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10 GENOMICS, HISTOPATHOLOGY, AND MOLECULAR PATHOLOGY OF SPORADIC AND HEREDITARY COLORECTAL CANCER 155
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Table 2 Histological features of serrated lesions/polyps.
Hyperplastic polyps Small polyps in distal bowel with normal architecture and proliferation. GCHP has mature
• Goblet cell-rich type (GCHP)
• Microvesicular type (MVHP)
Sessile serrated lesions (SSL) Different from hyperplastic polyps, SSLs show abnormal architectural features such as
Traditional serrated adenoma (TSA) Characterized by overall protuberant growth pattern with villiform projections,
Mixed serrated polyp Contains components from the above categories.
goblet cells in the upper crypt and harbor KRAS mutations in 50%. MVHP have enlarged micro-vacuolated columnar cells in upper crypt and harbor BRAF mutations in 70–80%.
branching of crypts, dilation of crypt base and growth of crypts parallel to muscularis
mucosa. BRAF mutations are detected in up to 90% of SSLs. Low grade dysplasia relates to a loss of mismatch repair protein function and can be
detected immunohistochemically.
characteristic ectopic crypt foci that develop orthogonally to the crypt axis and tall
columnar cells with pencillate nuclei and eosinophilic cytoplasm.
and Whitehall 2010). A classification system was proposed by Snover and colleagues, shown in Table2 (Snover etal. 2005).
While sporadic hyperplastic polyps are common and benign, sessile serrated polyposis (SSP) is a rare condition character­ized by multiple serrated polyps, some of which can be >1cm in diameter (Winawer etal. 1997). Several studies have confirmed an increased risk of CRC in patients with SSP (35–50%), sug­gesting that serrated lesions have pre-malignant potential (Chow etal. 2006; Hyman etal. 2004).
Clinical criteria were proposed by the World Health Organisation in 2019 for the diagnosis of serrated polyposis. These are in Table3:
WHO criteria for the diagnosis of sessile serrated polyposis.
Table 3
Criterion 1: > 5 serrated lesions proximal to the rectum, all being ≥
5 mm in size, with ≥ 2 being 10 mm in size
Criterion 2: > 20 serrated lesions of any size distributed throughout the
large bowel, with ≥ 5 being proximal to the rectum
Note that any histological subtype of serrated lesion is included in the
final polyp count. The polyp count is cumulative over multiple colonoscopies.
Additionally, sessile serrated lesions (SSLs) have been shown to be precursors to tumors with MSI (C. Richard Boland and Goel 2010). In the sporadic setting, conventional adenomas rarely show MSI whereas serrated polyps sometimes have MSI and loss of MLH1 expression (Iino etal. 1999).
Toyota and colleagues identified a subset of sporadic CRCs that showed high levels of CpG island methylation (both in MLH1 and in other cancer-specific genes), a group called CpG island methylator phenotype (CIMP +) (Toyota et al. 1999).
Yang and colleagues detected CIMP, in increasing order of fre­quency, in MVHP (47%), SSL (75%) and TSA (80%), indicating the sequence of events in the progression from precursor to dysplastic lesion (Yang etal. 2004). As well as being present in serrated polyps, CIMP has been identified in histologically normal mucosal biopsies, supporting the importance of a colo­rectal field in the development of serrated neoplasia (Worthley etal. 2010).
In addition to CIMP, BRAF mutations have been implicated in the vast majority of sessile serrated adenomas but almost never in conventional adenomas (Kambara etal. 2004). BRAF mutations are not prevalent in Lynch syndrome, strengthening its association with the serrated pathway rather than MSI (Yang etal. 2004). An activating mutation in BRAF (typically V600E) leads to constitutive activation of the mitogen-activated protein kinase pathway, leading to cell proliferation and survival independent of EGFR activation. BRAF appears to be mutated early in the serrated pathway as 70–76% of MVHP are BRAF­mutant, and BRAF mutations are found in aberrant crypt foci, which are the earliest histologically evident lesions in the ser­rated pathway (O’Brien etal. 2006; Rosenberg etal. 2007). More recently, a role for mutations in RNF43 in the serrated pathway has been proposed. Yan and colleagues found that 85% of MSI-H tumors with MLH1 promoter methylation had a muta­tion in RNF43, compared to only 33% of tumors without MLH1 promoter methylation (Yan etal. 2017).
Rarer Inherited Colorectal Cancer Syndromes
With the widespread use of NGS on colorectal tumors, more pathogenic variants are being associated with susceptibility to
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Summary of rare inherited colorectal cancer predisposition syndromes.
Table 4
Syndrome Genetic defect Features
Polyposis MUTYH (or MYH)-associated
polyposis (MAP)
Polymerase proofreading-
associated polyposis (PPAP)
Hamartomatous Peutz-Jehgers Syndrome (PJS) LKB1 (also called
Juvenile Polyposis Syndrome (JPS) SMAD4, BMPR1A Mucocutaneous telangiectasias, congenital cardiopulmonary defects.
Cowden disease PTEN Macrocephaly, oral, and skin papillomas. Increased risk of breast and
MYH <100 colorectal adenomas by the third decade of life.
POLE, POLD1 Multiple colorectal adenomas. Increased risk of endometrial, brain,
STK11)
CRC. While these contribute very little to the worldwide burden of CRC, these syndromes help shed more light on the molecular mechanisms that underpin colorectal tumorigen­esis. These syndromes, summarized in Table 4, are broadly classified as polyposis (including FAP or attenuated FAP, as dis­cussed before), non-polyposis (Lynch syndrome) and hamarto­matous syndromes.
Colitis Associated Cancer
An alternative route for CRC development relies on the presence of chronic inflammation. Indeed, a wealth of evidence has demonstrated that the prevalence of CRC in patients with inflammatory bowel disease (IBD) (ulcerative colitis or Crohn’s disease) is significantly increased relative to the healthy population (Ekbom etal. 1990; Winther etal. 2004). In addition to long disease duration, the severity of inflammation is a risk factor for the development of CRC in inflammatory bowel dis­ease (Gillen etal. 1994).
The underlying mechanism that promotes tumorigenesis in the context of chronic inflammation remains to be elucidated but is likely to be multifactorial. Pro-inflammatory pathways such as the NF-kB, IL-6/STAT3, COX2/PGE2 and IL-23/Th17 are likely to be involved by regulating the expression of certain inflammatory mediators and promoting a tumor-supporting environment (O’Connor etal. 2010). In contrast to sporadic CRC, the sequence of events in colitis-associated CRC appears to be different. In particular, TP53 mutations (Figure6) appear to be an early event as they are detected not only in precan­cerous lesions, but also in non-neoplastic mucosa in the con­text of chronic inflammation (Galandiuk etal. 2012; Yin etal.
1993). Furthermore, APC and KRAS mutations are less preva­lent in colitis-associated CRC, arguing the case for the selection of certain cancer-associated mutations by chronic inflamma­tion (Burmer etal. 1990; Tannin etal. 1995).
breast, ovarian, and pancreatic cancers.
GI hamartomatous polyps, mucocutaneous pigmentation. Increased risk
of pancreatic, stomach, breast, ovarian, lung, and endometrial cancer.
Increased risk of pancreas, stomach, and small bowel cancers.
thyroid cancers.
Endoscopic surveillance in patients with IBD is crucial and has been shown to reduce the incidence of colitis-associated colorectal cancer (Castaño-Milla et al. 2014). In the UK, the British Society of Gastroenterology (BSG) and Association of Coloproctology for Great Britain and Ireland (ACPGBI) have issued guidelines for CRC screening in patients with IBD (Table5) (Cairns etal. 2010; Lamb etal. 2019). All patients with ulcerative colitis or Crohn’s colitis are recommended to have a screening colonoscopy approximately 10 years after the onset of colitic symptoms. The frequency of subsequent colonoscopic surveillance is then determined by stratifying patients into low,
Table 5 Summary of BSG/ACPGBI guidelines for colonoscopic surveillance for CRC in IBD.
Low risk (offer colonoscopy at five years)
• Extensive but quiescent ulcerative colitis or
• Extensive but quiescent Crohn’s disease or
• Left-sided ulcerative colitis (but not proctitis alone) or Crohn’s colitis
of a similar extent.
Intermediate risk (offer colonoscopy at three years)
• Extensive ulcerative or Crohn’s colitis with mild active inflammation
that has been confirmed endoscopically or histologically or
• Post-inflammatory polyps or
• Family history of colorectal cancer in a first-degree relative aged 50
years or over.
High risk (offer colonoscopy at one year)
• Extensive ulcerative or Crohn’s colitis with moderate or severe active
inflammation that has been confirmed endoscopically or histologically or
• Primary sclerosing cholangitis (including after liver transplant) or
• Colonic stricture in the past five years or
• Any grade of dysplasia in the past five years or
• Family history of colorectal cancer in a first-degree relative aged
under 50 years.
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Figure6 Case of inflammatory bowel disease with high grade dysplasia characterized by nuclear atypia and loss of maturation in crypt epithelium (A). The same crypt is seen in panel B (arrow) showing abnormal loss of TP53 expression contrasting with positive nuclei in the background inflammatory cell infiltrate.
intermediate and high-risk groups based on their disease burden, family history of CRC, presence of primary sclerosing cholangi­tis and endoscopic appearance at the index colonoscopy.
Transcriptomic Classification of Colorectal Cancer
The heterogeneous nature of CRC has meant that stratification of patients into clinically actionable groups has been difficult. In an effort to integrate molecular characteristics into classification, the consensus molecular subtypes (CMS) were introduced in 2015 (Guinney etal. 2015). By making use of dif­ferences in tumor biology rather than clinical outcomes, the CMS classification attempted to capture the intrinsic molecular heterogeneity of CRC.
Four subtypes were identified (CMS1-4) based on differential gene expression of the tumor tissue (comprising both the epi­thelium and stroma). CMS1 is enriched for MSI tumors and BRAF mutations, and displays high immunogenicity. CMS2 tumors have marked Wnt and Myc activation, and these tumors display high levels of chromosomal instability. CMS3 tumors are enriched for KRAS mutations and have features of meta­bolic dysregulation. CMS4 tumors on the other hand are mes­enchymal and show activation of the TGFB pathway, with stromal invasion, angiogenesis and an immunosuppressive phenotype (Becht etal. 2016).
The CMS classification has been shown to be of prog­nostic significance. Primary CMS4 tumors have been associ­ated with worse overall survival compared with CMS1 and CMS2 cancers (ten Hoorn etal. 2021). Similarly, adjuvant chemotherapy has been shown to be more effective in CMS2 and CMS3 tumors. However, a criticism of the CMS
classification has been that it allocates a significant weight to the stromal content of the tumor, thereby masking low abun­dance epithelial transcripts. The five CRC intrinsic subtypes (CRIS) have been developed to address this (Isella et al.
2017). Increasingly, molecular profiling and patient classification into molecular subtypes are being used for treatment allocation in oncological trials. It remains to be shown whether this approach will increase the treatment effect by reducing the number of patients who do not respond to treatment.
Histopathology
Careful and accurate pathology reporting of CRC is vital because pathology reports are used not only to confirm the diagnosis, but also to provide prognostic and predictive information allowing clinicians to deliver a high standard of care for patients and appropriate management for specific clinical circumstances. The report also provides valuable audit data on the accuracy of other clinical services such as radiology, surgery, oncology and screen­ing programs. Systematic review of all original colorectal pathology reports, macroscopic images/descriptions and slides also acts to audit the quality and consistency of reporting within the pathology department and to collect accurate data for cancer registration and epidemiology, facilitate high quality research, provide education, and plan service delivery (Loughrey et al.
2018). Pathologists are therefore well placed to help establish and maintain high standards of clinical care for patients with CRC as part of a multidisciplinary team.
The specimens examined by the pathologists will be consid­ered separately, starting from the initial assessment of diag­nostic biopsies and progressing through local excisions to
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resections. This approach broadly corresponds to the order in which surgical specimens are examined as patients’ progress along the colorectal cancer pathway.
Biopsy Diagnosis of Large Bowel Adenocarcinoma
Frequently, the pathologist is required to interpret biopsies taken from polypoid, ulcerated or flat lesions which are endo­scopically suspicious of malignancy. The aim is to confirm the diagnosis of malignancy, classify the type of malignancy (including primary versus secondary) and assess tumor grade. Less frequently, biopsies taken from sites other than the colon and rectum may contain deposits of colorectal adenocarci­noma. In such cases, the pathologist is strongly aided by detailed clinical information, including appropriate radiologic imaging and may require the use of immunohistochemical stains. Depending on the biopsy appearance, a report of meta­static adenocarcinoma may be suggestive of primary colorectal malignancy.
Endoscopic biopsy confirmation of colorectal adenocarci­noma depends upon the identification of unequivocal evi­dence of invasion by tumor cells through the muscularis mucosae into the submucosa. A desmoplastic stromal reac­tion may provide a clue to the diagnosis. Biopsies entirely composed of superficial fragments of “dysplastic” epithelium with no relation to muscularis mucosae or containing only necrotic tissue are deemed inadequate and the pathologist is unable to independently verify the diagnosis of malignancy. Small biopsies from invasive tumors may also fail to accu­rately represent the true tumor grade, while areas of ulcera­tion and associated inflammation from superficial parts of the tumor may lead to the mistaken interpretation of a poorly differentiated tumor.
It has been widely recommended that all CRCs should be tested for MMR status with the purpose of detecting Lynch syndrome at the time of diagnosis. As will be discussed in more detail further on in this chapter, it is also important for clinical management and prognosis. The initial test can be MSI or MMR immunohistochemistry, depending on local circumstances. The recommendation is that MMR immuno­histochemistry should be performed on the endoscopic biopsy, assuming this contains diagnostic material, and the main reasons for this are:
 • better fixation facilitates interpretation.
 • the result is available clinically in a more timely fashion,
which is essential in the neoadjuvant pathway.
 • avoids radiotherapy-induced artefacts that can affect
interpretation.
 • patients who do not undergo surgery are tested.
Endoscopists should be encouraged to take more and larger biopsy samples from all tumors, to allow confident diagnosis and provide adequate tumor tissue for any required down­stream testing for example, for Lynch syndrome (Loughrey etal. 2018).
Local Excision Specimens
A biopsy diagnosis of adenocarcinoma may be followed by planned local excision, which may be undertaken as a curative procedure for some patients with early rectal cancer or as a palli­ative procedure in patients unsuitable for resectional surgery. Lesions may be removed by endoscopically (endoscopic mucosal resection or endoscopic submucosal dissection) or, in the case of some rectal tumors, via transanal minimally invasive surgery.
As the majority of large bowel adenocarcinomas arise from pre-existing adenomas and sessile serrated lesions, screening colonoscopy and therapeutic polypectomy has a potential to reduce CRC burden by early detection and removal of benign polyps, thus decreasing CRC incidence and mortality (Lin etal.
2021). Careful assessment and reporting of these premalignant lesions requires a standardized approach and the use of consis­tent terminology amongst pathologists, gastroenterologists, and colorectal surgeons.
Conventional colorectal adenomas are subtyped according to their histological pattern. Tubular adenomas, which are the most common subtype, show normal crypt architecture (Figure7) whereas villous adenomas are composed mainly of leaf- or finger-like projections. Tubulovillous adenomas show a mixture of both patterns (Figure 8). The grading of the dys­plasia is based mainly on the degree of architectural complexity
Figure7 Tubular adenoma (left) showing similar architecture as adjacent non-dysplastic mucosa (right).
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Figure8 Tubulovillous adenoma (A). Figure(B) is a higher magnification of the encircled area showing villiform projections.
Figure9 Tubular adenoma with low grade dysplasia (A, thin arrow) and high-grade dysplasia (A, thick arrow). Encircled area (B) shows nuclear crowding
with reduced stroma between glands, nuclear crowing, frequent mitotic figures (green arrows) and intraluminal necrosis (green star).
supplemented by cytological atypia. The use of a two-tier strat­ification of the adenomatous dysplasia into low grade and high grade is recommended as this provides a uniform system for integrating global histopathology grading data (Figure 9). Although used in the Japanese literature, in order to avoid overtreatment of lesions considered to have negligible risk of metastatic spread, the terms carcinoma in situ and intramuco­sal carcinoma are not used in Europe and the USA.
The term “advanced adenoma” encompasses a group of ade-
nomas larger than 10
mm, tubulovillous or villous architecture, and/or high-grade dysplasia. These are associated with a high risk of synchronous or metachronous adenomas, the former indicating the need for a full colonoscopy and the latter more stringent surveillance (WHO 2019).
As mentioned before, serrated lesions (SLs) and polyps are characterized by a sawtooth or stellate architecture of the epi­thelium. They are named according to their morphological
appearance as hyperplastic polyp (HP) (Figure10), sessile serrated lesion (SSL), sessile serrated lesion with dysplasia, traditional serrated adenoma (TSA) and mixed lesions (Table
2) (Bateman and Shepherd 2015). The distribution of SLs varies with the type: HPs and TSAs are usually found in the left colon, while SSLs occur more often in the proximal colon (Carr etal. 2009; Lash etal. 2010; Qazi etal. 2014). SSLs are commonly 10 mm or more, particularly the ones with dys­plasia, and show an overall distortion of the normal crypt architecture, probably resulting from alterations of the pro­liferative zone (Figure11) (Yang etal. 2015). Tiny distal HPs do not appear to be associated with significant risk of CRC development, while larger lesions with features of SSLs can be associated with the development of dysplasia and adeno­carcinoma (East etal. 2017). SSLs can show dysplasia that can be low or high grade in nature and it is believed that dys­plastic lesions are associated with faster progression to
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Figure10 (A) Microvesicular hyperplastic polyp with serrated appearance of the crypts. (B) Goblet cell-rich hyperplastic polyp.
Figure11 (A) Sessile serrated lesion with dilation extending to the base of crypts and crypt distortion. (B) Same lesion with an area of high-grade dysplasia.
adenocarcinoma than “classical” adenomas. TSAs can pre­sent as large polyps in the left colon and rectum or as flat lesions predominantly in the proximal colon. They are char­acterized by the presence of dysplasia, almost always show areas of conventional adenomas and seem to have a more rapid malignant potential.
The principles of reporting an adenocarcinoma that has devel­oped within an adenomatous lesion and has been removed by local excision are the same as in major resections. However, a number of features require special attention in local excisions of (presumed) early cancers with curative intent because they are used to determine the necessity for more radical surgery. In addition to the assessment of completeness of excision, these include the recording of parameters that predict the presence of lymph node metastatic disease in early tumors, namely tumor size, poor differentiation, the depth of invasion into the submucosa, the
presence of submucosal lymphatic or venous invasion and margin involvement (Beaton etal. 2013; Ueno etal. 2004).
Tumors that invade the muscularis propria usually require further surgery. For many years the Haggitt (1985) and Kikuchi (1995) classifications (Figure12) have been used to sub-stage the colorectal adenocarcinomas in relation to depth of invasion into submucosa in pedunculated and sessile tumors respectively. Haggitt and colleagues found that “level 4” invasion, in which the tumor extended beyond the stalk of the polyp into the submucosa but did not invade the muscu­laris propria, was an adverse factor. Neither system is always easy to use in practice, especially if there is fragmentation or suboptimal orientation of the tissue. The Kikuchi level system requires division of the submucosa into thirds and this is not possible to do accurately unless muscularis propria is included in the specimen.
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Figure12 Substaging of T1 cancer. (a) Haggitt staging of pedunculated adenocarcinoma. (b) Kikuchi staging in sessile T1 adenocarcinoma.
More recently, Ueno et al. (2004) have proposed that the absolute thickness of the invasive tumor (depth of invasion beyond the muscularis mucosae) and the width of tumor invasion provide more objective measures of potential risk of lymph node metastatic disease. At the moment, a firm rec­ommendation cannot be made based on current evidence for one method of assessing local invasion over another and whenever possible, all three approaches should be mentioned in the pathologist report to facilitate data collection for further research and for local multidisciplinary teams to select which they consider to be most appropriate to management decisions.
Intact polypectomy specimens require assessment of both the peripheral (mucosal) and deep margins. Involvement of a peripheral margin may indicate the need for repeat endoscopy and further local excision if feasible. Involvement of the deep resection margin by invasive tumor has traditionally been an indication for considering surgical intervention.
Another emerging feature, particularly for local excision specimens, is the presence of tumor budding (single tumor cells or cell clusters of up to four tumor cells). Until recently, however, the application of this biomarker in clinical practice was limited by the lack of a standardized assessment and reporting methodology. In the context of CRC, tumor bud­ding can be assessed according to the method agreed at the International Tumor Budding Consensus Conference (ITBCC) in 2016. Using the ITBCC scoring system, tumor budding is an independent predictor of lymph node metas­tasis in patients with pT1 CRC and an adverse prognostic factor that should warrant consideration of adjuvant
chemotherapy in patients with stage II colon cancer (Lugli etal. 2021). The most recent WHO classification of tumors (2019) has included this feature as an additional prognostic factor for CRC.
Tumor budding can not only be observed at the invasive tumor front (Figure 13), but also within the tumor bulk, referred to as intra-tumoral budding. Tumor budding can be observed in endoscopic biopsy specimens and their presence has been shown to be associated with advanced tumor stage assessed quantitatively (Lugli etal. 2021).
In an effort to combine the effect of depth of invasion with other prognostic factors, the ACPGBI issued a position state­ment in 2013, highlighting the role of the resection margin, degree of differentiation, tumor budding, lympho-vascular invasion, and mucinous differentiation in conferring a risk of residual disease following resection of a malignant polyp (Williams etal. 2013).
Resection Specimens
Colorectal resection specimens require careful handling and assessment if key prognostic data are to be determined reliably and accurately. The critical role of a skilled surgical technique and its effect on patient outcome (morbidity and mortality) is well established for anterior resection (AR) and abdomino­perineal excision of the rectum resection (APER) procedures in the treatment of rectal cancer. Audit of the adequacy of the surgical technique is regarded as a valuable source of feedback to colorectal surgeons, including an assessment of the resec­tion margin (R) status.
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Figure13 Tumor budding, single or small clusters of neoplastic cells infiltrating the desmoplastic stroma, seen on H&E (A) and highlighted with immunohistochemistry for Cytokeratin in (B).
Ideally, specimens should be received fresh and unopened as soon as possible after surgical resection. The colorectal specimen should be photographed and carefully examined. In rectal specimens, particular attention should be given to the macroscopic assessment of the mesorectum which should be intact, with no defect deeper than 5 mm and no coning toward the distal margin. A three-tier scoring system has been pro­posed: complete, which shows an intact mesorectum; nearly complete or intra-mesorectal; and incomplete when there is exposure of muscularis propria (Nagtegaal et al. 2002). This information predicts not only margin involvement but also local recurrence and survival. The plane of resection can also be used as a marker of the quality of surgery and continual feedback to multidisciplinary teams has led to improved quality of surgery and clinical outcomes with time (Nagtegaal et al. 2002; Quirke etal. 2009).
In addition to detailed macroscopic description which should mention tumor location and diameter, the pathology report should include information relating to the tumor type and differentiation; extent of local tumor invasion (pT stage) speci­fying if invasion in other organs or tumor perforation; resection margins; lymph node (LN) status (number present and number involved); presence of tumor deposits; intra and/or extramural venous invasion; lymphatic invasion and perineural invasion.
All of the lymph nodes that can be found in a specimen should be examined histologically as the number of lymph nodes iden­tified in resection specimens from patients with stage II and stage III colon cancer has been positively correlated with survival (Chang etal. 2007). This positive correlation is supported by the results of a recent analysis by Lal etal. (2022) using cases from The Cancer Genome Atlas (TCGA) which shows that a high LN yield predicts overall and disease-free survival. In addition, they found no association of higher LN yield and increasing nodal positivity; and a high LN yield was strongly linked to an activated immune response in tumors. Their data suggest that LN yield
may be driven by an enhanced immune response in the primary tumor making nodes easier to identify ex vivo rather than intrinsic surgical or pathologist-specific factors.
Additional prognostic factors are tumor budding, and the inflammatory infiltrate (Loughrey etal. 2018; Lugli etal. 2021). In relation to inflammatory infiltrate, the presence of intra­tumoral lymphocytes and Crohn-like reaction are associated with improved outcome (Rozek et al. 2016). Tumor deposits (satellites) are an established adverse prognostic factor in colo­rectal cancer (Nagtegaal etal. 2016) and according to TNM 8, they are defined as "discrete macroscopic or microscopic nod­ules of cancer in the pericolorectal adipose tissue’s lymph drainage area of a primary carcinoma that are discontinuous from the primary tumor and without histological evidence of residual lymph node or identifiable vascular or neural struc­tures". In the absence of lymph node metastasis in regional lymph nodes, the presence of a satellite deposits changes the tumor status to pN1c.
Regular audit of resection specimen reports should ensure that all of the relevant data is consistently and accurately recorded.
Preoperative Chemoradiotherapy-Related Changes in Surgical Specimens
Following neoadjuvant chemoradiotherapy, rectal tumors may show evidence of extensive regression with widespread necrosis and stromal fibrosis. Alterations in the appearance of the advancing front of tumor cells and a reduced lymphocytic response is also frequently seen. In some circumstances the tumor may be entirely absent from the specimen despite exten­sive sampling. Alternatively, small foci of residual tumor cells may appear isolated within the rectal wall. Lymph nodes, criti­cal for accurate pathologic staging, may be small, difficult to find and display features of necrosis.
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Table 6 Most commonly used system for assessing tumor regression grade (TRG) (Adapted from Langer and Becker 2018).
Grade Mandard AJCC 2010
TRG 0 No residual tumor cells (complete response) TRG 1 Absence of residual cancer cells Single cells or small groups of cancer cells (near complete response) TRG 2 Rare residual cancer cells scattered through the fibrosis Residual cancer cell with desmosplastic response (partial response) TRG 3 An increased in number of residual cells, but fibrosis still predominates Minimal evidence of tumor response (poor or no response) TRG 4 Residual cancer outgrowing fibrosis TRG 5 Absence of regressive changes
The response of rectal cancers to preoperative chemora­diotherapy is highly variable ranging from complete patho­logical response to no detectable effects. There is evidence that patients with completely excised rectal carcinomas, who have received neoadjuvant treatment that has resulted in complete or marked regression, have a better prognosis than those without significant regression (Hermanek etal. 2013; Maas etal. 2010). In order to allow meaningful comparisons of resected rectal tumors and to establish the prognostic value of histologic chemoradiotherapeutic change, various classification systems to assess tumor regression grade (TRG) have been proposed (Table 6). Pathologists should be encour­aged to document the TRG in all patients receiving neoadju­vant chemoradiotherapy.
The Emerging Role of Molecular Diagnostics in Colorectal Cancer
As outlined throughout this chapter, molecular tumor charac­terization has become an integral part of the multidisciplinary approach in the management of patients with CRC over the past decade. Molecular diagnostics is of dual significance. First, it allows accurate classification of the underlying pathology, which itself guides treatment options that are becoming increasingly personalized. Secondly, it may inform on the presence of underlying hereditary tumor syndromes as out­lined above, guiding surveillance and screening of relevant family members. The technological progress in molecular tumor characterization and access to large panel sequencing provide information on prognostic tumor factors and lead to the identification of targetable pathways and allow patients to access clinical trials.
MSI and mutations in BRAF and RAS are established predic­tive biomarkers in CRC (WHO classification of tumors 2019) and can be tested either by immunohistochemistry (MMR and
V600E
BRAF
In the UK, NICE recommends algorithmic testing for Lynch syndrome (NICE 2017) (Figure 14). MSI CRCs should have BRAF mutation testing and/or MLH1 promoter methylation testing to distinguish between sporadic dMMR cancers and Lynch syndrome. Absence of BRAF
) or sequencing.
V600E
mutation and/or
absent MLH1 promoter hypermethylation should prompt a rec­ommendation of referral to clinical genetics for appropriate counselling and screening of the relevant MMR genes, as should loss of PMS2, MSH2, and/or MSH6 immunohistochemical expression (Loughrey etal. 2022). BRAF-wildtype cases with MSI have a good prognosis, and regardless of BRAF status, dMMR tumors have a poorer response to 5-fluorouracil-based chemotherapy but respond to immune checkpoint blockade (Le et al. 2017). More recently, Cercek and colleagues described complete clinical responses in all cases (n = 12) of dMMR stage II or stage III locally advanced rectal cancer treated with dostar­limab, an anti-PD-1 monoclonal antibody, without the need for chemoradiotherapy or surgery (Cercek etal. 2022).
Mutations in KRAS and NRAS also have therapeutic signifi­cance. Testing for KRAS and NRAS mutations in codons 12, 13, 59, 61, 117, and 146 in CRC with metastatic disease is recom­mended as it correlates with resistance to anti-epidermal growth factor (anti-EGFR) therapy (such as cetuximab and panitumumab) (Van Cutsem E, Lenz HJ, Köhne etal. 2015). Early-stage clinical trials have shown promising results with the KRAS
G12C
specific covalent inhibitor sotorasib in KRAS
G12C
mutant CRCs (Canon etal. 2019).
It is likely that the presence of BRAF
V600E
mutation also confers resistance to anti-EGFR therapy. However, this can be rescued through triplet therapy with BRAF (encorafenib), EGFR (cetuximab) and MEK (binimetinib) inhibitors, which have been shown to increase overall survival com­pared to standard treatment (Kopetz etal. 2019). Therefore, most modern guidelines also recommend testing metastatic CRC for BRAFV
600E
mutation (Loughrey et al. 2022;
Pietrantonio etal. 2015).
A number of studies investigating other possible bio­markers in colorectal cancer are underway and other tests will inevitably emerge in the near future. For example, HER2 activation (which leads to MAPK phosphorylation and subsequent resistance to EGFR inhibition) appears to be a possible druggable target, with combination therapy of trastuzumab plus lapatinib or trastuzumab and pertuzumab (Meric-Bernstam et al. 2019; Sartore-Bianchi et al. 2016). Table 7 summarizes current and emerging biomarkers and their clinical significance.
164 2 COLORECTAL AND ANAL CANCER
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New diagnosis of CRC
Te st for mismatch repair deficiency
PCR-based MSI test
MSH1
abnormal
test
positive
MSI (MSI-L
or MSI-H)
BRAF
V600E
MSS
No further testing No further testing
IHC panel for MLH1, MSH2,
MSH6, and PMS2
MSH2, MSH6,
or PMS2
abnormal
All 4 genes
normal
negative
positive
MSH1 promoter
hypermethylation test
negative
Confirm Lynch syndrome by genetic testing of germile DNA
Figure14 Flowchart of molecular testing algorithm suggested by NICE.
Table 7 Suggested markers for routine testing and their possible significance (in addition to prognostication).
Marker Test Present and possible future significance
Microsatellite instability (MSI) PCR • PD1 blockade Mismatch repair (MMR) status IHC • Screening for Lynch syndrome
NGS • PD1 blockade
KRAS, HRAS, NRAS PCR • Resistance to anti-EGFR therapy
V600E
BRAF
PIK3CA* NGS • Aspirin as adjuvant therapy HER2* IHC
NTRK fusion* NGS • TRK inhibition MET amplification* NGS • Resistance to anti-EGFR therapy Consensus molecular subtyping* Transcriptional profiling • Targeted cetuximab (in CMS2) or bevacizumab (in CMS1)
* emerging biomarkers with current limited evidence.
NGS IHC NGS
NGS
• KRAS-specific inhibitors
• BRAF-specific inhibitors
• HER2 blockade