- •Биологическая химия
- •060101 – Лечебное дело
- •Часть II
- •Contents
- •I. Theoretical part
- •1. Lipids metabolism
- •1.1. Classification of lipids
- •2. Glycolipids (basically glycosphingolipids).
- •Galactosyl ceramide
- •Cholesterol
- •1.2. Digestion and absorption of fats
- •Lipolysis of triglycerides in adipose tissue
- •1.3. Fatty acids oxidation
- •2. Transport of fa inside mitochondrion.
- •3 Ketocyl CoA tyolase Palmitic acid preformed rest Palmityl-CoA Acetyl-CoA
- •Oxidation of unsaturated fatty acids
- •Violations of fatty acids oxidation
- •Acetyl-CoA metabolism
- •1.4. Lipogenesis
- •Regulation of fatty acids synthesis and break down
- •1.5. Metabolism of phospholipids
- •1.6. Essencial fatty acids. Eicosanoids
- •1.7. Cholesterol metabolism
- •Distribution and functions of cholesterol
- •Cholesterol biosynthesis
- •1. Conversion of active acetate into mevalonic acid.
- •2. Squalene formation from mevalonic acid.
- •Regulation of cholesterol synthesis
- •Cholesterol esters metabolism
- •Synthesis of bile acids
- •1.8. Regulation of lipid metabolism
- •1.9. Violations of lipid metabolism
- •Violation of fats adsorption processes:
- •Test questions
- •2. Proteins metabolism
- •2.1. Pathways of proteins degradation
- •2. Digestion of proteins.
- •The selectivity of peptidases
- •2.2. Amino acids metabolism
- •The reactions of amino groups
- •Intramolecular deamination.
- •Reactions of the carboxyl group
- •2. Aminoacyladenylate formation.
- •2.3. Ammonia neutralization in the body
- •Storage and transport of ammonia
- •Fumarate pyruvate aspartate
- •2.4. Violations of nitrogen metabolism
- •2.5. Metabolism of individual amino acids
- •2. Metabolism of sulfur amino acids.
- •3. Metabolism of branched chain amino acids.
- •Leu, Ile, Val α-keto acids acyl-CoA derivatives
- •4. Metabolism of dicarboxylic amino acids
- •5. Metabolism of diaminomonocarboxylic acids.
- •6. Metabolism of phenylalanine and tyrosine.
- •7. Metabolism of tryptophan.
- •2.6. Metabolism of conjugated proteins. Chromoproteins metabolism
- •The degradation of hemoglobin in the tissues (the formation of bile pigments)
- •The hemoglobin biosynthesis
- •2.7. Nucleoproteins metabolism
- •Adenine hypoxanthine; guanine xanthine
- •The synthesis of pyrimidine nucleotides u, c, t
- •I nosine-5'-phosphate Xantosine-5'-phosphate
- •The synthesis of deoxyribonucleotides
- •Test questions
- •3. Template biosynthesis
- •3.1. Biosynthesis of nucleic acids
- •3.1.1. Dna biosynthesis (replication)
- •Synthesis of dna in the rna template
- •3.1.2. Rna biosynthesis
- •Rna synthesis in rna template
- •3.2. Protein biosynthesis
- •The properties of the genetic code
- •Preparatory stage of protein synthesis
- •3.2.1. Translation
- •1. Initiation.
- •2. Elongation.
- •3.2.2. Post-translational modification of proteins
- •Transport of synthesized proteins through membranes
- •3.2.3. Regulation of protein biosynthesis
- •3.3. Genetic engineering
- •Test questions
- •4. Hormones, nomenclature, classification
- •Test questions
- •5. Metabolic processes interaction
- •In the organism
- •Protein and carbohydrate metabolisms interconnection
- •Protein and lipid metabolisms interconnection
- •Carbohydrate and lipid metabolisms interconnection
- •Levels of homeostasis regulation
- •Changes in metabolism during starvation
- •Test questions
- •6. Mineral and water and salt metabolism
- •6.1. Water in the human body
- •6.2. Salt metabolism
- •7. Renal biochemistry. The role of the kidneys in the regulation of water and salt metabolism
- •7.1. Excretory function of the kidneys
- •7.2. Homeostatic function of the kidneys
- •7.3. Metabolic functions of the kidneys
- •7.4. Regulation of water and salt metabolism and uropoiesis
- •Test Questions
- •8. Biochemistry of nervous tissue
- •8.1. Features of metabolism of nervous tissue
- •8.2. Mechanism of nerve impulses conduction
- •Cholinergic synapses
- •Test Questions
- •9. Biochemistry of muscle tissue
- •9.1. Chemical composition of muscle tissue
- •Sources of energy for muscle work
- •9.2. Mechanism of muscle contraction and its regulation
- •9.3. Biochemical changes in muscles within pathology
- •Test Questions
- •10. Biochemistry of extracellular matrix
- •10.1. Structure of extracellular matrix
- •Collagens.
- •Fibril-forming collagens
- •Collagen, forming a tela
- •10.2. Features of metabolism of extracellular matrix Catabolism of extracellular matrix proteins
- •Reparation of damage of the extracellular matrix in norm
- •Biochemical changes of connective tissue with aging
- •The lesions of connective tissue
- •11. Blood biochemistry
- •11.1. Respiratory function of blood. Buffer systems of blood
- •11.2. Blood coagulation system. Changes in pathology
- •Extrinsic and intrinsic pathways of blood clotting
- •Test Questions
- •12. Liver biochemistry
- •12.1. Main functions of the liver
- •The role of the liver in the metabolism of carbohydrates
- •The role of liver in lipid metabolism
- •The role of the liver in the metabolism of proteins and amino acids
- •12.2. Choleresis. Pigment metabolism. Types of jaundice
- •The cleavage of hemoglobin: hemoglobinverdoglobinbiliverdinbilirubin.
- •12.3. Detoxifying liver function
- •Test Questions
- •13. Regulation of calcium and phosphorus metabolism
- •14. Bone biochemistry
- •Test Questions
- •II. Laboratory workshop Laboratory work 1. Lipid metabolism
- •Hydrolysis of milk fat by lipase
- •Test Questions
- •Laboratory work 2. Phospholipids. Cholesterol
- •4.1. Schiff reaction.
- •4.2. Salkowski reaction.
- •4.3. Lieberman-Burchard reaction.
- •Preparation of solutions of cholesterol for the calibration curve
- •Test Questions
- •Laboratory work 3. Digestion of proteins. Determination of acids of gastric contents
- •Experiment 2. Qualitative determination of free hydrochloric acid in gastric juice using indicator congo red.
- •Results of the determination of gastric acidity
- •Test Questions
- •Laboratory work 4. The end products of nitrogen metabolism
- •Test Questions
- •Laboratory work 5. Hormones
- •2.1. Biuretic reaction.
- •2.2. Millon’s reaction.
- •2.4. Geller’s test.
- •3. Qualitative reaction to thyroxine.
- •4. Qualitative reactions to the 11-dehydro-17-oxykortikosteron (cortisone).
- •4.1. The reaction with phenylhydrazine sulfate.
- •4.2. The reaction with Fehling's reagent.
- •Test Questions
- •Laboratory work 6. Mineral and water and salt metabolism
- •1.1. Determination the pH of saliva.
- •1.2. Detection of phosphates in saliva.
- •2.1. Qualitative detection of chlorides in the urine.
- •2.2. Detection of calcium in the urine.
- •2.3. Detection of phosphates in the urine.
- •The composition of mixtures for the calibration curve
- •Test Questions
- •Laboratory work 7. Urine biochemistry
- •3.1. Qualitative detection and quantitative determination of protein in the urine.
- •3.1.1. The test by boiling in weak acid environment.
- •3.1.2. The test by boiling in an acid medium in the presence of saturated sodium chloride solution.
- •3.1.3. Geller’s test.
- •3.1.4. The test with sulfosalicylic acid.
- •3.1.5. Quantitative determination of protein in the urine by the method of dilution (Brandberg - Roberts - Stolnikov method).
- •Determination of protein in the urine using dilution method
- •3.2. Semi-quantitative method for determining glucose and ketone bodies in urine using test strips.
- •3.3. Detection of blood pigments in the urine by boiling with alkali (Geller’s test).
- •Test Questions
- •Laboratory 8. Blood biochemistry
- •1. Buffer properties of blood serum.
- •2. Quantitative determination of total protein in serum according to biuretic reaction.
- •The composition of mixtures for the ployying of the calibration curve
- •3. Determination of calcium in serum by the method of de Waard.
- •Test Questions
- •Laboratory work 9. Detection of bile pigments in urine
- •Test Questions
- •Laboratory work 10. Biochemistry of bone and connective tissue
- •1. Preparation of extracts of bone and teeth tissues.
- •Test Questions
- •Bibliography
- •Biochemistry
- •In Two Parts Part II
- •392008, Г. Тамбов, ул. Советская, 190г
А.V. Gulin
S.E. Sinyutina
А.G. Shubina
Biochemistry
In Two Parts
Part II
Tambov 2012
MINISTRY OF EDUCATION AND SCIENCE
OF THE RUSSIAN FEDERATION
FEDERAL STATE BUDGETARY
EDUCATIONAL INSTITUTION
OF HIGHER PROFESSIONAL EDUCATION
«TAMBOV STATE UNIVERSITY
NAMED AFTER G.R. DERZHAVIN»
А.V. Gulin, S.E. Sinyutina, А.G. Shubina
Biochemistry
Approved by the editors committee of
TSU named after G.R. Derzhavin as a course book
for foreign students studying medicine
Speciality 060101 – Medicine
In Two Parts
Part II
T
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Recommended for printing by the Editorial-Publishing Council of TSU named after G.R. Derzhavin |
Editors:
M.D., professor V.B. Maximenko;
M.D., professor K.I. Zasyadko
Translated by:
R.V. Salikov, M.V. Kuznetsov, D.M. Gritskov, A.P. Rogozina
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Gulin, A.V. Biochemistry : a course book for foreign students stu-dying medicine : In Two рarts. Part II / А.V. Gulin, S.Е. Sinyutina, А.G. Shubina ; Ministry of Education and Science of RF, FSBEI HPE «Tambov State University named after G.R. Derzhavin». Tambov : the Publishing House of TSU named after G.R. Derzhavin, 2012. 216 рр.
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© Gulin А.V., Sinyutina S.Е., Shubina А.G., 2012 © FSBEI HPE «Tambov State University named after G.R. Derzhavin», 2012 |
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МИНИСТЕРСТВО ОБРАЗОВАНИЯ И НАУКИ
РОССИЙСКОЙ ФЕДЕРАЦИИ
ФЕДЕРАЛЬНОЕ ГОСУДАРСТВЕННОЕ БЮДЖЕТНОЕ
ОБРАЗОВАТЕЛЬНОЕ УЧРЕЖДЕНИЕ
ВЫСШЕГО ПРОФЕССИОНАЛЬНОГО ОБРАЗОВАНИЯ
«ТАМБОВСКИЙ ГОСУДАРСТВЕННЫЙ УНИВЕРСИТЕТ
ИМЕНИ Г.Р. ДЕРЖАВИНА»
А.В. Гулин, С.Е. Синютина, А.Г. Шубина
Биологическая химия
Допущено Редакционно-издательским
советом ТГУ имени Г.Р. Державина в качестве
учебного пособия для иностранных студентов,
обучающихся по специальности
060101 – Лечебное дело
В двух частях
Часть II
Т
УДК 577.1 ББК 28.072 Г94 |
Рекомендовано к печати Редакционно-издательским советом ТГУ им. Г.Р. Державина
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Рецензенты:
доктор медицинских наук, профессор В.Б. Максименко;
доктор медицинских наук, профессор К.И. Засядько
Перевод выполнен:
Р. Саликовым, М. Кузнецовым, М. Грицковым, А. Рогозиной
Г94 |
Гулин, А.В. Биологическая химия : учебное пособие для иностранных студентов университетов, обучающихся по специальности «Лечебное дело» : в 2 ч. Ч. II / А.В. Гулин, С.Е. Синютина, А.г. Шубина ; М-во обр. и науки РФ, ФГБОУ ВПО «Тамб. гос. ун-т им. Г.Р. Державина». Тамбов : Издательский дом ТГУ им. Г.Р. Державина, 2012. 216 с.
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УДК 577.1 ББК 28.072
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© Гулин А.В., Синютина С.Е., Шубина А.Г., 2012 © ФГБОУ ВПО «Тамбовский государственный университет имени Г.Р. Державина», 2012 |
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Contents
I. THEORETICAL PART . . . . . . . . . . . . . . . . . . . . . . . . . . . |
8 |
1. Lipids metabolism. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
8 |
1.1. Classification of lipids . . . . . . . . . . . . . . . . . . . . . . . . |
8 |
1.2. Digestion and absorption of fats . . . . . . . . . . . . . . . . . |
11 |
1.3. Fatty acids oxidation. . . . . . . . . . . . . . . . . . . . . . . . . . |
14 |
1.4. Lipogenesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
19 |
1.5. Metabolism of phospholipids . . . . . . . . . . . . . . . . . . . |
21 |
1.6. Essencial fatty acids. Eicosanoids. . . . . . . . . . . . . . . . |
23 |
1.7. Cholesterol metabolism . . . . . . . . . . . . . . . . . . . . . . . |
24 |
1.8. Regulation of lipid metabolism . . . . . . . . . . . . . . . . . |
29 |
1.9. Violations of lipid metabolism. . . . . . . . . . . . . . . . . . |
30 |
|
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2. Proteins metabolism. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
33 |
2.1. Pathways of proteins degradation . . . . . . . . . . . . . . . |
34 |
2.2. Amino acids metabolism. . . . . . . . . . . . . . . . . . . . . . . |
37 |
2.3. Ammonia neutralization in the body . . . . . . . . . . . . . |
41 |
2.4. Violations of nitrogen metabolism. . . . . . . . . . . . . . . |
46 |
2.5. Metabolism of individual amino acids. . . . . . . . . . . . |
47 |
2.6 Metabolism of conjugated proteins. Chromoproteins metabolism . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
52 |
2.7. Nucleoproteins metabolism. . . . . . . . . . . . . . . . . |
55 |
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3. Template biosyntheses . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
61 |
3.1. Biosynthesis of nucleic acids . . . . . . . . . . . . . . . . . . . |
61 |
3.1.1. DNA biosynthesis (replication). . . . . . . . . . . . . . . . |
61 |
3.1.2. RNA biosynthesis. . . . . . . . . . . . . . . . . . . . . . . . . . . |
64 |
3.2. Protein biosynthesis . . . . . . . . . . . . . . . . . . . . . . . . . . |
66 |
3.2.1. Translation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
68 |
3.2.2. Post-translational modification of proteins. . . . . . . |
70 |
3.2.3. Regulation of protein biosynthesis . . . . . . . . . . . . . |
71 |
3.3. Genetic engineering . . . . . . . . . . . . . . . . . . . . . . . . . . |
74 |
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4. Hormones, nomenclature, classification . . . . . . . . . . . . . . |
81 |
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5. Metabolic processes interaction in the organism . . . . . . . |
89 |
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6. Mineral and water and salt metabolism. . . . . . . . . . . . . . . . |
95 |
6.1. Water in the human body . . . . . . . . . . . . . . . . . . . . . . |
95 |
6.2. Salt metabolism . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
98 |
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7. Renal biochemistry. The role of the kidneys in the regulation of water and salt metabolism. . . . . . . . . . . . . . . . . |
104 |
7.1. Excretory function of the kidneys. . . . . . . . . . . . . . . . |
104 |
7.2. Homeostatic function of the kidneys . . . . . . . . . . . . . |
108 |
7.3. Metabolic function of the kidneys. . . . . . . . . . . . . . . . |
109 |
7.4. Regulation of water and salt metabolism and uropoiesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
111 |
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8. Biochemistry of nervous tissue . . . . . . . . . . . . . . . . . . . . . |
115 |
8.1. Features of metabolism of nerve tissue . . . . . . . . . . . |
115 |
8.2. The mechanism of nerve impulses conduction . . . . . |
118 |
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9. Biochemistry of muscle tissue . . . . . . . . . . . . . . . . . . . . . . |
124 |
9.1. Chemical composition of muscle tissue . . . . . . . . . . . |
125 |
9.2. Mechanism of muscular contraction and its regulation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
129 |
9.3. Biochemical changes in muscles in pathology . . . . . . |
131 |
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10. Biochemistry of extracellular matrix . . . . . . . . . . . . . . . . |
133 |
10.1. Structure of extracellular matrix. . . . . . . . . . . . . . . . |
133 |
10.2. Features of metabolism of extracellular matrix. . . . . |
137 |
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11. Blood biochemistry . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
141 |
11.1. Respiratory function of blood. Buffer systems of blood . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
143 |
11.2. Blood coagulation system. Changes in pathology . . . |
148 |
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12. Liver biochemistry . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
157 |
12.1. Main functions of the liver. . . . . . . . . . . . . . . . . . . |
157 |
12.2. Choleresis. Pigment metabolism. Types of jaundice |
164 |
12.3. Detoxifying liver function. . . . . . . . . . . . . . . . . . . . . |
168 |
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13. Regulation of calcium and phosphorus metabolism. . . . . |
172 |
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14. Bone biochemistry . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
176 |
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II. LABORATORY PRACTICE . . . . . . . . . . . . . . . . . . . . . . |
182 |
Laboratory work 1. Lipid metabolism . . . . . . . . . . . . . . . . . . |
182 |
Laboratory work 2. Phospholipids. Cholesterol . . . . . . . . . . . |
185 |
Laboratory work 3. Digestion of proteins. Determination of acids of gastric contents . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
188 |
Laboratory work 4. The end products of nitrogen metabolism . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
192 |
Laboratory work 5. Hormones . . . . . . . . . . . . . . . . . . . . . . . . |
196 |
Laboratory work 6. Mineral and water and salt metabolism. . |
200 |
Laboratory work 7. Urine biochemistry . . . . . . . . . . . . . . . . . |
203 |
Laboratory work 8. Blood biochemistry . . . . . . . . . . . . . . . . |
209 |
Laboratory work 9. Detection of bile pigments in urine . . . . |
212 |
Laboratory work 10. Biochemistry of bone and connective tissue . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
213 |
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Bibliography . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . |
214 |
