
KAPLAN_USMLE_STEP_1_LECTURE_NOTES_2018_BIOCHEMISTRY_and_GENETICS
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Part I ● Biochemistry |
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Dihydrofolate |
Dihydrofolate |
1-carbon |
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unit |
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reductase |
reductase |
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Active folate |
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Folate |
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Dihydrofolate |
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Tetrahydrofolate |
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• Formyl THF |
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Purines |
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(DHF) |
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(THF) |
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• Methenyl THF |
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thymidine |
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• Methylene THF |
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Methionine |
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Homocysteine methyl transferase |
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Reduced folate |
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DNA and RNA |
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B12 |
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• Methyl THF |
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cell division |
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Homocysteine |
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Figure I-17-4. Folate Metabolism |
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Cobalamin |
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High-Yield |
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The vitamin cobalamin (vitamin B12) is reduced and activated in the body to 2 forms: adenosylcobalamin (used by methylmalonyl-CoA mutase) and methylcobalamin (formed from N5-methyl-THF in the N-methyl THF-homocysteine methyltransferase reaction). These are the only 2 enzymes which use B12 (other than the enzymes that reduce and add an adenosyl group to it).
Cobalamin deficiency can result in the following:
•Secondary deficiency of active THF, by preventing its release from the storage pool through the N-methyl THF-homocysteine methyltransferase reaction (thus also results in megaloblastic anemia)
•Progressive peripheral neuropathy
•Pernicious anemia (most likely reason), a failure to absorb vitamin B12 in the absence of intrinsic factor from parietal cells
•B12 absorption also decreases with aging and in individuals with chronic pancreatitis.
•B12 absorption can also decrease (less commonly) with a long-term, completely vegetarian diet (plants don’t contain B12) or infection with Diphyllobothrium latum, a parasite found in raw fish (excess B12 is stored in the body, so deficiencies develop slowly)
Treating a cobalamin deficiency with folate corrects the megaloblastic anemia but does not halt the neuropathy.
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Chapter 17 ● Amino Acid Metabolism
•Ferritin itself oxidizes Fe2+ to Fe3+ for storage of normal amounts of Fe3+ in tissues. Loss of iron from the body is accomplished by bleeding and shedding epithelial cells of the mucosa and skin. The body has no mechanism for excreting iron, so controlling its absorption into the mucosal cells is crucial. No other nutrient is regulated in this manner.
•Hemosiderin binds excess Fe3+ to prevent escape of free Fe3+ into the blood, where it is toxic.
Dietary Fe3+ |
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Vitamin C |
Ferritin (Fe3+) |
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Transferrin |
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Ferritin (Fe3+) |
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Fe2+ |
Fe2+ |
Fe2+ |
Fe3+ |
Fe2+ |
Many enzymes |
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Mucosa |
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and |
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Most tissues |
cytochromes |
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Bone |
Transferrin RES cells |
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Erythropoiesis |
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Fe2+ |
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= Transferrin receptor |
Hb |
RBC turnover |
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RBC |
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Figure I-17-6. Iron Metabolism |
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BILIRUBIN METABOLISM
Subsequent to lysis of older erythrocytes in the spleen, heme released from hemoglobin is converted to bilirubin in the histiocytes.
•Bilirubin is not water-soluble and is therefore transported in the blood attached to serum albumin.
•Hepatocytes conjugate bilirubin with glucuronic acid, increasing its water solubility.
•Conjugated bilirubin is secreted into the bile.
•Intestinal bacteria convert conjugated bilirubin into urobilinogen.
•A portion of the urobilinogen is further converted to bile pigments (stercobilin) and excreted in the feces, producing their characteristic red-brown color. Bile duct obstruction results in clay-colored stools.
•Some of the urobilinogen is converted to urobilin (yellow) and excreted in urine.
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Part I ● Biochemistry
Review Questions
Select the ONE best answer.
1.Which enzymes are responsible for producing the direct donors of nitrogen into the pathway producing urea?
A.Arginase and argininosuccinate lyase
B.Xanthine oxidase and guanine deaminase
C.Glutamate dehydrogenase and glutaminase
D.Argininosuccinate synthetase and ornithine transcarbamoylase
E.Aspartate aminotransferase and carbamoyl phosphate synthetase
2.Two days after a full-term normal delivery, a neonate begins to hyperventilate, develops hypothermia and cerebral edema, and becomes comatose. Urinalysis reveals high levels of glutamine and orotic acid. BUN is below normal. Which enzyme is most likely to be deficient in this child?
A.Cytoplasmic glutaminase
B.Cytoplasmic carbamoyl phosphate synthetase
C.Cytoplasmic orotidylate decarboxylase
D.Mitochondrial carbamoyl phosphate synthetase
E.Mitochondrial ornithine transcarbamoylase
Items 3 and 4
A 49-year-old man with a rare recessive condition is at high risk for deep vein thrombosis and stroke and has had replacement of ectopic lenses. He has a normal hematocrit and no evidence of megaloblastic anemia.
3.A mutation in the gene encoding which of the following is most likely to cause this disease?
A.Cystathionine synthase
B.Homocysteine methyltransferase
C.Fibrillin
D.Lysyl oxidase
E.Branched chain α-ketoacid dehydrogenase
4.Amino acid analysis of this patient’s plasma would most likely reveal an abnormally elevated level of
A.lysine
B.leucine
C.methionine
D.ornithine
E.cysteine
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Chapter 17 ● Amino Acid Metabolism
5.A 56-year-old man with a history of genetic disease undergoes hip replacement surgery for arthritis. During the operation the surgeon notes a dark pigmentation (ochronosis) in the cartilage. His ochronotic arthritis is most likely caused by oxidation and polymerization of excess tissue
A.homogentisic acid
B.orotic acid
C.methylmalonic acid
D.uric acid
E.ascorbic acid
Items 6–8
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Valine |
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Propionyl-CoA |
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Isoleucine |
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C. |
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F. |
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Methylmalonyl-CoA |
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Glutamate |
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B. |
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G. |
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H. |
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Succinate |
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Isocitrate |
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Maleylacetoacetate |
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D. |
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Homogentisate |
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Malate |
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Acetyl-CoA |
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Tyrosine |
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A. |
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E. |
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Pyruvate |
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Phenylalanine |
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I. |
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Alanine |
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For each of the conditions below, link the missing substrate or enzyme.
6.A 9-week-old boy, healthy at birth, begins to develop symptoms of ketoacidosis, vomiting, lethargy, seizures and hypertonia. Urine has characteristic odor of maple syrup.
7.A child with white-blond hair, blue eyes, and pale complexion is on a special diet in which one of the essential amino acids is severely restricted. He has been told to avoid foods artificially sweetened with aspartame.
8.A chronically ill patient on long-term (home) parenteral nutrition develops metabolic acidosis, a grayish pallor, scaly dermatitis, and alopecia (hair loss). These symptoms subside upon addition of the B vitamin biotin to the alimentation fluid.
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