
PS-2020a / part17
.pdf
DICOM PS3.17 2020a - Explanatory Information |
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</request>
<response status="200">
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fixed="299 {SERVICE}: The fuzzymatching parameter is not supported. Only literal matching has been performed." />
<representation mediaType="multipart/related; type=application/dicom+xml" /> <representation mediaType="application/dicom+json" />
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<param name="limit" style="query" /> <param name="offset" style="query" />
<param name="SOPClassUID" style="query" repeating="true" /> <param name="00080016" style="query" repeating="true" /> <param name="SOPInstanceUID" style="query" repeating="true" /> <param name="00080018" style="query" repeating="true" /> <param name="InstanceNumber" style="query" />
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<param name="SOPClassUID" style="query" repeating="true" />
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<param name="00080016" style="query" repeating="true" /> <param name="SOPInstanceUID" style="query" repeating="true" /> <param name="00080018" style="query" repeating="true" /> <param name="StudyDate" style="query" />
<param name="00080020" style="query" /> <param name="StudyTime" style="query" /> <param name="00080030" style="query" /> <param name="AccessionNumber" style="query" /> <param name="00080050" style="query" /> <param name="Modality" style="query" /> <param name="00080060" style="query" />
<param name="ModalitiesInStudy" style="query" /> <param name="00080061" style="query" />
<param name="ReferringPhysicianName" style="query" /> <param name="00080090" style="query" />
<param name="PatientName" style="query" /> <param name="00100010" style="query" /> <param name="PatientID" style="query" /> <param name="00100020" style="query" />
<param name="StudyInstanceUID" style="query" repeating="true" /> <param name="0020000D" style="query" repeating="true" />
<param name="SeriesInstanceUID" style="query" repeating="true" /> <param name="0020000E" style="query" repeating="true" />
<param name="SeriesNumber" style="query" /> <param name="00200011" style="query" /> <param name="InstanceNumber" style="query" /> <param name="00200013" style="query" />
<param name="PerformedProcedureStepStartDate" style="query" /> <param name="00400244" style="query" />
<param name="PerformedProcedureStepStartTime" style="query" /> <param name="00400245" style="query" />
<param name="RequestAttributeSequence" style="query" /> <param name="00400275" style="query" />
<param name="RequestAttributeSequence.ScheduledProcedureStepID" style="query" /> <param name="00400275.00400009" style="query" />
<param name="RequestAttributeSequence.RequestedProcedureID" style="query" /> <param name="00400275.00401001" style="query" />
<param name="includefield" style="query" repeating="true"> <option value="all" />
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<response status="200">
<param name="Warning" style="header"
fixed="299 {SERVICE}: The fuzzymatching parameter is not supported. Only literal matching has been performed." />
<representation mediaType="multipart/related; type=application/dicom+xml" /> <representation mediaType="application/dicom+json" />
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default="multipart/related; type=application/octet-stream"> <option value="multipart/related; type=application/octet-stream" /> </param>
</request>
<response status="200">
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<representation mediaType="multipart/related; type=application/octet-stream" /> </response>
<response status="400 404 406 410 503"></response> </method>
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III Ophthalmic Thickness Map Use Cases (Informative)
III.1 Introduction
Several ophthalmic devices produce thickness and/or height measurements of certain anatomical features of the posterior eye (e.g., opticnerveheadtopography,retinalthicknessmap,etc.).Themeasurementsaremappedtopographicallyasmonochromaticimages with pseudo color maps, and used extensively for diagnostic purposes by clinicians.
III.2 Macular Retinal Thickness Example
Quantitative ophthalmic OCT image analysis provides essential thickness measurement data of the retina. In the clinical practice two thicknessparametersarecommonlyused:totalretinalthickness(TR)inmacularregionandretinalnervefiberlayerthickness(RNFL) in optic nerve head (ONH) region. TR is widely applied to assess various retinal pathologies involving macula (e.g., cystoid macular edema, age-related macular degeneration, macular hole, etc.). The RNFL thickness measurement is most commonly used for glaucoma assessment.
Figure III.2-1 is an example of 2D TR map computed on a 3D OCT cube data from a healthy eye. The color bar on the left provides a color-to-thickness representation to allow interpretation of the false color coded 2D thickness map in the middle. The image on the right shows one OCT frame representing a retinal cross section along the red line (across the middle of the thickness map). TR is defined as the thickness between internal limiting membrane (white line on the OCT frame on the right) and RPE/Choroid interface (blue line on the OCT frame). These two borders are automatically detected using a segmentation algorithm applied to the entire 3D volume.
Figure III.2-1. Macular Example Mapping
III.3 RNFL Example
Figure III.3-1 is an example of a 2D RNFL map computed on a 3D OCT cube data from a healthy eye. The figure layout is the same as the previous example. The RNFL thickness is limited to the thickness of this single layer of the retina that is comprised of the ganglion cell axons that course to the optic nerve head and exit the eye as the optic nerve. Note that this image depicts a BMP mask in the center of the map where the optic nerve head (ONH) exists and no RNFL measurements can be obtained. In this example, the mask is displayed as a black area, which does not contain any thickness information (not zero micron thickness). Since the color bar representation is not relevant at the ONH, common practice is to mask it to avoid confusion or misinterpretation due to meaningless thickness data in this area.
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Figure III.3-1. RNFL Example Mapping
III.4 Diabetic Macular Edema Example
A 48 year old Navajo male with diabetes, decreased visual acuity and fundoscopic stigmata of diabetic retinopathy receives several tests to assess his likelihood of macular edema. Optical coherence tomography (OPT) is performed to assess the thickness of the retina in the macular area. This is performed with retinal thickness depicted by ophthalmic mapping. The results is an Ophthalmic ThicknessMapSOPinstancewiththeOphthalmicThicknessMappingTypeCodeSequence(0022,1436)setto"AbsoluteOphthalmic Thickness" and the Measurements Units Code Sequence (0040,08EA) in the Real World Value Mapping Macro, set to "micrometer". The OPT image is also referenced in Attribute Referenced Instance Sequence (0008,114A).
Figure III.4-1. Macula Edema Thickness Map Example
Sincethethicknessofthemaculavariesnormallybaseduponanumberofdependenciessuchasage,gender,race,etc.Interpretation of the retinal thickness in any given patient may be done in the context of normative data that accounts for these variables. The thickness data used to generate the thickness map is analyzed using a manufacturer specific algorithm for comparison to normative data relevant to this specific patient. The results of this analysis is depicted on a second thickness "map" (second SOP Instance) showing each pixel's variation from normal in terms of confidence that the variation is real and not due to chance. Specific confidence levels are then depicted by arbitrary color mapping registered to the fundus photograph. This is typically noted as the percent probab- ility that the variation is abnormal e.g., p >5%, p <5%, p <1% etc. The results is an Ophthalmic Thickness Map SOP instance with the
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OphthalmicThicknessMappingTypeCodeSequence(0022,1436)setto"Thicknessdeviationcategoryfromnormativedata".Mapping the "categories" to a code concept is accomplished via Attribute Pixel Value Mapping to Coded Concept Sequence (0022,1450).
Figure III.4-2. Macula Edema Probability Map Example
III.5 Glaucoma Example
A patient was presented with normal visual acuity OU (both eyes), intraocular pressures (IOP) of 18 mm Hg OU (both eyes), and 0.7 C/D OD (right eye) and 0.6 C/D ratio OS (left eye). Corneal pachymetry showed slight thinning in both eyes at 523µ OD (right eye) and 530µ OS (left eye). Static threshold perimetry testing showed nonspecific defects OU (both eyes) and was unreliable due to multiple fixation losses. Confocal scanning laser ophthalmoscopy produced OPM topographic representations of both optic nerves suggestive of glaucoma. The contouring of the optic nerve head (ONH) in the left eye showed a slightly enlarged cup with diffuse thinningofthesuperiorneuralrim.Intherighteye,therewasgreaterenlargementofthecupandslopingofthecupsuperior-temporally with a clear notch of the neural rim at the 12:30 position. Corneal compensated scanning laser polarimetry was performed bilaterally. Analysis of the OPM representation of the retinal nerve fiber layer (RNFL) thickness map showed moderate retinal nerve fiber loss withaccentuationatthesuperiorpolebilaterally.Thepatientwasdiagnosedwithnormaltensionglaucomaandstartedonaglaucoma medication. Follow-up examinations showed stable reduction in his IOP to 11 mm Hg OU (both eyes) and no further progression of his ONH or RNFL defects.
III.6 Retinal Thickness Definition
Using OCT technology, there are typically 2 major highly reflective bands generally visible; inner and outer highly reflective bands (IHRB and OHRB).
The inner band corresponds to the inner portion of the retina, which consists of ILM (internal limiting membrane), RNFL (retinal nerve fiber layer), GCL (ganglion cell layer), IPL (inner plexiform layer), INL (inner nuclear layer), and OPL (outer plexiform layer). In terms of the reflectivity, they present a high-low-high-low-high pattern, in general. Presumably RNFL, IPL, and OPL are the highly reflective layers and GCL and INL are of low reflectivity. ILM itself may or may not be visible in OCT images (depending on the scanning beam incidence angle), but for convenience it is used to label the vitreo-retinal interface.
The outer band is considered as the RPE (retinal pigment epithelium) /Choroid complex that consist of portion of photoreceptor, RPE, Bruch's membrane, and portion of choroid. Within the RPE/Choroid complex, there are 3 highly reflective interfaces identifiable, pre- sumably corresponding to IS/OS (photoreceptor inner/out segment junction), RPE, and Bruch's membrane.
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Clinically 3 retinal thickness measurements are generally acknowledged and utilized; RNFL thickness, GCC (ganglion cell complex) thickness, and total retinal thickness.
RNFLthicknessisdefinedasthedistancebetweenILMandouterinterfaceoftheinnermosthighlyreflectivelayerpresumablyRNFL.
GCC thickness is defined as the distance between ILM and the outer interface of the second inner highly reflective layer presumably the outer border of inner plexiform layer (IPL).
Total retinal thickness definition varies among OCT manufacturers. The classic definition is the distance between ILM and the first highlyreflectiveinterface(presumablyIS-OS)intheOHRB(Totalretinalthickness(ILMtoIS-OS)).Aseconddefinitionisthedistance between ILM and the second highly reflective interface (presumably RPE) in the OHRB (Total retinal thickness (ILM to RPE) ). A third definition is the distance between ILM and the third highly reflective interface (presumably Bruch's membrane) in the OHRB (Total retinal thickness (ILM to BM) ).
Inner highly-reflective band
Outer highly-reflective band
Figure III.6-1. Observable Layer Structures
III.7 Thickness Calculations Between Various Devices
Wheninterpretingquantitativedataobtainedfromimagingdevices,comparingmaybeanissue.Usingdifferentdevicesmanufactured bydifferentcompaniesusuallyendsupwithnon-comparablemeasurementsbecausetheyusedifferentopticsanddifferentalgorithms to make measurements.
Currently there are multiple SD-OCT devices independently manufactured, and data comparability has become problematic. When patients change doctors or otherwise receive care from more than one provider, previously acquired data may occur on different devices and become almost useless simply because the present doctor has no access to the same device. Another problem occurs with longitudinal assessments on the same device after it has undergone upgrade to a newer generation. In this case new baseline measurementsmustbeobtainedduetoincomparabilityofthedata(thishappensevenforthesamemakedifferentgenerationdevices). Attempts to normalize the measurements have been unsuccessful.
Themanufacturer,model,serialnumber,andsoftwareversioninformationareavailableintheEquipmentModule,andisveryimportant for considering the significant importance of the information to the quantitative data between various SOP Instances.
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JJJ Optical Surface Scan
JJJ.1 General Information
When supporting textures within one acquisition process, multiple series are generated. There is one Series containing the Surfaces and another containing the textures. References are used to link Instances in different series together.
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Figure JJJ.1-1. Optical Surface Scan Relationships
JJJ.2 One Single Shot Without Texture Acquisition As Point Cloud
Use cases: A single surface record of a patient is made, for example teeth, nose, or breast. If third party software does the post-pro- cessing only the point cloud needs to be stored.
The Surface Scan Point Cloud instance will be used because a point cloud is stored. A study with a single series is created.
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Figure JJJ.2-1. One Single Shot Without Texture Acquisition As Point Cloud
JJJ.3 One Single Shot With Texture Acquisition As Mesh
Use cases: A scanner device providing triangulated objects with textures, e.g., for documentation of burns or virtual autopsy.
The Surface Scan Mesh instance will be used because a triangulated object is stored. A study with two series will be created. One series contains a Surface Mesh instance and the other series a VL Photographic Image instance. The latter stores the texture, which is mapped on the surface mesh and is linked to the Surface Scan Mesh instance via the UV Mapping Sequence (0080,0008).
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Figure JJJ.3-1. One Single Shot With Texture Acquisition As Mesh
JJJ.4 Storing Modified Point Cloud With Texture As Mesh
Use cases: The surface of a textured object has been modified, for example artifacts have been manually removed after the study or surgery. The new result is stored.
In the study of the origin Surface Scan Point Cloud instance a Surface Scan Mesh instance is created in its own series containing the modified mesh. The Referenced Surface Data Sequence (0080,0013) will be used to reference the original instance. The mesh as well as the point cloud points to the texture using the Referenced Surface Data Sequence (0080,0012).
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Figure JJJ.4-1. Storing Modified Point Cloud With Texture As Mesh
JJJ.5 Multishot Without Texture As Point Clouds and Merged Mesh
Use-case: Objects, which need to be scanned from multiple points of view, such as the nose.
After the acquired point clouds have been merged by a post-processing software application, the calculated surface mesh is stored in the same study in a new series. The Referenced Surface Data Sequence (0080,0013) points to all origin Surface Scan Point Cloud instances that have been used for reconstruction. The Registration Method Code Sequence (0080,0003) is used to indicate that multiple point clouds have been merged.
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Figure JJJ.5-1. Multishot Without Texture As Point Clouds and Merged Mesh
JJJ.6 Multishot With Two Texture Per Point Cloud
Use-case: In the application field of dental procedures some products support switching between two different textures for the same surface.
In this case a number of VL Photographic Image instances are stored in the same series.
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