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Contents

Part I Basic Science Underlying Retinal Degeneration

1

Analysis of Genes Differentially Expressed During Retinal

 

 

Degeneration in Three Mouse Models . . . . . . . . . . . . . . . .

3

 

Yogita Kanan, Michael Centola, Frank Bart,

 

 

and Muayyad R. Al-Ubaidi

 

2

Regulation of Angiogenesis by Macrophages . . . . . . . . . . . .

15

 

Rajendra S. Apte

 

3

Protein Kinase C Regulates Rod Photoreceptor

 

 

Differentiation Through Modulation of STAT3 Signaling . . . . .

21

 

Carolina Pinzon-Guzman, Samuel Shaomin Zhang,

 

 

and Colin J. Barnstable

 

4Pigment Epithelium-derived Factor Receptor (PEDF-R): A Plasma Membrane-linked Phospholipase with PEDF

 

Binding Affinity . . . . . . . . . . . . . . . . . . . . . . . . . . . .

29

 

Preeti Subramanian, Patricia M. Notario,

 

 

and S. Patricia Becerra

 

5

The Function of Oligomerization-Incompetent RDS in Rods . . .

39

 

Dibyendu Chakraborty, Shannon M. Conley, Steven J.

 

 

Fliesler, and Muna I. Naash

 

6

The Association Between Telomere Length and Sensitivity

 

 

to Apoptosis of HUVEC . . . . . . . . . . . . . . . . . . . . . . . .

47

 

Ji Zhang, Chen Hui, Liu Su, Wu Xiaoyun, Huang Xi,

 

 

and Fan Yingchuan

 

7

Photoreceptor Guanylate Cyclases and cGMP

 

 

Phosphodiesterases in Zebrafish . . . . . . . . . . . . . . . . . . .

55

 

Ross F. Collery and Breandán N. Kennedy

 

8

RDS in Cones Does Not Interact with the Beta Subunit

 

 

of the Cyclic Nucleotide Gated Channel . . . . . . . . . . . . . . .

63

 

Shannon M. Conley , Xi-Qin Ding, and Muna I. Naash

 

xiii

xiv

 

Contents

9

Increased Expression of TGF-β1 and Smad 4 on

 

 

 

Oxygen-Induced Retinopathy in Neonatal Mice . . . . . . . . .

.

71

 

Fan Yingchuan, Lei Chuntao, Chen Hui, and Hu Jianbin

 

 

10

ZBED4, A Novel Retinal Protein Expressed

 

 

 

in Cones and Müller Cells . . . . . . . . . . . . . . . . . . . . .

.

79

 

Debora B. Farber, V.P. Theendakara, N.B. Akhmedov,

 

 

 

and M. Saghizadeh

 

 

11

Tubby-Like Protein 1 (Tulp1) Is Required for Normal

 

 

 

Photoreceptor Synaptic Development . . . . . . . . . . . . . . .

.

89

 

Gregory H. Grossman , Gayle J.T. Pauer, Umadevi Narendra,

 

 

 

and Stephanie A. Hagstrom

 

 

12

Growth-Associated Protein43 (GAP43) Is a Biochemical

 

 

 

Marker for the Whole Period of Fish Optic Nerve Regeneration

.

97

 

Manabu Kaneda, Mikiko Nagashima, Kazuhiro Mawatari,

 

 

 

Tomoya Nunome, Kenichiro Muramoto, Kayo Sugitani,

 

 

 

and Satoru Kato

 

 

13

Multiprotein Complexes of Retinitis Pigmentosa GTPase

 

 

 

Regulator (RPGR), a Ciliary Protein Mutated in X-Linked

 

 

 

Retinitis Pigmentosa (XLRP) . . . . . . . . . . . . . . . . . . . .

.

105

 

Carlos Murga-Zamalloa, Anand Swaroop, and Hemant Khanna

 

 

14

Misfolded Proteins and Retinal Dystrophies . . . . . . . . . . .

.

115

 

Jonathan H. Lin and Matthew M. LaVail

 

 

15Neural Retina and MerTK-Independent Apical Polarity

of αvβ5 Integrin Receptors in the Retinal Pigment Epithelium . . 123 Mallika Mallavarapu and Silvia C. Finnemann

16Mertk in Daily Retinal Phagocytosis: A History in the Making . . 133 Emeline F. Nandrot and Eric M. Dufour

17The Interphotoreceptor Retinoid Binding (IRBP) Is Essential for Normal Retinoid Processing in Cone

Photoreceptors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 141 Ryan O. Parker and Rosalie K. Crouch

18

Aseptic Injury to Epithelial Cells Alters Cell Surface

 

 

Complement Regulation in a Tissue Specific Fashion . . . . . . .

151

 

Joshua M. Thurman, Brandon Renner, Kannan

 

 

Kunchithapautham, V. Michael Holers, and Bärbel Rohrer

 

19

Role of Metalloproteases in Retinal Degeneration Induced

 

 

by Violet and Blue Light . . . . . . . . . . . . . . . . . . . . . . .

159

 

C. Sanchez-Ramos, J.A. Vega, M.E. del Valle,

 

 

A. Fernandez-Balbuena, C. Bonnin-Arias,

 

 

and J.M. Benitez-del Castillo

 

Contents

xv

20 Mitochondrial Decay and Impairment of Antioxidant

Defenses in Aging RPE Cells . . . . . . . . . . . . . . . . . . . . . 165 Yuan He and Joyce Tombran-Tink

21 Ciliary Transport of Opsin . . . . . . . . . . . . . . . . . . . . . . 185 Deepti Trivedi and David S. Williams

22Effect of Hesperidin on Expression of Inducible Nitric Oxide Synthase in Cultured Rabbit Retinal Pigment

Epithelial Cells . . . . . . . . . . . . . . . . . . . . . . . . . . . .

193

Luo Xiaoting, Zeng Xiangyun, Li Shumei, Dong Minghua,

 

and Xiong Liang

 

23 Profiling MicroRNAs Differentially Expressed

 

in Rabbit Retina . . . . . . . . . . . . . . . . . . . . . . . . . . . .

203

Naihong Yan, Ke Ma, Jia Ma, Wei Chen, Yun Wang, Guiqun

 

Cao, Dominic Man-Kit Lam, and Xuyang Liu

 

24 Unexpected Transcriptional Activity of the Human VMD2

 

Promoter in Retinal Development . . . . . . . . . . . . . . . . . .

211

Meili Zhu, Lixin Zheng, Yumi Ueki, John D. Ash,

 

and Yun-Zheng Le

 

25Microarray Analysis of Hyperoxia Stressed Mouse Retina: Differential Gene Expression in the Inferior and Superior

Region . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

217

Yuan Zhu , Riccardo Natoli, Krisztina Valter, and Jonathan Stone

 

26Photoreceptor Sensory Cilia and Inherited Retinal Degeneration . 223 Qin Liu , Qi Zhang, and Eric A. Pierce

27Role of Elovl4 Protein in the Biosynthesis

of Docosahexaenoic Acid . . . . . . . . . . . . . . . . . . . . . . . 233 Martin-Paul Agbaga , Richard S. Brush, Md Nawajes A.

Mandal, Michael H. Elliott, Muayyad R. Al-Ubaidi, and Robert E. Anderson

Part II Molecular Genetics and Candidate Genes

28Molecular Pathogenesis of Achromatopsia Associated with Mutations in the Cone Cyclic Nucleotide-Gated

Channel CNGA3 Subunit . . . . . . . . . . . . . . . . . . . . . . . 245 Xi-Qin Ding, J. Browning Fitzgerald, Alexander B.

Quiambao, Cynthia S. Harry, and Anna P. Malykhina

29 Mutation Spectra in Autosomal Dominant and Recessive

Retinitis Pigmentosa in Northern Sweden . . . . . . . . . . . . . . 255 Irina Golovleva, Linda Köhn, Marie Burstedt, Stephen

Daiger, and Ola Sandgren

xvi

 

Contents

30

1 Rhodopsin Mutations in Congenital Night Blindness . . .

. . . 263

 

Suzanne D. McAlear, Timothy W. Kraft, and Alecia K. Gross

 

31

GCAP1 Mutations Associated with Autosomal Dominant

 

 

Cone Dystrophy . . . . . . . . . . . . . . . . . . . . . . . . .

. . . 273

 

Li Jiang and Wolfgang Baehr

 

32

Genotypic Analysis of X-linked Retinoschisis

 

 

in Western Australia . . . . . . . . . . . . . . . . . . . . . .

. . . 283

 

Tina Lamey, Sarina Laurin, Enid Chelva, and John De Roach

 

33

Mutation Frequency of IMPDH1 Gene of Han Population

 

 

in Ganzhou City . . . . . . . . . . . . . . . . . . . . . . . . .

. . . 293

 

Li Shumei, Luo Xiaoting, Zeng Xiangyun, Hu Liqun,

 

 

Xiong Liang, and Li Sisi

 

Part III Diagnostic, Clinical, Cytopathological and Physiologic Aspects of Retinal Degeneration

34

Reversible and Size-Selective Opening of the Inner

 

 

Blood-Retina Barrier: A Novel Therapeutic Strategy . . . . . . .

301

 

Matthew Campbell, Anh Thi Hong Nguyen, Anna-Sophia

 

 

Kiang, Lawrence Tam, Paul F. Kenna, Sorcha Ni

 

 

Dhubhghaill, Marian Humphries, G. Jane Farrar,

 

 

and Peter Humphries

 

35

Spectral Domain Optical Coherence Tomography

 

 

and Adaptive Optics: Imaging Photoreceptor Layer

 

 

Morphology to Interpret Preclinical Phenotypes . . . . . . . . . .

309

 

Jungtae Rha, Adam M. Dubis, Melissa Wagner-Schuman,

 

 

Diane M. Tait, Pooja Godara, Brett Schroeder, Kimberly

 

 

Stepien, and Joseph Carroll

 

36

Pharmacological Manipulation of Rhodopsin Retinitis

 

 

Pigmentosa . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

317

 

Hugo F. Mendes, Raffaella Zaccarini, and Michael E. Cheetham

 

37

Targeted High-Throughput DNA Sequencing

 

 

for Gene Discovery in Retinitis Pigmentosa . . . . . . . . . . . . .

325

 

Stephen P. Daiger, Lori S. Sullivan, Sara J. Bowne,

 

 

David G. Birch, John R. Heckenlively, Eric A. Pierce,

 

 

and George M. Weinstock

 

38

Advances in Imaging of Stargardt Disease . . . . . . . . . . . . .

333

 

Y. Chen, A. Roorda, and J. L. Duncan

 

Contents

xvii

39Protamine Sulfate Downregulates Vascular Endothelial Growth Factor (VEGF) Expression and Inhibits VEGF

and Its Receptor Binding in Vitro . . . . . . . . . . . . . . . . . .

341

Jianbin Hu, Chao Qu, Yufeng Yu, Ma Ping, Dong Wei,

 

and Dong Dandan

 

40 Computer-Assisted Semi-Quantitative Analysis of Mouse

 

Choroidal Density . . . . . . . . . . . . . . . . . . . . . . . . . . .

349

Yun-Zheng Le

 

41Thioredoxins 1 and 2 Protect Retinal Ganglion Cells from Pharmacologically Induced Oxidative Stress, Optic Nerve

Transection and Ocular Hypertension . . . . . . . . . . . . . . . . 355 Yasunari Munemasa, Jacky M.K. Kwong, Seok H. Kim,

Jae H. Ahn, Joseph Caprioli, and Natik Piri

42 Near-Infrared Light Protect the Photoreceptor

from Light-Induced Damage in Rats . . . . . . . . . . . . . . . . 365 Chao Qu, Wei Cao, Yingchuan Fan, and Ying Lin

43BDNF Improves the Efficacy ERG Amplitude Maintenance by Transplantation of Retinal

Stem Cells in RCS Rats . . . . . . . . . . . . . . . . . . . . . . . . 375 Chunyu Tian, Chuan Chuang Weng, and Zheng Qin Yin

44 The Role of Purinergic Receptors in Retinal Function

and Disease . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 385 Michelle M. Ward , Theresa Puthussery, Kirstan A. Vessey,

and Erica L. Fletcher

Part IV Macular Degeneration

45 Fundus Autofluorescence Imaging in Age-Related

Macular Degeneration and Geographic Atrophy . . . . . . . . . . 395 Srilaxmi Bearelly and Scott W. Cousins

46 Endoplasmic Reticulum Stress as a Primary Pathogenic

Mechanism Leading to Age-Related Macular Degeneration . . . . 403 Richard T. Libby and Douglas B. Gould

47 Proteomic and Genomic Biomarkers for Age-Related

Macular Degeneration . . . . . . . . . . . . . . . . . . . . . . . . 411 Jiayin Gu, Gayle J.T. Pauer, Xiuzhen Yue, Umadevi

Narendra, Gwen M. Sturgill, James Bena, Xiaorong Gu , Neal S. Peachey, Robert G. Salomon, Stephanie A. Hagstrom, John W. Crabb, and The Clinical Genomic, and Proteomic AMD Study Group

xviii

Contents

48Impaired Intracellular Signaling May Allow Up-Regulation of CTGF-Synthesis and Secondary Peri-Retinal Fibrosis in Human Retinal Pigment

Epithelial Cells from Patients with Age-Related Macular

Degeneration . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 419 Piyush C. Kothary, Jaya Badhwar, Christina Weng,

and Monte A. Del Monte

49 PPAR Nuclear Receptors and Altered RPE Lipid

Metabolism in Age-Related Macular Degeneration . . . . . . . . 429 Goldis Malek, Peng Hu, Albert Wielgus, Mary Dwyer,

and Scott Cousins

50 The Pathophysiology of Cigarette Smoking

and Age-Related Macular Degeneration . . . . . . . . . . . . . . 437 S. S. Ni Dhubhghaill, M.T. Cahill, M. Campbell, L. Cassidy,

M.M. Humphries, and P. Humphries

51 Oxidative Stress and the Ubiquitin Proteolytic System

in Age-Related Macular Degeneration . . . . . . . . . . . . . . . . 447 Scott M. Plafker

52 Slit-Robo Signaling in Ocular Angiogenesis . . . . . . . . . . . . . 457 Haoyu Chen , Mingzhi Zhang, Shibo Tang, Nyall R. London,

Dean Y. Li, and Kang Zhang

Part V Animal Models of Retinal Degeneration

53 Evaluation of Retinal Degeneration in P27KIP1 Null Mouse . . . 467 Yumi Tokita-Ishikawa, Ryosuke Wakusawa, and Toshiaki Abe

54 Differences in Photoreceptor Sensitivity to Oxygen Stress

Between Long Evans and Sprague-Dawley Rats . . . . . . . . . . 473 Vicki Chrysostomou, Jonathan Stone, and Krisztina Valter

55 Retinal Degeneration in a Rat Model of Smith-Lemli-Opitz

Syndrome: Thinking Beyond Cholesterol Deficiency . . . . . . . . 481 Steven J. Fliesler

56 Do Calcium Channel Blockers Rescue Dying

Photoreceptors in the Pde6brd1 Mouse? . . . . . . . . . . . . . . . 491 Peter Barabas, Carolee Cutler Peck, and David Krizaj

57 Effect of PBNA on the NO Content and NOS Activity

in Ischemia/Reperfusion Injury in the Rat Retina . . . . . . . . . 501 Liangdong Li, Zhihua Huang, Hai Xiao, Xigui Chen,

and Jing Zeng

Contents

xix

58Recent Insights into the Mechanisms Underlying Light-Dependent Retinal Degeneration

 

from X. Laevis Models of Retinitis Pigmentosa . . . . . . . . . . .

509

 

Orson L. Moritz and Beatrice M. Tam

 

59

A Hypoplastic Retinal Lamination in the Purpurin Knock

 

 

Down Embryo in Zebrafish . . . . . . . . . . . . . . . . . . . . . .

517

 

Mikiko Nagashima , Junichi Saito, Kazuhiro Mawatari,

 

 

Yusuke Mori, Toru Matsukawa, Yoshiki Koriyama, and Satoru Kato

 

60

Functional Changes in Inner Retinal Neurons

 

 

in Animal Models of Photoreceptor Degeneration . . . . . . . . .

525

 

Theresa Puthussery and W. Rowland Taylor

 

61

Photoreceptor Cell Degeneration in Abcr–/– Mice . . . . . . . . . .

533

 

Li Wu, Taka Nagasaki, and Janet R. Sparrow

 

62

Investigating the Mechanism of Disease in the RP10 Form

 

 

of Retinitis Pigmentosa . . . . . . . . . . . . . . . . . . . . . . . .

541

 

Catherine J. Spellicy , Dong Xu, Garrett Cobb, Lizbeth

 

 

Hedstrom, Sara J. Bowne, Lori S. Sullivan, and Stephen P. Daiger

 

63

Congenital Stationary Night Blindness

 

 

in Mice – A Tale of Two Cacna1f Mutants . . . . . . . . . . . . . .

549

 

N. Lodha, S. Bonfield, N.C. Orton, C.J. Doering,

 

 

J.E. McRory, S.C. Mema, R. Rehak, Y. Sauvé, R. Tobias,

 

 

W.K. Stell, and N.T. Bech-Hansen

 

64

Protection of Photoreceptors in a Mouse Model of RP10 . . . . .

559

 

Lawrence C.S. Tam , Anna-Sophia Kiang, Naomi

 

 

Chadderton, Paul F. Kenna, Matthew Campbell, Marian M.

 

 

Humphries, G. Jane Farrar, and Pete Humphries

 

65

Correlation Between Tissue Docosahexaenoic Acid Levels

 

 

and Susceptibility to Light-Induced Retinal Degeneration . . . . .

567

 

Masaki Tanito , Richard S. Brush, Michael H. Elliott,

 

 

Lea D.Wicker, Kimberly R. Henry, and Robert E. Anderson

 

66

Activation of Müller Cells Occurs During Retinal

 

 

Degeneration in RCS Rats . . . . . . . . . . . . . . . . . . . . . .

575

 

Tong Tao Zhao, Chun Yu Tian, and Zheng Qin Yin

 

67

Effect of 3 -Daidzein Sulfonic Sodium on the

 

 

Anti-oxidation of Retinal Ischemia/Reperfusion Injury in Rats . .

585

 

Huang Zhihua, Li Liangdong, Li Xiao, Cheng Fang, and Zeng Jing

 

xx

Contents

68Structural and Functional Phenotyping in the Cone-Specific Photoreceptor Function Loss 1 (cpfl1)

Mouse Mutant – A Model of Cone Dystrophies . . . . . . . . . . . 593 M. Dominik Fischer , Naoyuki Tanimoto, Susanne C. Beck,

Gesine Huber, Karin Schaeferhoff, Stylianos Michalakis, Olaf Riess, Bernd Wissinger, Martin Biel, Michael Bonin, and Mathias W. Seeliger

69 The Differential Role of Jak/Stat Signaling

in Retinal Degeneration . . . . . . . . . . . . . . . . . . . . . . . . 601 C. Lange , M. Thiersch, M. Samardzija, and C. Grimm

Part VI Neuroprotection and Gene Therapy

70 Gene Therapy in the Retinal Degeneration Slow Model

of Retinitis Pigmentosa . . . . . . . . . . . . . . . . . . . . . . . . 611 Xue Cai, Shannon M. Conley, and Muna I. Naash

71 PEDF Promotes Retinal Neurosphere Formation

and Expansion In Vitro . . . . . . . . . . . . . . . . . . . . . . . . 621 Anna De Marzo , Claudia Aruta, and Valeria Marigo

72 A Multi-Stage Color Model Revisited: Implications for a

Gene Therapy Cure for Red-Green Colorblindness . . . . . . . . 631 Katherine Mancuso , Matthew C. Mauck, James A.

Kuchenbecker, Maureen Neitz, and Jay Neitz

73 Achromatopsia as a Potential Candidate for Gene Therapy . . . . 639 Ji-Jing Pang , John Alexander, Bo Lei, Wentao Deng, Keqing

Zhang, Qiuhong Li, Bo Chang, and William W. Hauswirth

74 Function and Mechanism of CNTF/LIF Signaling

in Retinogenesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . 647 Kun Do Rhee and Xian-Jie Yang

75 gp130 Activation in Müller Cells is Not Essential

for Photoreceptor Protection from Light Damage . . . . . . . . . 655 Yumi Ueki , Srinivas Chollangi, Yun-Zheng Le,

and John D. Ash

76 Neuroprotectin D1 Modulates the Induction

of Pro-Inflammatory Signaling and Promotes Retinal

Pigment Epithelial Cell Survival During Oxidative Stress . . . . . 663 Jorgelina M. Calandria and Nicolas G. Bazan

Contents

xxi

77Adeno-Associated Virus Serotype-9 Mediated Retinal Outer Plexiform Layer Transduction is Mainly Through

the Photoreceptors . . . . . . . . . . . . . . . . . . . . . . . . . .

671

Bo Lei , Keqing Zhang, Yongping Yue, Arkasubhra Ghosh,

 

and Dongsheng Duan

 

Index . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .

679