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C. catenulata (see Diutina catenulata) 101–102
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C. colliculosa (see Torulaspora
delbrueckii) 256–257
C. dubliniensis 44, 50–51
C. duobushaemulonis 52
C. fabianii (see Cyberlindnera fabianii) 96–97
C. famata (see Debaryomyces hansenii) 99–100
C. glabrata 44, 51–52
C. guilliermondii (see Meyerozyma
guilliermondii) 158–159
C. haemuloni/haemulonis 52–53
C. inconspicua 54
C. kefyr (see Kluyveromyces marxianus) 134–135
C. krusei (see Pichia kudriavzevii) 205–206
C. lipolytica (see Yarrowia lipolytica) 299–300
C. lusitaniae (see Clavispora lusitaniae) 70–71
C. metapsilosis 55
C. nivariensis 50, 56
C. norvegensis (see Pichia norvegensis) 206–207
C. orthopsilosis 57–58
C. parapsilosis 44, 58–59
C. pelliculosa (see Wickerhamomyces
anomalus) 297–298
C. pseudotropicalis (see Kluyveromyces
marxianus) 134–135
C. rugosa (see Diutina rugosa) 102–103
C. tropicalis 44, 59–60
candidaemia 50, 54, 59, 256, 297, 299
candidiasis 46, 51, 59, 70, 134, 206
capsules 81
caspofungin xxiv
cat pathogens 22, 160, 164, 294
catenulate conidia xvii
acropetal xviii, 5, 66, 67, 69
basipetal xviii, xix, 246
catheter-related infections 102, 151, 229, 297
cattle pathogens
abortion 168, 223
ringworm 279
CDBT (creatinine dextrose bromothymol blue thymine)
agar 85, 305
cellotape flag preparations 303
central nervous system infections 65, 109, 190, 221,
239, 294
meningitis 114
cerebrospinal fluid, slide preparation 81, 302
Cerinosterus cyanescens (see Quambalaria
cyanescens) 218–219
CGB (canavanine glycine bromothymol blue)
agar 83, 306
Chaetomium 61–62
chlamydospores xxi
Candida 45
Cylindrocarpon 98
Epidermophyton 108
Fusarium xxi, 125
Microsporum 163
Paecilomyces 189
Trichophyton 262, 267, 271, 281, 282
Chlorazol Black 302
chromoblastomycosis 65, 66, 116, 201
chromogenic media 44, 48, 50
Chrysosporium 63
C. tropicum 63–64
Cladophialophora 65
C. bantiana 65–66
C. carrionii 65, 66–67
Cladosporium 68–69
C. bantianum (see Cladophialophora bantiana)
65–66
C. carrionii (see Cladophialophora carrionii) 65,
66–67
C. trichoides (see Cladophialophora
bantiana) 65–66
C. werneckii (see Hortaea werneckii) 132–133
classification xi–xii
Clavispora lusitaniae 70–71
cleistothecia
Aphanoascus 7
Aspergillus 29
Scedosporium 242, 243
Coccidioides immitis/posadasii xx, 72–74
coenocytic hyphae xiii
Colletotrichum coccodes xxii, 75–76
columellae xvii, 139, 224, 228
Mucor xvii, 171, 172
conidia xvii–xxii
Conidiobolus coronatus 77–78
Coniochaeta 79
C. hoffmannii 79–80
continuous ambulatory peritoneal dialysis (CAPD) 33,
206, 229, 237, 283
corneal infections
keratitis 1, 5, 24, 33, 75, 79, 114, 118, 188, 196,
296
ulcers 121, 136
cornmeal agars 306
cryptococcosis 81, 83
Cryptococcus 81–82
C. albidus/diffluens (see Naganishia
albida) 177–178
C. gattii 82–84, 302, 306
C. neoformans 81, 82, 84–85, 302, 305, 306
C. neoformans var. grubii 84
C. neoformans var. neoformans 84
C. laurentii (see Papiliotrema laurentii) 190–191
culture characteristics xv
Acrophialophora 3
Alternaria 5
Aphanoascus 7
Apophysomyces 13
Arthroderma 16, 17
Arthrographis 19
Aspergillus 21, 22, 24, 25, 26, 28, 29, 31, 32
346 Index
Aureobasidium 34
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Basidiobolus 36
Blastomyces 40
Candida 43
Chrysosporium 64
Cladophialophora 66, 67
Cladosporium 69
Coccidioides 73
Colletotrichum 75
Conidiobolus 78
Coniochaeta 80
Cryptococcus 81, 82
Cylindrocarpon 98
Epicoccum 106
Epidermophyton 108
Exophiala 113
Fusarium 119, 120, 121
Histoplasma 131
Hortaea 133
Lichtheimia 139
Lomentospora 143
Lophophyton 145
Madurella 147
Malassezia 152
Marquandomyces 157
Microsphaeropsis 161
Microsporum 163, 164, 165, 166, 167
Mortierella 169
Mucor 172
Nannizzia 179, 181, 182, 183
Onychocola 187
Paecilomyces 188
Paraphyton 195
Penicillium 196
Phaeoacremonium 199
Pleurostoma 209
Quambalaria 219
Rhinocladiella 220
Rhizopus 226
Rhodotorula 230
Saksenaea 235
Sarocladium 237
Scedosporium 240, 241, 243
Schizophyllum 245
Sporothrix 249
Talaromyces 255
Trichophyton xvi, 262, 263, 265, 266, 269, 270,
272, 273, 274, 276, 277, 278, 280, 282
Trichosporon 284, 286
Veronaea 293
Verruconis 294
culture media
BCP agar 163, 305
bird seed agar 81, 83, 85, 305
CDBT agar 85, 305
CGB agar 83, 306
chromogenic 44, 48, 50
cornmeal agar 306
cornmeal glucose sucrose yeast extract agar 306
Czapek dox agar 306
lactritmel agar 307
lipid-containing 151
Littman oxgall agar 307
malt extract agar 307
modified Dixon’s agar 151, 306
1% peptone agar 307
potato dextrose agar 163, 308
rice grains
Sabouraud’s dextrose agar 151, 308
tap water agar 309
Trichophyton confirmatory tests 261, 305, 307, 309
urea agar slopes 309
vitamin free agar 309
culture slide preparation 303–304
Cunninghamella bertholletiae xvii, 86–87
Curvularia xix, 39, 88
C. australiensis 88–89
C. hawaiiensis 89–90
C. lunata 90
C. spicifera 91
Cutaneotrichosporon 92
C. cutaneum 92–93
C. dermatis 93
C. jirovecii 94
C. mucoides 95
Cyberlindnera fabianii 96–97
Cylindrocarpon 98
Czapek dox agar 306
Dalmau plate culture 44, 45
databases, molecular xxii
Fusarium 118, 119
Debaryomyces delbrueckii (see Torulaspora delbrueckii)
Debaryomyces hansenii 99–100
dermatophytosis see tinea (ringworm)
diarrhoea, infant 205
dictyoconidia (multi-celled) xviii, 5, 106, 251, 291
didymoconidia (two-celled) xviii
Dipodascus geotrichum (see Geotrichum candidum)
disjunctor cells 73
Diutina 101
D. catenulata 101–102
D. rugosa 102–103
dog pathogens 22, 151, 164, 294
dolipores xv
Doratomyces xxi
Drechslera 104
ear infections 24, 30, 196, 239
Emergomyces 105
162–163, 308
256–257
xx, 126–127
Index 347
endocarditis 51, 79, 109, 148, 196, 201, 283
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endophthalmitis 79, 283
endosporulation 72, 74
Entomophthora coronata (see Conidiobolus
coronatus) 77–78
entomophthoromycosis 35
Epicoccum nigrum 106
Epidermophyton floccosum xx, 107–108
Exophiala xx, 109
E. dermatitidis 109–110
E. jeanselmei 110–111
E. nishimurae 110
E. oligosperma 110, 112
E. spinifera 112–113
E. werneckii (see Hortaea werneckii) 132–133
E. xenobiotica 110, 112
Exserohilum rostratum 114–115
eye infections 239
corneal ulcers 121, 136
endophthalmitis 79, 283
keratitis 1, 5, 24, 33, 75, 79, 114, 118, 188, 196, 296
‘favic chandeliers’ 276
favus
fowl 144
human 275
mouse 275
fermentation tests
Candida 45, 46, 48, 49, 50, 52, 53, 54, 55, 56, 57,
58, 60
Clavispora 70
Cyberlindnera 96
Debaryomyces 99
Diutina 101
Geotrichium 126
Kluyveromyces 134
Lodderomyces 140
Meyerozyma 158
Pichia 205, 206
Saccharomyces 232
Torulaspora 256
Wickerhamomyces 297
Filobasidiella bacillispora (see Cryptococcus
gattii) 82–84, 302, 306
Filobasidiella neoformans (see Cryptococcus
neoformans) 81, 82, 84–85, 302, 305, 306
fluorescence microscopy 301
Fonsecaea 116–117
fowl favus 144
Fusarium xxi, 118–119
F. chlamydosporum 120
F. dimerum 121
F. fujikuroi 119, 122
F. incarnatum-equiseti 122
F. oxysporum 118, 119, 123–124
F. solani 118, 124–125
Galactomyces candidus (see Geotrichum candidum) xx,
126–127
gastrointestinal infections 35, 205
genetic identification xxii–xxiii
Geotrichum
G. candidum xx, 126–127
G. capitatum (see Magnusiomyces
capitatus) 148–149
G. clavatum (see Magnusiomyces
clavatus) 149–150
germ tube test 44, 45
Gibberella fujikuroi (see Fusarium fujikuroi) 119, 122
Gliocladium 128
glossary 311–319
‘Golden Tongue’ syndrome 175
Graphium xxi, 129
growth media see culture media
growth reactions
Apiotrichum 10, 11
Candida 45, 46, 48, 49, 50–51, 52, 53, 54, 55, 56,
57, 59, 60
Clavispora 70
Cryptococcus 84, 85
Cutaneotrichosporon 93, 94, 95
Cyberlindnera 96
Debaryomyces 99
Diutina 101, 102
Geotrichium 126
Kluyveromyces 134
Lodderomyces 140
Magnusiomyces 149, 150
Meyerozyma 158
Naganishia 177
Papiliotrema 190
Pichia 205, 207
Rhodotorula 229, 231
Saccharomyces 232
Torulaspora 256
Trichosporon 284, 285, 286, 287
Wickerhamomyces 297
Yarrowia 299
hair perforation test 268, 307
heart infections (endocarditis) 51, 79, 109, 148, 196,
201, 283
hedgehogs 264
Hendersonula toruloidea (see Neoscytalidium
dimidiatum) 184–185
histopathology
Aspergillus xiv
Blastomyces dermatitidis 41
Coccidioides immitis 72, 74
Cryptococcus 81
Emergomyces 105
Lichtheimia 139
Paracoccidioides brasiliensis/lutzii 193
348 Index
pityriasis versicolor 152
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Pneumocystis jirovecii 210
Talaromyces marneffei 254, 255
Trematosphaeria grisea 258
Histoplasma capsulatum 130–131
HIV-positive patients 50, 105, 177, 210
horse pathogens 130, 165, 263
Hortaea werneckii 132–133
Hülle cells 29
Humicola xxi
hyalohyphomycosis 118, 188, 246
hyphal clamp connections xii, xv
hyphal morphology xii–xv
antler-like 276
bamboo 167
nodular bodies 264, 269
reflexive branching 277
septate xii, xiv, xv, 161
spiral 267, 271
stains 301
India ink mounts 81, 302
Issatchenkia orientalis (see Pichia
kudriavzevii) 205–206
Keratinomyces ajelloi (see Arthroderma
uncinatum) 16–17
keratitis 1, 5, 24, 33, 75, 79, 118, 188, 196, 296
Kluyveromyces marxianus 134–135
lactophenol cotton blue (LPCB) 302
lactritmel agar 307
Lasiodiplodia theobromae 136–137
Lecythophora hoffmannii (see Coniochaeta
hoffmannii) 79–80
Lichtheimia corymbifera xvii, 138–139
Littman oxgall agar 307
Lodderomyces elongisporus 58, 140–141
Lomentospora prolificans 142–143
Lophophyton gallinae 144–145
lung infections 24, 40, 81, 126, 130, 142, 148, 210,
218, 239
macroconidia
Arthroderma 16, 17
Cylindrocarpon 98
Epidermophyton xx, 108
Fusarium 121, 123, 125
Histoplasma 131
Lophophyton 145
Microsporum 164, 166
Nannizzia 180, 181, 182
Paraphyton 195
Trichophyton 261, 264, 265, 267, 270, 272, 275,
279, 281
Madurella
M. grisea (see Trematosphaeria grisea) 258
M. mycetomatis 146–147
Magnusiomyces 148
M. capitatus 148–149
M. clavatus 149–150
Malassezia 151–153, 306
Malbranchea pulchella 154–155
MALDI-ToF MS identification xxii, 46
malt extract agar 307
Margarinomyces hoffmannii (see Coniochaeta
hoffmannii) 79–80
Marquandomyces marquandii 156–157, 216
media see culture media
meningitis 114
merosporangia xvii, 252, 253
Meyerozyma guilliermondii 158–159
microconidia
Fusarium 123, 125
Nannizzia 183
Trichophyton 261, 264, 265, 267, 270, 272, 274,
279, 280
microscopy slide preparation 301–304
Microsphaeropsis arundinis 160–161
Microsporum 162, 308
M. audouinii 162–163
M. canis 162, 163, 164–166
M. canis var. distortum 165, 166
M. canis var. equinum 165, 166
M. cookei (see Paraphyton cookei) 194–195
M. ferrugineum 167
M. fulvum (see Nannizzia fulva) 179
M. gallinae (see Lophophyton gallinae)
144–145
M. gypseum (see Nannizzia gypsea) 180–181
M. nanum (see Nannizzia nana) 181–182, 288
M. persicolor (see Nannizzia persicolor) 183
modified Dixon’s agar 151, 306
molecular identification xxii–xxiii, 46
morphology xi–xxii
glossary 311–319
Mortierella wolfii 168–169
mouse favus 271
Mucor xvii, 170
M. amphibiorum 171
M. circinelloides 172–173
M. corymbifera (see Lichtheimia corymbifera) xvii,
138–139
M. indicus 173
M. irregularis (see Rhizomucor variabilis) 174
M. miehei (see Rhizomucor miehei) 222
M. pusillus (see Rhizomucor pusillus)
223–224
M. ramosissimus 174
mucormycosis 225
Index 349
Mucoromycota
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classification xi
morphology xii, xiii, xv
multidrug resistance 47, 92
mycetoma 1, 109, 110, 112, 146, 239, 258
Mycocladus corymbifera (see Lichtheimia
corymbifera) xvii, 138–139
mycotic keratitis 1, 5, 24, 33, 75, 79, 118, 188, 196, 296
mycotoxins 24, 196
Myrmecridium schulzeri 175–176
Naganishia albida 177–178
nail infections (onychomycosis) 1, 5, 95, 107, 118, 136,
184, 187, 246, 266
Nannizzia 179
N. cajetana (see Paraphyton cookei) 194–195
N. fulva 179
N. gypsea 180–181
N. nana 181–182, 288
N. persicolor 183
Nannizziopsis 63
Nattrassia mangiferae 184
Neosartorya fischeri (see Aspergillus fischeri) 21, 23–24
Neoscytalidium dimidiatum 184–185
neurotropic fungi 65, 109, 190, 221, 239, 294
niger seed 305
nodular bodies 264, 269
notifiable infections 47
Ochroconis 186
O. gallopava (see Verruconis gallopava) 294–295
Onychocola canadensis 187
onychomycosis (nail infections) 1, 5, 95, 107, 118, 136,
184, 187, 246, 266
otomycosis 24, 30, 196, 239
Paecilomyces
P. lilacinus (see Purpureocillium lilacinum) 156,
216–217
P. marquandii (see Marquandomyces
marquandii) 156–157, 216
P. variotii 188–189
Papiliotrema laurentii 190–191
Paracoccidioides brasiliensis/lutzii 192–193
Paraphyton cookei 194–195
parenthesomes xv
Penicillium 196–198, 306
P. marneffei (see Talaromyces marneffei) 254–255
1% peptone agar 307
perithecia 61
peritonitis 33, 79, 206, 218, 229, 237, 283
Phaeoacremonium parasiticum 199–200
Phaeoannellomyces werneckii (see Hortaea
werneckii) 132–133
phaeohyphomycosis 5, 33, 109, 110, 112, 114, 160, 208
cerebral 65
phialides xix
Acremonium 1
Acrophialophora 3
Aspergillus 26
Fusarium 123, 125
Madurella 147
Marquandomyces 157
Paecilomyces 189
Phaeoacremonium 199, 200
Phialophora xx, 202
Pleurostoma 209
Sarocladium 237
Talaromyces 255
Trichoderma 259
Phialophora xx, 201
P. hoffmannii (see Coniochaeta
hoffmannii) 79–80
P. parasiticum (see Phaeoacremonium
parasiticum) 199–200
P. richardsiae (see Pleurostoma
richardsiae) 208–209
P. spinifera (see Exophiala spinifera) 112–113
P. verrucosa 201–202
Phoma xxii, 203–204
phragmoconidia (multi-celled) xviii
phylogeny xi–xii
physiological tests see fermentation; growth reactions
Pichia
P. kudriavzevii 205–206
P.norvegensis 206–207
pig pathogens 181
Pithomyces chartarum (see Pseudopithomyces
chartarum) 214–215
pityriasis versicolor 152
Pleurostoma richardsiae 208–209
Pleurostomophora richardsiae (see Pleurostoma
richardsiae) 208–209
Pneumocystis jirovecii 210–211
potassium hydroxide (KOH) solutions 301, 302
potato dextrose agar 163, 308
Prototheca 212–213
Pseudallescheria
P. apiosperma (see Scedosporium
apiospermum) 239–241
P. boydii (see Scedosporium boydii) 242–243
pseudohyphae xv
Pseudopithomyces chartarum 214–215
pulmonary infections 24, 40, 81, 126, 130, 142, 148,
210, 218, 239
Purpureocillium lilacinum 156, 216–217
pycnidia xxii, 136, 204
pyelonephritis 51, 70
Quambalaria cyanescens 218–219
350 Index
Ramichloridium schulzeri (see Myrmecridium
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schulzeri) 175–176
reptile pathogens 63
Rhinocladiella 220
R. atrovirens 220–221
R. mackenziei 221
R. spinifera (see Exophiala spinifera) 112–113
rhinosinusitis 22, 244
Rhizomucor 222
R. miehei 222
R. pusillus 223–224
R. variabilis 174
Rhizopus 225
R. arrhizus 225–227
R. azygosporus (see R. microsporus) 227–228
R. microsporus 227–228
R. oryzae (see R. arrhizus) 225–227
Rhodotorula 229
R. glutinis 229–230
R. mucilaginosa 229, 230–231
R. rubra (see R. mucilaginosa ) 229, 230–231
rice grain media 162–163, 308
ringworm see tinea (ringworm)
risk group (RG) xxiv
RG-3 41, 65, 72, 130, 192, 221, 254
Sabouraud’s dextrose agar (SDA) 151, 308
Saccharomyces boulardii 232
Saccharomyces cerevisiae 232–233
Saksenaea 234, 306, 309
S. vasiformis 234–236
Saprochaete
S. capitata (see Magnusiomyces capitatus)
148–149
S. clavata (see Magnusiomyces clavatus) 149–150
Sarocladium 237
S. strictum 237–238
scalp infections (tinea capitis) 162, 164, 167, 180, 264,
269, 275, 276, 277, 279, 282
Scedosporium xxi, 239
S. apiospermum 239–241
S. aurantiacum 241–242
S. boydii 242–243
S. prolificans/inflatum (see Lomentospora
prolificans) 142–143
Schizophyllum commune 244–245
sclerotia xxii, 76
Scopulariopsis 246–247
Scytalidium dimidiatum/hyalinum (see Neoscytalidium
dimidiatum) 184–185
Sepedonium 248
septicaemia 51, 59, 70, 96
see also candidaemia
setae (terminal hairs) 61, 76
silkworm pathogen (B. bassiana) 37–38
sinusitis 22, 24, 79, 114, 244
skin infections 151, 249
mycetoma 1, 109, 110, 112, 146, 239, 258
ringworm see tinea (ringworm)
slide preparations 301–304
spherules 72, 74
spiral hyphae 267, 271
sporangia/sporangiophores xv
Apophysomyces
Cunninghamella xvii, 87
Lichtheimia xvii, 139
Mortierella 169
Mucor xvii, 171, 172, 172254
Rhizomucor 224
Rhizopus 226, 228
Saksenaea 235
Syncephalastrum xvii, 253
sporangiola xvii, 87
Sporothrix cyanescens (see Quambalaria
cyanescens) 218–219
Sporothrix schenckii 249–250
squash preparations 302
stains 301–302
Stemphylium 251
sympodial development of conidia xix, 38, 89, 115,
175, 250, 291, 293
Syncephalastrum racemosum xvii, 252–253
synnemata xxi, 129, 240
Talaromyces marneffei 254–255
tap water agar 309
taxonomy xi–xii
terminology 311–319
thallic conidiogenesis xix, xx
thecae 212
tinea (ringworm)
in cattle 279
fowl favus 144
in horses 165, 263
in humans 7, 107, 181, 183, 273, 279
favus 275
pityriasis versicolor 152
tinea capitis 162, 164, 167, 180, 264, 269,
tinea imbricata 261
tinea nigra 132
tinea pedis 107, 266, 273
tinea unguium (onychomycosis) 1, 5, 95, 107,
white piedra 95, 283, 285
mouse favus 271
Torulaspora delbrueckii 256–257
Torulopsis glabrata (see Candida glabrata) 44, 51–52
Torulopsis inconspicua (see Candida inconspicua) 54
toxins 24, 196
Trematosphaeria grisea 258
Trichoderma 259–260
13, 14
276, 277, 279, 282
118, 136, 184, 187, 246, 266
Index 351
Trichophyton xvi, 261
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confirmatory tests 261, 262, 263, 268, 269–271,
272, 275, 276, 279, 281, 282, 305, 307,
309
T. ajelloi (see Arthroderma uncinatum) 16–17
T. concentricum 261–262
T. equinum 263–264
T. erinacei 264–266
T. indotineae 268
T. interdigitale 266–268
T. interdigitale var. nodulare 269
T. mentagrophytes 269–271, 307, 308
T. quinckeanum 271–273
T. rubrum 273–275, 307, 308
T. schoenleinii 275–276
T. soudanense 276–277
T. terrestre (see Arthroderma terrestre) 15–16
T. tonsurans 277–279
T. verrucosum 279–281
T. violaceum 282
Trichosporon 283–284
T. asahii 283, 284–285
T. asteroides 285
T. capitatum (see Magnusiomyces
capitatus) 148–149
T. cutaneum (see Cutaneotrichosporon
cutaneum) 92–93
T. dermatis (see Cutaneotrichosporon
dermatis) 93
T. domesticum (see Apiotrichum domesticum) 9–10
T. inkin 285–286
T. jirovecii (see Cutaneotrichosporon
jirovecii) 94
T. loubieri (see Apiotrichum loubieri) 10
T. mucoides (see Cutaneotrichosporon mucoides) 95
T. mycotoxinovorans (see Apiotrichum
mycotoxinovorans) 11
T. ovoides 287
Trichothecium roseum xix, 288–289
Ulocladium 290–291
urea agar slopes 309
vaginitis 232
Veronaea botryosa 292–293
Verruconis gallopava 294–295
verrucose conidia 248
Verticillium 296
vitamin free agar (Trichophyton no. 1) 309
Wangiella dermatitidis (see Exophiala
dermatitidis) 109–110
white piedra 95, 283, 285
Wickerhamomyces anomalus 297–298
woronin bodies xiv
Xylohypha bantiana (see Cladophialophora
bantiana) 65–66
Yarrowia lipolytica 299–300
zygospores 35, 36
352 Index
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