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ФБТ БИ 2курс / куряча

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E число 1e-10

Gen ID XP_001566923.1

Query 51 DKGISHAKAGRYSEAVVMLEQVYDADAFDVEVALHLGIAYVKTGAVDRGTELLERSIADA 110

++ AK G Y EAV D+ + V + G A K G + E R++

Sbjct 552 NRAYCFAKLGYYDEAVADYTAALKIDSDNSNVYHNRGAALAKLGKLRAAVEDFNRALKRD 611

Query 111 PDNIKVATVLGLTYVQVQKYDLAVPLL---VKVAEANPVNFNVRFRLGVALDNLGRFDEA 167

P GL Y Q+Q+YD AV +++ + NP + R G N+G + A

Sbjct 612 PKLAFSLNARGLVYDQLQQYDRAVADFTEAIRLDKRNPTWLHNR---GHTYRNMGELELA 668

Query 168 IDSFKIALGLRPNEGKVHRAIAYSYEQMGSHEEALPHFKKANELDERSAV 217

I + A+ + P+ + + AY+ ++G +E A+ + KA L+E+ V

Sbjct 669 IADYSAAIKMAPHGHTTYSSRAYALRKLGRYEAAIEDYTKA--LNEQPGV 716

Region 550..612

/region_name="TPR_11"

/note="TPR repeat; pfam13414"

/db_xref="CDD:205592"

?

pfam13414: TPR_11 

TPR repeat

mamB

E число 3e-09

Gen ID XP_001564258.1

Query 122 ASVTVIVNELMYRYQICVGNENNSPAIIANAWDNRSDAISSAAVMVGVIASVIGFPIADT 181

A+ +V+ EL++++ VG S ++ANA+ +R+DA S ++GV V+G P D

Sbjct 240 AAGSVVCKELLFQWTRRVGLRAGSRVVLANAYHHRADAWSGGVALIGVAGQVMGLPGVDG 299

Query 182 IAAIGVSALVGRIGLELIGKAVHGLMD 208

A + VS + ++G + AV D

Sbjct 300 FAGLAVSLSICKMGYGIFKDAVLEFFD 326

Region <228..>326

/region_name="Cation_efflux"

/note="Cation efflux family; cl00316"

/db_xref="CDD:213092"

Cation efflux family

Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells.

mamO

0.027

XP_001562128.2

Query 49 DEDDYFRGSDDMSVGQFLVRNVAMPDVQRLYYTVPPAVVGVGGGGVNAGPVASGAIVGAN 108

D D Y + +D G MP V++++ T PP V +G G NA + S + +

Sbjct 364 DRDFYLKKKNDKEHG-------GMP-VKKVFNTAPPTVEKLGSGPKNANYLFSEEELSSP 415

Query 109 GYVITTLHSVANV 121

+ H NV

Sbjct 416 RERANSQHRKRNV 428

Region 1380..1616

/region_name="RT_nLTR_like"

/note="RT_nLTR: Non-LTR (long terminal repeat)

retrotransposon and non-LTR retrovirus reverse

transcriptase (RT). This subfamily contains both non-LTR

retrotransposons and non-LTR retrovirus RTs. RTs catalyze

the conversion of single-stranded RNA into...; cd01650"

/db_xref="CDD:73156"

RT_nLTR: Non-LTR (long terminal repeat) retrotransposon and non-LTR retrovirus reverse transcriptase (RT). This subfamily contains both non-LTR retrotransposons and non-LTR retrovirus RTs. RTs catalyze the conversion of single-stranded RNA into double-stranded DNA for integration into host chromosomes. RT is a multifunctional enzyme with RNA-directed DNA polymerase, DNA directed DNA polymerase and ribonuclease hybrid (RNase H) activities.

mamE

0.007

XP_001565845.2

Query 262 VSRGIISAKRKTMVIEGMTHSNLLQTDAAINQGNSGGPL 300

VSR +IS ++KT + MT S DAA+ Q SG PL

Sbjct 965 VSRSLISGRKKTCELHAMTVSFEELRDAAVVQSQSGAPL 1003

mamN

0.018

XP_001567413.1

Query 231 LIIFFITVIGLVLAGPLKVRPGWIAFVAGLTALALGRFKDEEFFSACGGSDILFFGGL-F 289

L I F +V+ L++ G L V G + + GL + +LG+F E+ G + L G L F

Sbjct 415 LFIAFSSVLELLVTGHLVVDFGIVFCIVGLCSGSLGQFVFMEYIKG-HGLNYLIIGSLAF 473

Query 290 VMVGALTSVG 299

V+ G+L S+G

Sbjct 474 VLGGSLVSLG 483

mamM

7e-07

XP_001564258.1

Query 17 GLAVSTVLMVMKAFVGLIGGSQAMLADAMYSLKDMLNALMVIIGTTISSKPL-DAEHPYG 75

G A + V K ++G GGS A+LAD +SL D+L ++ ++S K L P G

Sbjct 57 GGATNVFFCVTKLWIGSAGGSVALLADGFHSLTDILADIISYAAISLSRKRLPRCRFPLG 116

Query 76 HGKVEFILSMVVSVVFIVLTGYLLVHAVQILLDE 109

G++E +++V+ + LL+ +++ E

Sbjct 117 IGRLETSGAVIVAAILFFGGVALLIQSLEQCFSE 150

Region 63..>193

/region_name="Cation_efflux"

/note="Cation efflux family; pfam01545"

/db_xref="CDD:201849"

Cation efflux family

Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells.

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