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Файл:Bioinformatics_lectures / lecture6.pptx
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- •PROTEINS
- •All proteins functions are dependent on their structure, which, in turn, depends on
- •Proteins have traditionally being studied individually.
- •THE GENBANK® DATABASE
- •THE RCSB/PDB DATABASE
- •PROTEIN 3D STRUCTURE
- •BIOBLENDER
- •BIOBLENDER
- •VISUAL MOLECULAR DYNAMICS
- •VISUAL MOLECULAR DYNAMICS
- •JMOL
- •JMOL
- •PYMOL
- •PYMOL
- •RASMOL
- •UCSF CHIMERA
- •UCSF CHIMERA
- •FRIEND
- •FRIEND
- •VISPROT3DS
- •VISPROT3DS
- •POLYVIEW3D
- •STATISTICS OF POLYVIEW3D
- •SWISSPDBVIEWER
- •SWISSPDBVIEWER
- •OTHERS
- •THANK YOU

VISPROT3DS

POLYVIEW3D
http://polyview.cchmc.org/polyview3d.html
A web server and good point to start with if you don't like to install any software on your computer.

STATISTICS OF POLYVIEW3D

SWISSPDBVIEWER
http://spdbv.vitalit.ch/
SwissPdbViewer (aka DeepView) is an application that provides a user friendly interface allowing to analyze several proteins at the same time.
The proteins can be superimposed in order to deduce structural alignments and compare their active sites or any other relevant parts. Amino acid mutations, Hbonds, angles and distances between atoms are easy to obtain thanks to the intuitive graphic and menu interface.

SWISSPDBVIEWER
Building Crystallographic Symmetries

OTHERS
There are also many others products that can be used.
Making research in this field can be a good way to fin a new information

THANK YOU
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