimycolate)
Molecular characterization by 16S rRNA accurate classifies species in parallel with antibiotic and biochemical testing
Culture
Grow as strict aerobes on a wide range of media and temperatures (3 days to several weeks for growth)
Identification by 1st determining antibiotic resistance to gentamicin, tobramycin, amikacin, and erythromycin
Followed by determination of reaction to acetamide, adonitol, inositol, citrate, and colony pigment on Mueller-Hinton agar
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Etiology
Nocardia asteroides and Nocardia brasiliensis are most common isolates from human disease
Clinical Issues
Pulmonary disease
Fever, cough, night sweats, and chest pain
Neurological disease
Neurological focal deficits
Disseminated nocardiosis
Fever with multiple organ involvement (e.g., brain, lungs)
Microscopic Pathology
Necrotic abscess with neutrophils, neutrophil debris, and liquefactive necrosis may be found in any affected site
MACROSCOPIC FEATURES
Abscess Formation
Grossly, large abscesses may be found in affected organs containing necrotic, liquefactive material
MICROSCOPIC PATHOLOGY
NOCARDIOSIS
Key Facts
Organisms are not visible on routine H&E and lesions may be paucibacillary
Ancillary Tests
Organisms are easily visualized on silver stains and Gram stains (gram variable)
Modified acid-fast stain (Kinyoun or Fite-Faraco) will stain organisms red
Top Differential Diagnoses
Actinomycosis
Negative on acid-fast stains and much less commonly cause disseminated disease
Candidiasis
Very thin hyphal forms of Candida may be confused with Nocardia but will not be acid-fast and should have yeast forms present
Patients with isolated pulmonary nocardiosis and a unrelated brain lesion (e.g., toxoplasmosis) may mimic disseminated nocardiosis
Pathologic Interpretation Pearls
Presence of branched filamentous forms on Gram or silver stains should prompt confirmation with appropriate AFB stain &/or culture
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
Histologic Features
Necrotic abscess with neutrophils, neutrophil debris, and liquefactive necrosis may be found in any affected site
Organisms are not visible on routine H&E, and lesions may be paucibacillary
ANCILLARY TESTS
Histochemistry
Organisms are easily visualized on silver stains and Gram stains (gram variable)
Modified acid-fast stain (Kinyoun or Fite-Faraco) will stain organisms red
DIFFERENTIAL DIAGNOSIS
Actinomycosis
Negative on acid-fast stains and much less commonly cause disseminated disease
Candidiasis
Very thin hyphal forms of Candida may be confused with Nocardia but will not be acid-fast and should have yeast forms present
DIAGNOSTIC CHECKLIST
Clinically Relevant Pathologic Features
Immunosuppression leads to disseminated syndromes involving lung/brain
SELECTED REFERENCES
1. Yu X et al: Nocardia infection in kidney transplant recipients: case report and analysis of 66 published cases. Transpl Infect Dis. 13(4):385-91, 2011
2. Sundaram C et al: Pathogenesis and pathology of brain abscess. Indian J Pathol Microbiol. 49(3):317-26, 2006
3. Yildiz O et al: Actinomycoses and Nocardia pulmonary infections. Curr Opin Pulm Med. 12(3):228-34, 2006
4. Mootsikapun P et al: Nocardiosis in Srinagarind Hospital, Thailand: review of 70 cases from 1996-2001. Int J Infect Dis. 9(3):154-8, 2005
5. Corti ME et al: Nocardiosis: a review. Int J Infect Dis. 7(4):243-50, 2003
6. Pruitt AA: Nervous system infections in patients with cancer. Neurol Clin. 21(1):193-219, 2003
7. Kiska DL et al: Identification of medically relevant Nocardia species with an abbreviated battery of tests. J Clin Microbiol. 40(4):1346-51, 2002
8. Sridhar MS et al: Ocular nocardia infections with special emphasis on the cornea. Surv Ophthalmol. 45(5):361-78, 2001
9. Salinas-Carmona MC: Nocardia brasiliensis: from microbe to human and experimental infections. Microbes Infect. 2(11):1373-81, 2000
10. Threlkeld SC et al: Update on management of patients with Nocardia infection. Curr Clin Top Infect Dis. 17:1-23, 1997
11. Lerner PI: Nocardiosis. Clin Infect Dis. 22(6):891-903; quiz 904-5, 1996
12. Welsh O et al: Treatment of eumycetoma and actinomycetoma. Curr Top Med Mycol. 6:47-71, 1995
13. Heffner JE: Pleuropulmonary manifestations of actinomycosis and nocardiosis. Semin Respir Infect. 3(4):352-61, 1988
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Gross Features
(Left) Multifocal areas of abscess formation are shown in pulmonary nocardiosis. (Right) Abscess
and subcapsular inflammation of the kidney are shown from a disseminated case of nocardiosis.
(Left) A large cavitary abscess is shown from pulmonary
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
nocardiosis with satellite areas of small abscesses formed in adjacent lung tissue . (Right) A cross section of brain at autopsy demonstrates multiple large abscesses , which showed nocardiosis consistent with disseminated disease.
NOCARDIOSIS
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(Left) A solitary abscess in the basal ganglia due to nocardiosis is shown at autopsy on brain section. The differential diagnosis includes other bacterial abscess, toxoplasmosis, and metastatic cancer. (Right) Pus is found on the base of the brain in a case of central nervous system nocardiosis. Meningitis is less common than solitary abscess.
Microscopic Features
p
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
NOCARDIOSIS
(Left) A typical section of an abscess from a case of nocardiosis demonstrates diffuse neutrophilic infiltrate with necrosis and cellular debris. (Right) High magnification of a typical abscess section from a
atient with nocardiosis demonstrates diffuse neutrophilic infiltrate with cellular debris .
(Left) An example of Nocardia on Gram stain shows the organisms to be gram-negative filamentous bacteria. The differential diagnosis includes Actinomyces and other gram-negative filamentous or "rods in chains" bacteria. (Right) High magnification of a Gram stain from a patient with Nocardia shows gram­variable forms, which are thin and filamentous but lack spores. An acid-fast stain can confirm the diagnosis.
(Left) A PAS stain will often highlight the filamentous bacteria of nocardiosis but cannot distinguish it from actinomycosis. (Right) A silver stain is the best tool for screening a tissue section for any type of bacteria, including Nocardia species as seen here.
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SPIROCHETOSIS
Intestinal biopsy demonstrates purple adherent spirochetes to the brush border consistent with spirochetosis.
TERMINOLOGY
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
Abbreviations
Intestinal spirochetosis (IS)
Definitions
Greek: "Spira" (spiral) + "khaite" (long hair)
Greek: "Brachys" (short) + "spira" (spiral)
ETIOLOGY/PATHOGENESIS
Infectious Agents
2 members of the Brachyspiraceae family may colonize humans
Brachyspira aalborgi and Brachyspira pilosicoli
Highly debated whether Brachyspira are human pathogens or commensals
B. pilosicoli cause diarrheal illness in animals
CLINICAL ISSUES
Epidemiology
Histologic prevalence of 2-16% in western countries
Higher prevalence of 20-62% in HIV patients and men who have sex with men (MSM)
No correlation between prevalence and immune status/CD4 count
Some hypothesize IS could be a sexually transmitted disease
Higher but variable prevalence in developing countries
Site
May affect any region of colon, including rectum and appendix
Presentation
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Most healthy adults with histologic evidence of colonization are asymptomatic
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An immunohistochemical stain for spirochetes (cross reacts with Syphillis, Borrelia, and Spirochetosis) highlights the organisms at the brush border in spirochetosis.
Vague abdominal pain and chronic diarrhea
In children: Nausea, weight loss, failure to thrive
Treatment
Drugs
Antibiotics: Penicillin benzathine, metronidazole
Antidiarrheals
Prognosis
Variable: Complete resolution to continued chronic diarrhea
Some reports suggest outcome after therapy is independent of histologic resolution
MICROBIOLOGY
Characteristics
Fastidious anaerobic spirochetes with slender tapered ends
B. aalborgi: 2-6 m in length, 0.2 m in diameter
B. pilosicoli: 4-20 m in length, 0.2-0.5 m in diameter
Culture
Although organisms can be cultured, not part of routine diagnosis
MACROSCOPIC FEATURES
Endoscopic Findings
Typically normal colonic mucosa
Rare reports of mucosal erosion, edema, erythema, polypoid appearance
MICROSCOPIC PATHOLOGY
Histologic Features
Basophilic, fringed layer of organisms (3-6 m thick)
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SPIROCHETOSIS
Etiology
Brachyspira aalborgi and Brachyspira pilosicoli
Clinical Issues
Highest prevalence in HIV patients, MSM, and in developing countries
Associated with chronic diarrhea and abdominal pain
Children, HIV patients, and MSM are more likely to be symptomatic
Most healthy adult carriers are asymptomatic
Present along luminal surface of epithelium
Organisms have a corkscrew or spirillar appearance
Spirochetes do not invade mucosa
Cytologic Features
Corkscrew or spirillar bacterial forms
ANCILLARY TESTS
Histochemistry
Positive for silver impregnation stains: Warthin-Starry, Dieterle, Steiner
Positive for Alcian blue (pH 2.5) and periodic acid­Schiff stains
Negative for tissue Gram stain
Immunohistochemistry
Antispirochetal antibodies (also stain Treponema and Borrelia) will be strongly positive
DIFFERENTIAL DIAGNOSIS
Prominent Luminal Glycocalyx
Negative for silver impregnation stains
Enteroadherent Escherichia coli Infection
Gram-negative, silver-positive, noncurvy (straight) rods
Bacilli (not spirillar in form)
Key Facts
Endoscopic Findings
Usually normal colonic mucosa
Microscopic Pathology
Basophilic, fringed layer of organisms on luminal aspect of colonic epithelium
Do not invade colonic mucosa
Ancillary Tests
Positive for silver impregnation stains
DIAGNOSTIC CHECKLIST
Clinically Relevant Pathologic Features
Biopsies should be taken in at-risk populations even if colonic mucosa is normal
Pathologic Interpretation Pearls
Histologic evidence of colonization may not correlate with symptoms
SELECTED REFERENCES
1. Tsinganou E et al: Human intestinal spirochetosis--a
2. Ena J et al: Intestinal spirochetosis as a cause of chronic
3. Calderaro A et al: Infective colitis associated with human
4. Esteve M et al: Intestinal spirochetosis and chronic watery
5. Koteish A et al: Colonic spirochetosis in children and
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
review. Ger Med Sci. 8:Doc01, 2010
diarrhoea in patients with HIV infection: case report and review of the literature. Int J STD AIDS. 20(11):803-5, 2009
intestinal spirochetosis. J Gastroenterol Hepatol. 2007 Nov;22(11):1772-9. Erratum in: J Gastroenterol Hepatol. 22(11):2049, 2007
diarrhea: clinical and histological response to treatment and long-term follow up. J Gastroenterol Hepatol. 21(8):1326-33, 2006
adults. Am J Clin Pathol. 120(6):828-32, 2003
MICROSCOPIC FEATURES
(Left) Medium-power view of an intestinal biopsy is shown in a patient with spirochetosis where organisms are adherent to the brush border. (Center) High-power view of an intestinal biopsy is shown in a patient with spirochetes
shown in a patient with spirochetosis where organisms
are adherent to the brush border. Note the unaffected area .
. (Right) High-power view of an intestinal biopsy is
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WHIPPLE DISEASE
Innumerable nodular white-yellow plaques are present on the duodenal mucosal surface in this patient with Whipple disease. (Courtesy F. Mitros, MD and A. Bellizzi, MD.)
TERMINOLOGY
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
Synonyms
Tropheryma whipplei infection
Definitions
Greek: "Trophe" (food) + "eruma" (barrier)
From George Hoyt Whipple (1st described)
ETIOLOGY/PATHOGENESIS
Environmental Exposure
Infecting organism is more common in soil, animals, and farmers
Infectious Agents
T. whipplei
Ubiquitous organism that can be isolated from gastrointestinal tract, stool, oral cavity, and saliva of healthy persons (10-30%)
Genetic Predisposition
Extremely rare condition (1 case per million annually)
> 85% of affected individuals are male (USA study)
Apparent increased rate in Caucasians
CLINICAL ISSUES
Presentation
Chronic systemic infection affecting gastrointestinal tract, joints, and central nervous system, usually in middle age (~ 55 years)
Weight loss, hypoalbuminemia, diarrhea (steatorrhea), arthralgias, anemia in > 80% of patients
Lymphadenopathy, abdominal pain, skin
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pigmentation, fever, neurological signs (headaches and cognitive changes) in < 50% of patients
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Hematoxylin & eosin section shows villi distended by a macrophage infiltrate, with admixed neutrophils and fat droplets . (From DP: Gastrointestinal.)
Isolated endocarditis cause by T. whipplei
May affect native heart valves or implants
Slowly progressive disease with signs of heart failure without fever
Other presentations (without gastrointestinal involvement)
Fever and cough
Pneumonia
Isolated gastroenteritis in children
May be associated with immunosuppression
After start of therapy, immune reconstitution syndrome (IRIS) (system-wide reaction to bacteria) can occur
Endoscopic Findings
Pale yellow duodenal mucosa
Dilatation of villi and ectatic lymphatics of mucosa
Laboratory Tests
Diagnostic PCR may be performed on cerebrospinal fluid, joint fluid, saliva, or stool using 16S rRNA
Treatment
Doxycycline and hydroxychloroquine for 1 year followed by lifelong doxycycline is recommended therapy
For CNS treatment, intravenous drugs are required
For IRIS, supportive therapy (corticosteroids, cytokines) is required in addition to antibiotics
Prognosis
Without antibiotic therapy, 100% mortality (CNS involvement)
MICROBIOLOGY
Bacterial Characteristics
Gram-positive actinobacteria
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Etiology
Tropheryma whipplei
Ubiquitous organism found in healthy persons (10-30%)
Affects gastrointestinal tract, heart valves, central nervous system, and joints
Extremely rare condition (1 case per million annually) with genetic predisposition
Clinical Issues
Multisystem chronic infection in middle age (~ 55 years)
Microscopic Pathology
Dense collections of foamy macrophages within mucosa of small bowel is classic
WHIPPLE DISEASE
Key Facts
Loss of microvilli, lymphatic obstruction, and deposits of lipid in tissues
In sites outside of gastrointestinal tract, macrophages containing organisms are found in variable numbers
Ancillary Tests
Strongly PAS positive (with diastase) within macrophages
Negative for AFB staining
Top Differential Diagnoses
Mycobacterium avium-intracellulare complex infection
Histoplasmosis
Histiocytosis
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
Culture
Not routinely available in microbiology labs
MICROSCOPIC PATHOLOGY
Histologic Features
Dense collections of foamy macrophages within mucosa of small bowel is classic
In minimal disease, macrophages may be scattered and special stains difficult to interpret
Liver, esophagus, stomach, and colon have been documented with diseases in some cases
In chronic disease of liver, granulomas may be
seen without organisms
Loss of microvilli, lymphatic obstruction, and deposits of lipid in tissues
In sites outside of gastrointestinal tract, macrophages containing organisms are found in variable numbers
Suspected cases should always be confirmed with 2nd testing modality (PCR, IHC, FISH)
ANCILLARY TESTS
Histochemistry
Organisms are strongly PAS positive (with diastase) within macrophages, giving characteristic diagnostic appearance
Also positive on Gram stain, silver stains, and Giemsa stain
Can be followed after treatment to determine response to therapy
Organisms should be negative for AFB staining
Immunohistochemistry
Anti-T. whipplei antibodies confirm presence of bacteria in tissue samples
In Situ Hybridization
Confirms infection (vs. contamination) in tissue sections using RNA targets
PCR
Confirms presence of DNA in tissue sections using DNA targets (16S rRNA) but requires secondary confirmation (IHC, FISH)
Electron Microscopy
Bacteria with trilaminar cell wall structure
DIFFERENTIAL DIAGNOSIS
Mycobacterium avium-intracellulare
Complex Infection
Dense collections of macrophages in any part of gastrointestinal tract (usually small bowel) that are AFB positive
Histoplasmosis
Granulomas are more common, and organisms within macrophages have halo (PAS and silver positive)
Histiocytosis
Lack of PAS(+) staining in collections of histiocytes
DIAGNOSTIC CHECKLIST
Clinically Relevant Pathologic Features
Systemic disease (symptoms) that may or may not have gastrointestinal involvement
Pathologic Interpretation Pearls
PAS with diastase demonstrates positive collections of macrophages that are AFB negative
SELECTED REFERENCES
1. Detlefsen S et al: Histiocytic disorders of the gastrointestinal tract. Hum Pathol. 44(5):683-96, 2013
2. Moos V et al: Changing paradigms in Whipple’s disease and infection with Tropheryma whipplei. Eur J Clin Microbiol Infect Dis. 30(10):1151-8, 2011
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Microscopic Features
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(Left) Hematoxylin & eosin section shows that the epithelium overlying the villi is vacuolated with an admixed neutrophilic infiltrate. (From DP: Gastrointestinal.) (Right) Light microscopy section shows that the macrophages,
acked with the Whipple
bacillus, are strongly PAS
ositive. Note the admixed fat droplets. (From DP: Gastrointestinal.)
(Left) Numerous histiocytes with abundant foamy
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
cytoplasm and loosely formed granulomas are admixed with other inflammatory cells. (From DP: Lymphomas.) (Right) The foamy histiocytes contain abundant intracytoplasmic amphophilic material with a bluish hue. (From DP: Lymphomas.)
WHIPPLE DISEASE
(Left) The foamy histiocytes contain abundant intracytoplasmic diastase­resistant periodic acidSchiff (DPAS)positive material, consistent with undigested Tropheryma whipplei bacilli and remnants. (From DP: Lymphomas.) (Right) Gomori methenamine silver stain shows that the Tropheryma whipplei bacilli cell walls are also positive. (From DP: Lymphomas.)
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WHIPPLE DISEASE
Radiology, Microscopic, and Special Stains
Bacterial Infections: Morphological Diagnosis of Bacterial Infections
(Left) Contrast-enhanced T1­weighted MR shows typical hypothalamic enhancement
in a patient with CNS
Whipple disease. (From DP: Neuro.) (Right) Stereotypical features of CNS Whipple disease include loose aggregates of histiocytes, lymphocytes, and plasma cells, all with surrounding reactive astrocytosis . When only focal, organism­filled macrophages may be inconspicuous. (From DP: Neuro.)
(Left) A grayish tinge is helpful when suspecting that the cytoplasm of macrophages are filled with organisms rather than generic phagocytized debris. Organisms are so numerous that they cannot be individually resolved. (From DP: Neuro.) (Right) Bacteria of Whipple disease are positive on Grocott methenamine silver (GMS) stains. In part, they simulate fungi, but lack yeast or hyphal shapes. They are also too small, even smaller than histoplasma. (From DP: Neuro.)
(Left) High-power view of a PAS-stained section of CNS Whipple disease shows the intensely fuchsia­colored cytoplasmic clumps of bacteria. These dense, sickle-shaped inclusions obscure detail, and only in areas of lesser density are individual bacteria resolved
. (From DP: Neuro.)
(Right) Immunostaining for the bacteria Tropheryma whipplei is a definitive diagnostic test. (From DP: Neuro.)
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